Cucsa.358500 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.358500
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	10 kDa chaperonin family protein
Location	scaffold03586 : 65712 .. 68733 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAACTTACCAGAACGCTGGAGGGGATTTGCTAAATACGAAAGTACCCACAAAACTTCATGGTCCACCAATGTCTATTTACGTAATTTAAACATTGAaGGGTGAAGGCTGCAAAAACCCCTCCTAAACCCTAGACCATTCTTTGTTTTAGGGTTTGAAGTTGAGATTCATTTTCTCTGATTGCTTCAGATGGCTAAACGTTTGCTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTTCCCCCTACCAAGACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCACTAAGGTGAATCTTCCTTCCCTCTCTCCCCCATTTCTTTTTCCATTTCCCTTCAAACAAAATGTTCGTTACTTTGTATGGAATTCGTCGGAAATTCCATTTCCCCTTtCCTTTTCGTTGTTTTCTTACCCTGATTCTCGAAATTTGCGACACTGAATTCTCTGGGACGACTACACTCGTTTTCTTTCATGGGTATTCTTCTAGTGTCATTTCCGTTTATGCCTATTTtCTTTTTTtGCCTTTTCTCGTTTAATAGTTACTTGGGTTTTTTAGCTCATTTATTGGTTCTCTGATTCATTTCAATATTAACCTATTTAAAGAAGACTTTTAATGTGAATGTTTTCATTTCTTCCTGATTTCAGTGTTAGCGAATGTTCAGTGATGCGATTTGTAACAAACTTTCTCTTTTTTAAGAACGATTGCTTAACAGTTAACGTAGATGTGGATGTAGCTGCTGAACTGTGTGCATGGGATTAATCCGATGCGATCTTTTATTTATTTATTTATTTTCAGCAGAAATCTATATTAGTTCATAAGGATTTTTTTTttCCGTGGATGAGCTTTGCTGAATAACTTTGATTTAGGGGCCCTTCCTTCCATCAGGATTTTTTTAGATTCAGAATGATTCGACTATTTTGCTCATGATAAGTTTAAGTAGTCCATGGATTCTGGCTTGTGTTTTATAACTTAACTCCCTGCATTAGAAGGACTAAATTAGCAAAACCTTTCTTCCTGGAATAGTATTTCTGAGTTGTCGAAGGTGGTTGTTATGAGTCTTATGTTTTCATTTTGCATTTTGAAGAGTTTTTGTAAGGTTAGATACTATCATGCATGGTTGGGTCCCCTTTCTCTAGTGGGCTCCCATTTTTTGGTTGAATTTTTTATGCTACTATATCTTTTCATTTTTTTCCTCAATCAAAGTTGTTATAGAAGAAAAAAAGTTGTTGTGACAGTTCAGCTCAGCTTTGTTACTCAATTTGTGGATGTTTATCGTGTCTTTTTTACTTATTTTTGTTCCTCAACTAGCTCAACTCTGGAAAAGTTATCGCTGTTGGTCCTGGGGCTCGTGACAGAGAGGGAAAGATTATTCCTATCTCTGTAAAGGAAGGTGACATGGTTCTCCTACCAGAATATGGAGGAAATGAAGTCAAGCTTGGAGAAAAGCAGTATGTATACCTGTTCTATTGCTTTATTTATTTAGTTTTTGTCTGTTATTTGATCAAGAATTTGGTTTTAAAGTTAACCTGGAAGTTGAAGTGCCCTCAATTTCTCCATATGGCCTAGTCTTTGATCGTTTTTTAAGATTTTGTTGCTCTTGAACTTGCATGCTGTGCTGAACTTTTGGCTGTATTCTGGTGTTGTCAAATTTTTTTGTTGTTGACCGGTTTACTCTGGCTTGGTCAATTCACGGTTATCTTTGATGTGTCAAGAAATTTTTTTTtATTGTTTGGTACTGCATTATCAGCTGTTTGCTAAGACCTTGAAAACTAGTTTTGATGGTTCTCATCAGCAGTTGGGTTGGGTTAGACTAGACTGTTGTCGATTGCTTTGAGTTAGAATAGTCAGCTATAGGGATTGCCTTGTTTTAATAACTCTAAGCATTGTGTCAGTTAACTTTTCCATGAACAAAGAACAAAACCATAAATCTACAATAATGTATTTTTTTTtGTTCTGAAATTCTGATTTAAATTCAACGCTAACTTGAGGCTGCTGATGCTGGATATGGAGACATAAGCTCAGTAACTGTAATTACTTACGAATTTAGACTATTATTGAATTATCTTCCACCCTTTGGTAGGCCGTTTAATGATCTTTGTGTAAAGGTTAAATATATGTTTTATCCCTCAGTTTTGGTTAAAGATTTTTCTAGTTAATCCTTAACATGTTAAAAATTTTCAATTATAACCTTTATGTTAAGTGTATGTTATATCTCATTACATATAGTTGATGGTAAGTTTATGTGATATGGTACTTGTTGGGTTAGTAGAATTTTATGAAAGGATTCAAGTCATATAAGACTATAAGAGGAAATTTTCTAAGTAGACATCATTTTCGCTCCTTAACCCTCAGTTTTCACTCCAAATTTTTGCCAATTGACCAAGTGTCATGGCACCTATTCTGATAATTAACCATAATTACTAACGAAAGTGGTAAACATAAAGACCACATTGGAAACATTTGAATTGAAACGAGGACCAAATTGAAATAATATGCAACAAACATGAAGCACTGAAACATACATCTAGTCTTTTATTCAAATACAAGTCCCTTGTGTTGACAATTCGGATTGGCCACTTTTCTTTTATTTGGAGGGCTGTTTCTTCTCTCTACTTAATTGCTGGTGAATGATTTTGTCGTTTGATTTCAGGTTCTATCTATTCCGCGACGAAGATCTATTAGGAACACTTCATGATTGATTGATCTTGTGAAAGTTGGAATGTTTTTCCAAGTCTTAAGCTTCGAGATCTAGAGAGCTATTTTCTGTTGTTTTTACTTGAGTGAGACTTTGATAACATATATTTACGGTCAGAAGACAAAATATTATATGAATTTTTGGTATTTCTCACTCAAACATTTTTTAGGAATCTTGTACGATTGTTGTGCTATTTCTACTTTACCTCATGTCTGACTATAGAGATATATTGATTTGGGTGTGAGATAATTAGTTCAAAATGGTTTTTTGATTTAAAGATATGGGAGCACTTTGAAATTGAATCAATGAAATAATTTTCAA

