Bhi01G000153 (gene) Wax gourd (B227) v1

Overview


Name	Bhi01G000153
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	translation machinery-associated protein 7
Location	chr1: 4111649 .. 4113101 (-)
RNA-Seq Expression	Bhi01G000153
Synteny	Bhi01G000153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCAAGCAAGGTACGATCGATCTATTTAGCTCTTTTTCCGATTTCATCTTCGTTACGGTAGCATCATCGATTGAAATTCAAAGTTGTTGGCTGTGCTATGACATATAACGCTTCCGTTTTTGCTGATTTTAATCGTGATATGGAGAATCGATTTTGTTTTATGTCTTTTTAGGAGGGAAAGCAAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGGTATGCTTTTAATTTGTTATTTTATGGATCCACGCCACCAATCTATTTTCTTCCTGGTTCTCTTTATTTTGGATACGATTTTTGGGATCGAAGAATTTCAATCTGCCTTATAAAGTTTTGAAGGCTGTAAATGATTTCGTTGAAGTTTCAAATTAGTTATTATGGCTTAGCCTACTTTCAGGGTCTCATCAAAATTCCCCTTCTCCTCAAGGAGAATCGAAGATATATTTGAGTAACGTGTACCTGATTTTTGGGTTTGATCTTGTTTTTCCCTTTCTCATTATTATTATTATTATTAAAAGTTGAACTACAAGCATCATTGTTGTCCATTCCATTCACCTAGGAGGAAAGTTCGAGCTAAAATTATTAATGGATGCCCTCATCTGAAACCACGGTCTATTCCATTCATTGGTTATTTTTAATCAACGATTGCTTGATGAAGGGAAGATGGAGGGAACTGTAACTACCTCTCCTTAATTCGTTGTGGAGGAATTCTTTTCTGTAGTCAGCTAAGTATCCTGGCTAGGAATTATTCAGGACTATAATTTGAATTTTTTCTGGGTTTTCTCAACAGGTTGATCTGGCCAATATTCAAAAGAAGAAGGACGAGGAAAAGGTGAGAACTTAAATTTTAAAGTTGAACACTGTCGGTTTAGTTTAGAAGATACTTGGTTCTTGAATGAATGCCAACTGTTCATGTTGGTGAGTGTCCTTTTAAGTTCAACTTTTGTTAATTTTGAACCACTAGTTTTAAAAAGTGATCATTGATTCTTTCATTTTAATTTCTCTCTCATTTTTTAGATCGAGATTTTAGTATCAGTATGTATGACAATTCACTCGTTAAATTTCTTAAAATACAACCACAAATTTGTATTAAAGGGTTTTCATTGTATATAAACTTTGTTAAAATTTTGCAAATAAGAACCAAAAGGATGAAAGTACATAGACAAAAATGGAAATTTTCAAAGGATGGGAACCGATCATTTTCATAGTACAGGTCCAAAACAAACCAAAGCTGAAAGTTAGAGAAGTAGTATTTAAACATAAACTAAAACTGCACACAACTTCTTCTGGCCCATTGGTTGTGTGGAGGATTGCTACTTCTAAAGTATATTTTTGAGATTGATGATATCTACAGGCGCTCAAGGAGCTTAGAGCAAAGGCCCAACAGAAGGGAACCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGA

mRNA sequence

ATGTCGTCCAAGCAAGGAGGGAAAGCAAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGGTTGATCTGGCCAATATTCAAAAGAAGAAGGACGAGGAAAAGGCGCTCAAGGAGCTTAGAGCAAAGGCCCAACAGAAGGGAACCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGA

Coding sequence (CDS)

ATGTCGTCCAAGCAAGGAGGGAAAGCAAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGGTTGATCTGGCCAATATTCAAAAGAAGAAGGACGAGGAAAAGGCGCTCAAGGAGCTTAGAGCAAAGGCCCAACAGAAGGGAACCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGA

Protein sequence

MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK

Homology

[Close]

BLAST of Bhi01G000153 vs. TAIR 10
Match: AT1G15270.1 (Translation machinery associated TMA7 )

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-24
Identity = 58/64 (90.62%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MSSKQGGKAKPLKQPK DKK+YDE DLANIQKKKDEEKALKELRAKA QKG+FGG+GLKK
Sbjct: 1  MSSKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALKELRAKASQKGSFGGSGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Bhi01G000153 vs. TAIR 10
Match: AT3G16040.1 (Translation machinery associated TMA7 )

