MELO3C019112 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019112
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	10 kDa chaperonin family protein
Location	chr8 : 12312972 .. 12316001 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTGAACCAGTAGTAGGTTCCAAGAACCAAATGCGCTCTAAGAACTAACTTTCCACAACGCTGGAGTGATCGACTAATTTACGGAAGTACCCGCATCTCTTCACTGTCCACCAATGTCTATTTACGTAATTTAAACACTGATGGCTGCAAAACCCCCCCTCCTTAAACCCTACCTACACCATCCTTTCCTTTCTTTTAGGGTTTGAGGTTGAGATTTACTTTCTCTAATTGCTTCCAGATGGCCAAGCGTTTGCTTCCATTGCTCAATCGCGTTCTCATCGAGAAGATTGTTCCCCCTACCAAAACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCAGTAAGGTGAATCTTCCTTTTCCATCACCCTTAAAACAAAATCTTCGTTACATTGTATGGGAATTCCTCGGAATTTCGATTTTCTCCTCCAATTTTTGCTTTTCCTTTCGATTTTTTTCTTCCCGTGATTCTTCAAATTTACCACACTCAATTCTCTGGGACGACTACCCTCATTTTCGTTCATGGGTTTTTTTTTTTCTTCCTTTTCTCGTTTAATAGTTGTTTGGTGTTTGGTTTCTTGTAAGGTTGGCTTCTAGTTGGGTTTTGAGCTCATTTATTGGTATCTGATTCATTTAAAGAAGACTTGTAATATGATTTGAAAGTATGAATGTTTTCATTTCCTTCTGATTTCAGTGTTAGTGACTGTTCAGTGATACGATTTGTAACGAACTCTCTTTTTTAAGAACCATTGCTTAACACAGAAGTGGATGTAGCTGCTGAACTGTGGGCATGGGATTAATCCGATGCAATTTTTCATTTTCAGCAGAAATCTATAGTAGTTCATAAGTTCTTTTTTCTTTTTATTTTTTTCCGTGGATGAGCTTTGCTGAATAACTTTGATCTAGGGCACCTCCTTCCATCAGGATTTTTTTAGATTCAGAATGATATGACTCTTTTGCTCATGATAAGTTTAAGTAGTCCATGGATTCTGGCTTGTGTTTTATAACTTAACCTCCCTGCATTAGAAGGACTAAATTAGCAAAACCTTTATTCCTGGAAGAGTATGTGTGAGTTGTCGAAGGTGGTTGTCATGAGTCTTATGAATTTCTCGTGTTTTCATTTGCGCTTCGACTTTGAACTTCGATTTTGACGATCTTTTGTAAGATTAGATACTATCATGCATGCTGGTCTCCTTTCTCTAGTGGGCTCCCATTCTTTGGTCTTGAATTTTTTATTCTACTATATTTTTTCATTTTTTTTTTCATGTTTTTCCTCAATCAAAGTTGTTATAGAAAAATAAAGGTTGCTCTGACAGTTCGGCTTTGTTACACAATTTGTGTATCGTTTATCGTGTGCTTTTTTTCTTAATTTTGTTCCTCATCTAGCTCAACTCTGGAAAAGTTATCGCGGTTGGTCCTGGGGCTCGTGACAGAGAGGGAAAGATTATTCCTATCTCTGTAAAGGAAGGTGACATCGTCCTCCTACCAGAATATGGAGGAAATGAAGTCAAGCTGGGAGAAAAGCAGTATGTATACCTGTTCTATTGCCTTTTATATTTATTTATGTAATTTTTTGTCTGTTATTTGCTCAAGAATTTGGTTTTAAAGTTAACCTGGAAGTTGAAAATGCCCTCAATTTCTCCATGTGGCCTATTCTTTGATCGTTTTTTTAGATTTTGTTGCTCTTGAACTTGCATGCTGTGCTGAACTTTAGGCTGTATTCTGGTGTTCTCTAATC