mRNA sequence

AAGAACTTACCAGAACGCTGGAGGGGATTTGCTAAATACGAAAGTACCCACAAAACTTCATGGTCCACCAATGTCTATTTACGTAATTTAAACATTGAAGGGTGAAGGCTGCAAAAACCCCTCCTAAACCCTAGACCATTCTTTGTTTTAGGGTTTGAAGTTGAGATTCATTTTCTCTGATTGCTTCAGATGGCTAAACGTTTGCTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTTCCCCCTACCAAGACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCACTAAGCTCAACTCTGGAAAAGTTATCGCTGTTGGTCCTGGGGCTCGTGACAGAGAGGGAAAGATTATTCCTATCTCTGTAAAGGAAGGTGACATGGTTCTCCTACCAGAATATGGAGGAAATGAAGTCAAGCTTGGAGAAAAGCAGTTCTATCTATTCCGCGACGAAGATCTATTAGGAACACTTCATGATTGATTGATCTTGTGAAAGTTGGAATGTTTTTCCAAGTCTTAAGCTTCGAGATCTAGAGAGCTATTTTCTGTTGTTTTTACTTGAGTGAGACTTTGATAACATATATTTACGGTCAGAAGACAAAATATTATATGAATTTTTGGTATTTCTCACTCAAACATTTTTTAGGAATCTTGTACGATTGTTGTGCTATTTCTACTTTACCTCATGTCTGACTATAGAGATATATTGATTTGGGTGTGAGATAATTAGTTCAAAATGGTTTTTTGATTTAAAGATATGGGAGCACTTTGAAATTGAATCAATGAAATAATTTTCAA

Coding sequence (CDS)

ATGGCTAAACGTTTGCTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTTCCCCCTACCAAGACCAATTCCGGCATTTTGCTTCCTGAGAAGTCCACTAAGCTCAACTCTGGAAAAGTTATCGCTGTTGGTCCTGGGGCTCGTGACAGAGAGGGAAAGATTATTCCTATCTCTGTAAAGGAAGGTGACATGGTTCTCCTACCAGAATATGGAGGAAATGAAGTCAAGCTTGGAGAAAAGCAGTTCTATCTATTCCGCGACGAAGATCTATTAGGAACACTTCATGATTGA