HSP 1 Score: 94.7 bits (234), Expect = 2.8e-20
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MSSKQGGK KPLKQPK  KK+YDE D+  +QKKKDEEKALKELRAKA QKG+FGG+GLKK
Sbjct: 1  MSSKQGGKLKPLKQPKSGKKEYDEHDMELMQKKKDEEKALKELRAKASQKGSFGGSGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Bhi01G000153 vs. ExPASy Swiss-Prot
Match: Q28GR1 (Translation machinery-associated protein 7 OS=Xenopus tropicalis OX=8364 GN=tma7 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.0e-10
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MS ++GGK KPLKQPK   KD DE ++A  QK+K+++K L E++ KA QKG   G G+KK
Sbjct: 1  MSGREGGKKKPLKQPKKSNKDMDEDEIAFKQKQKEDQKKLDEMKGKAAQKGPLTGGGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Bhi01G000153 vs. ExPASy Swiss-Prot
Match: Q4SUE2 (Translation machinery-associated protein 7 OS=Tetraodon nigroviridis OX=99883 GN=tma7 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.6e-10
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MS ++GGK KPLK PK   KD D+ D+A  QK+K+++KA++ L+A+A  KG  GG+G+KK
Sbjct: 1  MSGREGGKKKPLKAPKKQSKDMDDDDVAFKQKQKEDQKAMEALKARASGKGPLGGSGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Bhi01G000153 vs. ExPASy Swiss-Prot
Match: Q9XZS3 (Translation machinery-associated protein 7 homolog OS=Drosophila melanogaster OX=7227 GN=CG13364 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-10
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MS ++GGK KPLK PK D KD DE D+A  QK+K+++KAL+  +A A +KG   G G+KK
Sbjct: 1  MSGREGGKKKPLKAPKKDSKDLDEDDMAFKQKQKEQQKALEAAKANASKKGPLVGGGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Bhi01G000153 vs. ExPASy Swiss-Prot
Match: A1A4Q4 (Translation machinery-associated protein 7 OS=Bos taurus OX=9913 GN=TMA7 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.7e-10
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MS ++GGK KPLKQPK   K+ DE D A  QK+K+E+K L+EL+AKA  KG     G+KK
Sbjct: 1  MSGREGGKKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Bhi01G000153 vs. ExPASy Swiss-Prot
Match: Q9Y2S6 (Translation machinery-associated protein 7 OS=Homo sapiens OX=9606 GN=TMA7 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.7e-10
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MS ++GGK KPLKQPK   K+ DE D A  QK+K+E+K L+EL+AKA  KG     G+KK
Sbjct: 1  MSGREGGKKKPLKQPKKQAKEMDEEDKAFKQKQKEEQKKLEELKAKAAGKGPLATGGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Bhi01G000153 vs. NCBI nr
Match: XP_038888592.1 (translation machinery-associated protein 7-like [Benincasa hispida])

HSP 1 Score: 117.9 bits (294), Expect = 3.3e-23
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Bhi01G000153 vs. NCBI nr
Match: KGN56723.1 (hypothetical protein Csa_009747 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
           MSSKQGGKAKPLKQPKVDKKDYDEVD+AN+QKKKDEEKALKELRAKAQQKGTFGGAGLKK
Sbjct: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105

Query: 61  SGKK 65
           SGKK
Sbjct: 106 SGKK 109

[Close]

BLAST of Bhi01G000153 vs. NCBI nr
Match: KAA0049143.1 (F9L1.21 protein [Cucumis melo var. makuwa] >TYK17418.1 F9L1.21 protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
           MSSKQGGKAKPLKQPKVDKKDYDEVD+ANIQKKK+EEKALKELRAKAQQKGTFGGAGLKK
Sbjct: 42  MSSKQGGKAKPLKQPKVDKKDYDEVDMANIQKKKEEEKALKELRAKAQQKGTFGGAGLKK 101

Query: 61  SGKK 65
           SGKK
Sbjct: 102 SGKK 105

[Close]

BLAST of Bhi01G000153 vs. NCBI nr
Match: XP_022145738.1 (translation machinery-associated protein 7 [Momordica charantia])

HSP 1 Score: 114.4 bits (285), Expect = 3.7e-22
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MSSKQGGKAKPLKQPKVDKK+YDEVD+ANIQKKKDEEKAL+ELRAKAQQKGTFGGAGLKK
Sbjct: 35 MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 94

Query: 61 SGKK 65
          SGKK
Sbjct: 95 SGKK 98

[Close]

BLAST of Bhi01G000153 vs. NCBI nr
Match: XP_022980452.1 (translation machinery-associated protein 7-like [Cucurbita maxima])

HSP 1 Score: 112.5 bits (280), Expect = 1.4e-21
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
           MSSKQGGKAKPLKQPKV+KKDYDEVD+ANIQKKKDEEKAL+ELRAKAQQKG FGGAGLKK
Sbjct: 38  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 97

Query: 61  SGKK 65
           SGKK
Sbjct: 98  SGKK 101

[Close]

BLAST of Bhi01G000153 vs. ExPASy TrEMBL
Match: A0A0A0L4M8 (F9L1.21 protein OS=Cucumis sativus OX=3659 GN=Csa_3G130290 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.1e-23
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
           MSSKQGGKAKPLKQPKVDKKDYDEVD+AN+QKKKDEEKALKELRAKAQQKGTFGGAGLKK
Sbjct: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105

Query: 61  SGKK 65
           SGKK
Sbjct: 106 SGKK 109

[Close]