mRNA sequence

ATGTGGTGAACCAGTAGTAGGTTCCAAGAACCAAATGCGCTCTAAGAACTAACTTTCCACAACGCTGGAGTGATCGACTAATTTACGGAAGTACCCGCATCTCTTCACTGTCCACCAATGTCTATTTACGTAATTTAAACACTGATGGCTGCAAAACCCCCCCTCCTTAAACCCTACCTACACCATCCTTTCCTTTCTTTTAGGGTTTGAGGTTGAGATTTACTTTCTCTAATTGCTTCCAGATGGCCAAGCGTTTGCTTCCATTGCTCAATCGCGTTCTCATCGAGAAGATTGTTCCCCCTACCAAAACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCAGTAAGCTCAACTCTGGAAAAGTTATCGCGGTTGGTCCTGGGGCTCGTGACAGAGAGGGAAAGATTATTCCTATCTCTGTAAAGGAAGGTGACATCGTCCTCCTACCAGAATATGGAGGAAATGAAGTCAAGCTGGGAGAAAAGCAGTATGTATACCTGTTCTATTGCCTTTTATATTTATTTATGTAATTTTTTGTCTGTTATTTGCTCAAGAATTTGGTTTTAAAGTTAACCTGGAAGTTGAAAATGCCCTCAATTTCTCCATGTGGCCTATTCTTTGATCGTTTTTTTAGATTTTGTTGCTCTTGAACTTGCATGCTGTGCTGAACTTTAGGCTGTATTCTGGTGTTCTCTAATC

Coding sequence (CDS)

ATGGCCAAGCGTTTGCTTCCATTGCTCAATCGCGTTCTCATCGAGAAGATTGTTCCCCCTACCAAAACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCAGTAAGCTCAACTCTGGAAAAGTTATCGCGGTTGGTCCTGGGGCTCGTGACAGAGAGGGAAAGATTATTCCTATCTCTGTAAAGGAAGGTGACATCGTCCTCCTACCAGAATATGGAGGAAATGAAGTCAAGCTGGGAGAAAAGCAGTATGTATACCTGTTCTATTGCCTTTTATATTTATTTATGTAA

Protein sequence

MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISVKEGDIVLLPEYGGNEVKLGEKQYVYLFYCLLYLFM*

Homology

[Close]

BLAST of MELO3C019112 vs. Swiss-Prot
Match: CH10_ARATH (10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-30
Identity = 60/83 (72.29%), Postives = 72/83 (86.75%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          M KRL+P  NR+L+++++ P KT SGILLPEKSSKLNSGKVIAVGPG+RD++GK+IP+SV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQY 84
          KEGD VLLPEYGG +VKLGE +Y
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEY 83

[Close]

BLAST of MELO3C019112 vs. Swiss-Prot
Match: CH10_BRANA (10 kDa chaperonin OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-30
Identity = 60/83 (72.29%), Postives = 73/83 (87.95%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          M KRL+P  NR+L++ ++ P KT SGILLPEK+SKLNSGKVIAVGPG+RD++GK+IP+SV
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQY 84
          KEGD VLLPEYGG +VKLGEK+Y
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEY 83

[Close]

BLAST of MELO3C019112 vs. Swiss-Prot
Match: CH10_SCHPO (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hsp10 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 8.2e-18
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 1


Query: 2  AKRLLPLLNRVLIEKIVPPTKTNSGILLPEKS-SKLNSGKVIAVGPGARDREGKIIPISV 61
          AK ++PLL+R+L+++I   TKT SGI LPEKS  KL+ G+VI+VG G  ++EGK+   SV
Sbjct: 8  AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSV 67

Query: 62 KEGDIVLLPEYGGNEVKLGEKQY 84
            GD VLLP YGG+ +K+GE++Y
Sbjct: 68 AVGDRVLLPAYGGSNIKVGEEEY 90

[Close]

BLAST of MELO3C019112 vs. Swiss-Prot
Match: CH10_ORYLA (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.7e-16
Identity = 42/86 (48.84%), Postives = 62/86 (72.09%), Query Frame = 1


Query: 3  KRLLPLLNRVLIEKIVPPTKTNSGILLPEKSS-KLNSGKVIAVGPGARDREGKIIPISVK 62
          ++ LPL +RVL+E+++  T T  GI+LPEKS  K+    V+AVGPG+ +++G++ P+SVK
Sbjct: 4  RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVK 63

Query: 63 EGDIVLLPEYGGNEVKLGEKQYVYLF 88
           G+ VLLP+YGG +V L +K Y +LF
Sbjct: 64 VGEKVLLPQYGGTKVVLEDKDY-FLF 88

[Close]

BLAST of MELO3C019112 vs. Swiss-Prot
Match: CH10_YEAST (10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSP10 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-15
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 1