Protein sequence

MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISVKEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD*

Homology

[Close]

BLAST of Cucsa.358500 vs. Swiss-Prot
Match: CH10_ARATH (10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.8e-37
Identity = 69/97 (71.13%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          M KRL+P  NR+L+++++ P KT SGILLPEKS+KLNSGKVIAVGPG+RD++GK+IP+SV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPEYGG +VKLGE +++LFRDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Cucsa.358500 vs. Swiss-Prot
Match: CH10_BRANA (10 kDa chaperonin OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.7e-37
Identity = 69/97 (71.13%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          M KRL+P  NR+L++ ++ P KT SGILLPEK++KLNSGKVIAVGPG+RD++GK+IP+SV
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPEYGG +VKLGEK+++LFRDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Cucsa.358500 vs. Swiss-Prot
Match: CH10_SCHPO (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hsp10 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.1e-21
Identity = 49/97 (50.52%), Postives = 72/97 (74.23%), Query Frame = 1


Query: 2   AKRLLPLLNRVLIEKIVPPTKTNSGILLPEKST-KLNSGKVIAVGPGARDREGKIIPISV 61
           AK ++PLL+R+L+++I   TKT SGI LPEKS  KL+ G+VI+VG G  ++EGK+   SV
Sbjct: 8   AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSV 67

Query: 62  KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
             GD VLLP YGG+ +K+GE+++ L+RD +LL  + +
Sbjct: 68  AVGDRVLLPAYGGSNIKVGEEEYSLYRDHELLAIIKE 104

[Close]

BLAST of Cucsa.358500 vs. Swiss-Prot
Match: CH10_ORYLA (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.1e-20
Identity = 47/96 (48.96%), Postives = 71/96 (73.96%), Query Frame = 1


Query: 3  KRLLPLLNRVLIEKIVPPTKTNSGILLPEKST-KLNSGKVIAVGPGARDREGKIIPISVK 62
          ++ LPL +RVL+E+++  T T  GI+LPEKS  K+    V+AVGPG+ +++G++ P+SVK
Sbjct: 4  RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVK 63

Query: 63 EGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
           G+ VLLP+YGG +V L +K ++LFRD D+LG   D
Sbjct: 64 VGEKVLLPQYGGTKVVLEDKDYFLFRDADILGKYVD 99

[Close]

BLAST of Cucsa.358500 vs. Swiss-Prot
Match: CH10_MOUSE (10 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 4.0e-20
Identity = 49/96 (51.04%), Postives = 66/96 (68.75%), Query Frame = 1


Query: 3   KRLLPLLNRVLIEKIVPPTKTNSGILLPEKST-KLNSGKVIAVGPGARDREGKIIPISVK 62
           ++ LPL +RVL+E+    T T  GI+LPEKS  K+    V+AVG G + + G+I P+SVK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVK 66

Query: 63  EGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
            GD VLLPEYGG +V L +K ++LFRD D+LG   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKYVD 102

[Close]

BLAST of Cucsa.358500 vs. TrEMBL
Match: A0A0A0KYT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G426760 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 97

[Close]

BLAST of Cucsa.358500 vs. TrEMBL
Match: A0A059D9Z0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03754 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 7.1e-40
Identity = 80/97 (82.47%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVLIEKIVPP+KTN+GILLPEK+TKLNSGKV+AVGPGARD++GKIIP+SV
Sbjct: 1  MAKRLIPTLNRVLIEKIVPPSKTNTGILLPEKTTKLNSGKVMAVGPGARDKDGKIIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEG+ VLLPEYGG EVKLGEK+++L+RDED+LGTLHD
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKEYHLYRDEDILGTLHD 97

[Close]

BLAST of Cucsa.358500 vs. TrEMBL
Match: D7T1A7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02550 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.0e-39
Identity = 75/97 (77.32%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNR+L+EKIVPP+KTN+GILLPEK+ +LNSGKV+AVGPGARDR+GK+IP+SV
Sbjct: 1  MAKRLIPTLNRILVEKIVPPSKTNAGILLPEKTAQLNSGKVVAVGPGARDRDGKLIPLSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          +EGD VLLPEYGGN+VKLG+K+++LFRD+D+LGTLHD
Sbjct: 61 REGDTVLLPEYGGNQVKLGDKEYHLFRDDDILGTLHD 97