BLAST of Bhi01G000153 vs. ExPASy TrEMBL
Match: A0A5A7TZV6 (F9L1.21 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002810 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.9e-23
Identity = 62/64 (96.88%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
           MSSKQGGKAKPLKQPKVDKKDYDEVD+ANIQKKK+EEKALKELRAKAQQKGTFGGAGLKK
Sbjct: 42  MSSKQGGKAKPLKQPKVDKKDYDEVDMANIQKKKEEEKALKELRAKAQQKGTFGGAGLKK 101

Query: 61  SGKK 65
           SGKK
Sbjct: 102 SGKK 105

[Close]

BLAST of Bhi01G000153 vs. ExPASy TrEMBL
Match: A0A6J1CWS4 (translation machinery-associated protein 7 OS=Momordica charantia OX=3673 GN=LOC111015118 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-22
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
          MSSKQGGKAKPLKQPKVDKK+YDEVD+ANIQKKKDEEKAL+ELRAKAQQKGTFGGAGLKK
Sbjct: 35 MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 94

Query: 61 SGKK 65
          SGKK
Sbjct: 95 SGKK 98

[Close]

BLAST of Bhi01G000153 vs. ExPASy TrEMBL
Match: A0A6J1IRF0 (translation machinery-associated protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111479817 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-22
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
           MSSKQGGKAKPLKQPKV+KKDYDEVD+ANIQKKKDEEKAL+ELRAKAQQKG FGGAGLKK
Sbjct: 38  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 97

Query: 61  SGKK 65
           SGKK
Sbjct: 98  SGKK 101

[Close]

BLAST of Bhi01G000153 vs. ExPASy TrEMBL
Match: A0A6J1EBW2 (translation machinery-associated protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111431777 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-22
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVDKKDYDEVDLANIQKKKDEEKALKELRAKAQQKGTFGGAGLKK 60
           MSSKQGGKAKPLKQPKV+KKDYDEVD+ANIQKKKDEEKAL+ELRAKAQQKG FGGAGLKK
Sbjct: 45  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 104

Query: 61  SGKK 65
           SGKK
Sbjct: 105 SGKK 108

The following BLAST results are available for this feature:

BLAST of Bhi01G000153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15270.1	1.9e-24	90.63	Translation machinery associated TMA7	[more]
AT3G16040.1	2.8e-20	81.25	Translation machinery associated TMA7	[more]

BLAST of Bhi01G000153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q28GR1	2.0e-10	56.25	Translation machinery-associated protein 7 OS=Xenopus tropicalis OX=8364 GN=tma7...	[more]
Q4SUE2	2.6e-10	54.69	Translation machinery-associated protein 7 OS=Tetraodon nigroviridis OX=99883 GN...	[more]
Q9XZS3	4.4e-10	56.25	Translation machinery-associated protein 7 homolog OS=Drosophila melanogaster OX...	[more]
A1A4Q4	9.7e-10	57.81	Translation machinery-associated protein 7 OS=Bos taurus OX=9913 GN=TMA7 PE=3 SV...	[more]
Q9Y2S6	9.7e-10	57.81	Translation machinery-associated protein 7 OS=Homo sapiens OX=9606 GN=TMA7 PE=1 ...	[more]

BLAST of Bhi01G000153 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888592.1	3.3e-23	100.00	translation machinery-associated protein 7-like [Benincasa hispida]	[more]
KGN56723.1	1.3e-22	96.88	hypothetical protein Csa_009747 [Cucumis sativus]	[more]
KAA0049143.1	1.6e-22	96.88	F9L1.21 protein [Cucumis melo var. makuwa] >TYK17418.1 F9L1.21 protein [Cucumis ...	[more]
XP_022145738.1	3.7e-22	95.31	translation machinery-associated protein 7 [Momordica charantia]	[more]
XP_022980452.1	1.4e-21	93.75	translation machinery-associated protein 7-like [Cucurbita maxima]	[more]

BLAST of Bhi01G000153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4M8	6.1e-23	96.88	F9L1.21 protein OS=Cucumis sativus OX=3659 GN=Csa_3G130290 PE=4 SV=1	[more]
A0A5A7TZV6	7.9e-23	96.88	F9L1.21 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G0028...	[more]
A0A6J1CWS4	1.8e-22	95.31	translation machinery-associated protein 7 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1IRF0	6.7e-22	93.75	translation machinery-associated protein 7-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EBW2	6.7e-22	93.75	translation machinery-associated protein 7-like OS=Cucurbita moschata OX=3662 GN...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..64
None	No IPR available	PANTHER	PTHR28632:SF9	F9L1.21 PROTEIN	coord: 1..64
IPR015157	Translation machinery associated TMA7	PFAM	PF09072	TMA7	coord: 3..64 e-value: 1.8E-23 score: 83.1
IPR015157	Translation machinery associated TMA7	PANTHER	PTHR28632	TRANSLATION MACHINERY-ASSOCIATED PROTEIN 7	coord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000153	Bhi01M000153	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
molecular_function	GO:0003729	mRNA binding