Query: 2  AKRLLPLLNRVLIEKIVPPTKTNSGILLPEKS-SKLNSGKVIAVGPGARDREGKIIPISV 61
          AK ++PL++RVL+++I    KT SG+ LPEK+  KLN  +V+AVGPG  D  G  +   V
Sbjct: 8  AKSIVPLMDRVLVQRIKAQAKTASGLYLPEKNVEKLNQAEVVAVGPGFTDANGNKVVPQV 67

Query: 62 KEGDIVLLPEYGGNEVKLGEKQYVYLF 88
          K GD VL+P++GG+ +KLG    V LF
Sbjct: 68 KVGDQVLIPQFGGSTIKLGNDDEVILF 94

[Close]

BLAST of MELO3C019112 vs. TrEMBL
Match: A0A0A0KYT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G426760 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.2e-37
Identity = 83/87 (95.40%), Postives = 86/87 (98.85%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKS+KLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQYVYLF 88
          KEGD+VLLPEYGGNEVKLGEKQ+ YLF
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQF-YLF 86

[Close]

BLAST of MELO3C019112 vs. TrEMBL
Match: M0TSH4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.8e-32
Identity = 68/83 (81.93%), Postives = 80/83 (96.39%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+PL NRVL+EKIVPP+KT++GILLPEK++KLNSGKV+AVGPGARDR+GK+IP+SV
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTSAGILLPEKTTKLNSGKVVAVGPGARDRDGKLIPVSV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQY 84
          KEGD VLLPEYGG EVKLGEK+Y
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKEY 83

[Close]

BLAST of MELO3C019112 vs. TrEMBL
Match: A0A059D9Z0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03754 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-32
Identity = 69/83 (83.13%), Postives = 80/83 (96.39%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVLIEKIVPP+KTN+GILLPEK++KLNSGKV+AVGPGARD++GKIIP+SV
Sbjct: 1  MAKRLIPTLNRVLIEKIVPPSKTNTGILLPEKTTKLNSGKVMAVGPGARDKDGKIIPVSV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQY 84
          KEG+ VLLPEYGG EVKLGEK+Y
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKEY 83

[Close]

BLAST of MELO3C019112 vs. TrEMBL
Match: A0A103XSU5_CYNCS (Chaperonin Cpn10 OS=Cynara cardunculus var. scolymus GN=Ccrd_001673 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-32
Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVL+EKIVPP+KT +GILLPEKSSKLNSGKV+AVGPG RD  G  IP++V
Sbjct: 1  MAKRLIPCLNRVLVEKIVPPSKTTAGILLPEKSSKLNSGKVVAVGPGTRDNSGNTIPVAV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQYVYLFYCLLYL 94
          KEGD VLLPEYGG EVKLGEK+YV+  +  LY+
Sbjct: 61 KEGDTVLLPEYGGMEVKLGEKEYVFPLFSYLYM 93

[Close]

BLAST of MELO3C019112 vs. TrEMBL
Match: D7T1A7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02550 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.0e-32
Identity = 65/83 (78.31%), Postives = 81/83 (97.59%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNR+L+EKIVPP+KTN+GILLPEK+++LNSGKV+AVGPGARDR+GK+IP+SV
Sbjct: 1  MAKRLIPTLNRILVEKIVPPSKTNAGILLPEKTAQLNSGKVVAVGPGARDRDGKLIPLSV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQY 84
          +EGD VLLPEYGGN+VKLG+K+Y
Sbjct: 61 REGDTVLLPEYGGNQVKLGDKEY 83

[Close]

BLAST of MELO3C019112 vs. TAIR10
Match: AT1G23100.1 (AT1G23100.1 GroES-like family protein)

HSP 1 Score: 136.7 bits (343), Expect = 7.4e-33
Identity = 65/84 (77.38%), Postives = 76/84 (90.48%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVL+EKI+PP+KT SGILLPEKSS+LNSG+VIAVGPGARDR G +IP+SV
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQYV 85
          KEGD VLLPE+GG +VKLGEK+++
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFL 84

[Close]

BLAST of MELO3C019112 vs. TAIR10
Match: AT1G14980.1 (AT1G14980.1 chaperonin 10)

HSP 1 Score: 133.7 bits (335), Expect = 6.2e-32
Identity = 60/83 (72.29%), Postives = 72/83 (86.75%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          M KRL+P  NR+L+++++ P KT SGILLPEKSSKLNSGKVIAVGPG+RD++GK+IP+SV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQY 84
          KEGD VLLPEYGG +VKLGE +Y
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEY 83

[Close]

BLAST of MELO3C019112 vs. TAIR10
Match: AT5G20720.1 (AT5G20720.1 chaperonin 20)

HSP 1 Score: 62.0 bits (149), Expect = 2.3e-10
Identity = 36/76 (47.37%), Postives = 43/76 (56.58%), Query Frame = 1


Query: 3   KRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNS-GKVIAVGPGARDREGKIIPISVK 62
           K L PL +RV I+      KT  G+LL E + +  S G VIAVGPG+ D EGKI P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDIVLLPEYGGNEVK 78
            G  VL  +Y GN+ K
Sbjct: 218 TGSTVLYSKYAGNDFK 233

[Close]

BLAST of MELO3C019112 vs. NCBI nr
Match: gi|659111415|ref|XP_008455733.1| (PREDICTED: 10 kDa chaperonin-like [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 9.4e-38
Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQYVYLF 88
          KEGDIVLLPEYGGNEVKLGEKQ+ YLF
Sbjct: 61 KEGDIVLLPEYGGNEVKLGEKQF-YLF 86

[Close]

BLAST of MELO3C019112 vs. NCBI nr
Match: gi|449453157|ref|XP_004144325.1| (PREDICTED: 10 kDa chaperonin-like [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 4.6e-37
Identity = 83/87 (95.40%), Postives = 86/87 (98.85%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKS+KLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQYVYLF 88
          KEGD+VLLPEYGGNEVKLGEKQ+ YLF
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQF-YLF 86

[Close]

BLAST of MELO3C019112 vs. NCBI nr
Match: gi|743785975|ref|XP_010922052.1| (PREDICTED: 10 kDa chaperonin-like isoform X1 [Elaeis guineensis])

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-32
Identity = 67/83 (80.72%), Postives = 80/83 (96.39%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVL+EKIVPP+KTNSGILLPEK++KLNSGKV+AVGPGARDR+G ++P+SV
Sbjct: 1  MAKRLIPCLNRVLVEKIVPPSKTNSGILLPEKTTKLNSGKVVAVGPGARDRDGNLVPVSV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQY 84
          KEGD+VLLPEYGG EVKLG+K+Y
Sbjct: 61 KEGDVVLLPEYGGTEVKLGDKEY 83

[Close]

BLAST of MELO3C019112 vs. NCBI nr
Match: gi|695052315|ref|XP_009414211.1| (PREDICTED: 10 kDa chaperonin-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 146.4 bits (368), Expect = 2.6e-32
Identity = 68/83 (81.93%), Postives = 80/83 (96.39%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+PL NRVL+EKIVPP+KT++GILLPEK++KLNSGKV+AVGPGARDR+GK+IP+SV
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTSAGILLPEKTTKLNSGKVVAVGPGARDRDGKLIPVSV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQY 84
          KEGD VLLPEYGG EVKLGEK+Y
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKEY 83

[Close]

BLAST of MELO3C019112 vs. NCBI nr
Match: gi|976909061|gb|KVH96244.1| (Chaperonin Cpn10 [Cynara cardunculus var. scolymus])

HSP 1 Score: 145.6 bits (366), Expect = 4.5e-32
Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVL+EKIVPP+KT +GILLPEKSSKLNSGKV+AVGPG RD  G  IP++V
Sbjct: 1  MAKRLIPCLNRVLVEKIVPPSKTTAGILLPEKSSKLNSGKVVAVGPGTRDNSGNTIPVAV 60

Query: 61 KEGDIVLLPEYGGNEVKLGEKQYVYLFYCLLYL 94
          KEGD VLLPEYGG EVKLGEK+YV+  +  LY+
Sbjct: 61 KEGDTVLLPEYGGMEVKLGEKEYVFPLFSYLYM 93

The following BLAST results are available for this feature:

BLAST of MELO3C019112 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CH10_ARATH	1.1e-30	72.29	10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1	[more]
CH10_BRANA	1.9e-30	72.29	10 kDa chaperonin OS=Brassica napus PE=3 SV=1	[more]
CH10_SCHPO	8.2e-18	54.22	10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
CH10_ORYLA	7.7e-16	48.84	10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1	[more]
CH10_YEAST	1.3e-15	48.28	10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of MELO3C019112 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYT6_CUCSA	3.2e-37	95.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G426760 PE=3 SV=1	[more]
M0TSH4_MUSAM	1.8e-32	81.93	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
A0A059D9Z0_EUCGR	3.1e-32	83.13	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03754 PE=3 SV=1	[more]
A0A103XSU5_CYNCS	3.1e-32	74.19	Chaperonin Cpn10 OS=Cynara cardunculus var. scolymus GN=Ccrd_001673 PE=3 SV=1	[more]
D7T1A7_VITVI	7.0e-32	78.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02550 PE=3 SV=...	[more]

BLAST of MELO3C019112 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23100.1	7.4e-33	77.38	GroES-like family protein	[more]
AT1G14980.1	6.2e-32	72.29	chaperonin 10	[more]
AT5G20720.1	2.3e-10	47.37	chaperonin 20	[more]

BLAST of MELO3C019112 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111415\|ref\|XP_008455733.1\|	9.4e-38	97.70	PREDICTED: 10 kDa chaperonin-like [Cucumis melo]	[more]
gi\|449453157\|ref\|XP_004144325.1\|	4.6e-37	95.40	PREDICTED: 10 kDa chaperonin-like [Cucumis sativus]	[more]
gi\|743785975\|ref\|XP_010922052.1\|	1.5e-32	80.72	PREDICTED: 10 kDa chaperonin-like isoform X1 [Elaeis guineensis]	[more]
gi\|695052315\|ref\|XP_009414211.1\|	2.6e-32	81.93	PREDICTED: 10 kDa chaperonin-like [Musa acuminata subsp. malaccensis]	[more]
gi\|976909061\|gb\|KVH96244.1\|	4.5e-32	74.19	Chaperonin Cpn10 [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011032	GroES-like_sf
IPR018369	Chaprnonin_Cpn10_CS
IPR020818	Chaperonin_GroES
IPR011032	GroES-like_sf
IPR018369	Chaprnonin_Cpn10_CS
IPR020818	Chaperonin_GroES

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm
GO:0005737	cytoplasm

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0051085	chaperone mediated protein folding requiring cofactor
biological_process	GO:0006986	response to unfolded protein
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051082	unfolded protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU47353	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019112T1	MELO3C019112T1	mRNA
MELO3C019112T2	MELO3C019112T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU47353	MU47353	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011032	GroES-like	unknown	SSF50129	GroES-like	coord: 3..96 score: 1.18
IPR018369	Chaperonin GroES, conserved site	PROSITE	PS00681	CHAPERONINS_CPN10	coord: 5..29 scor
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 5..20 score: 2.0E-15coord: 26..47 score: 2.0E-15coord: 82..95 score: 2.0E-15coord: 61..73 score: 2.0
IPR020818	GroES chaperonin family	GENE3D	G3DSA:2.30.33.40		coord: 4..95 score: 1.2
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..97 score: 1.7
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 6..94 score: 8.1
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 4..95 score: 5.3
None	No IPR available	PANTHER	PTHR10772:SF8	10 KDA CHAPERONIN	coord: 1..97 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019112	Csa4G426760	Cucumber (Chinese Long) v2	cumeB272
MELO3C019112	Cla012094	Watermelon (97103) v1	mewmB577
MELO3C019112	ClCG04G005740	Watermelon (Charleston Gray)	mewcgB527
MELO3C019112	Cla97C04G072300	Watermelon (97103) v2	mewmbB535
MELO3C019112	Bhi03G002060	Wax gourd	mewgoB641
MELO3C019112	CSPI04G18990	Wild cucumber (PI 183967)	cpimeB331
MELO3C019112	Cucsa.358500	Cucumber (Gy14) v1	cgymeB578
MELO3C019112	CmaCh07G010950	Cucurbita maxima (Rimu)	cmameB802
MELO3C019112	CmoCh07G011440	Cucurbita moschata (Rifu)	cmomeB786
MELO3C019112	Cp4.1LG19g02510	Cucurbita pepo (Zucchini)	cpemeB461
MELO3C019112	CsGy4G017990	Cucumber (Gy14) v2	cgybmeB286
MELO3C019112	Carg13312	Silver-seed gourd	carmeB0585
MELO3C019112	CsaV3_4G029380	Cucumber (Chinese Long) v3	cucmeB337

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019112	Cucurbita maxima (Rimu)	cmameB612
MELO3C019112	Bottle gourd (USVL1VR-Ls)	lsimeB158