[Close]

BLAST of Cucsa.358500 vs. TrEMBL
Match: M0TSH4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-38
Identity = 77/97 (79.38%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+PL NRVL+EKIVPP+KT++GILLPEK+TKLNSGKV+AVGPGARDR+GK+IP+SV
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTSAGILLPEKTTKLNSGKVVAVGPGARDRDGKLIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPEYGG EVKLGEK+++L+RD+D+LGTL D
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKEYHLYRDDDILGTLCD 97

[Close]

BLAST of Cucsa.358500 vs. TrEMBL
Match: B9GG69_POPTR (10 kDa chaperonin family protein OS=Populus trichocarpa GN=POPTR_0001s28090g PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.9e-38
Identity = 72/97 (74.23%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P  NR+L+EKI+PP+KTNSGILLPEK++KLNSGKV+AVGPGARD++GK+IP+++
Sbjct: 1  MAKRLIPTFNRILVEKIIPPSKTNSGILLPEKTSKLNSGKVVAVGPGARDKDGKLIPVTL 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEG+ VLLPEYGG EVKLGEK+++L+RDED++GTLHD
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKEYFLYRDEDIMGTLHD 97

[Close]

BLAST of Cucsa.358500 vs. TAIR10
Match: AT1G23100.1 (AT1G23100.1 GroES-like family protein)

HSP 1 Score: 156.4 bits (394), Expect = 9.2e-39
Identity = 73/97 (75.26%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVL+EKI+PP+KT SGILLPEKS++LNSG+VIAVGPGARDR G +IP+SV
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPE+GG +VKLGEK+F L+RDED++ TLH+
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLHE 97

[Close]

BLAST of Cucsa.358500 vs. TAIR10
Match: AT1G14980.1 (AT1G14980.1 chaperonin 10)

HSP 1 Score: 155.6 bits (392), Expect = 1.6e-38
Identity = 69/97 (71.13%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          M KRL+P  NR+L+++++ P KT SGILLPEKS+KLNSGKVIAVGPG+RD++GK+IP+SV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD VLLPEYGG +VKLGE +++LFRDED+LGTLH+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97

[Close]

BLAST of Cucsa.358500 vs. TAIR10
Match: AT5G20720.1 (AT5G20720.1 chaperonin 20)

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-10
Identity = 40/95 (42.11%), Postives = 53/95 (55.79%), Query Frame = 1


Query: 3   KRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNS-GKVIAVGPGARDREGKIIPISVK 62
           K L PL +RV I+      KT  G+LL E + +  S G VIAVGPG+ D EGKI P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDMVLLPEYGGNEVKLGEKQFYL-FRDEDLLGTL 96
            G  VL  +Y GN+ K  +   Y+  R  D++  L
Sbjct: 218 TGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252

[Close]

BLAST of Cucsa.358500 vs. NCBI nr
Match: gi|449453157|ref|XP_004144325.1| (PREDICTED: 10 kDa chaperonin-like [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 97

[Close]

BLAST of Cucsa.358500 vs. NCBI nr
Match: gi|659111415|ref|XP_008455733.1| (PREDICTED: 10 kDa chaperonin-like [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 3.6e-45
Identity = 94/97 (96.91%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKS+KLNSGKVIAVGPGARDREGKIIPISV
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD+VLLPEYGGNEVKLGEKQFYLFRDEDLLGTLH+
Sbjct: 61 KEGDIVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHE 97

[Close]

BLAST of Cucsa.358500 vs. NCBI nr
Match: gi|702279462|ref|XP_010045089.1| (PREDICTED: 10 kDa chaperonin-like [Eucalyptus grandis])

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-39
Identity = 80/97 (82.47%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVLIEKIVPP+KTN+GILLPEK+TKLNSGKV+AVGPGARD++GKIIP+SV
Sbjct: 1  MAKRLIPTLNRVLIEKIVPPSKTNTGILLPEKTTKLNSGKVMAVGPGARDKDGKIIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEG+ VLLPEYGG EVKLGEK+++L+RDED+LGTLHD
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKEYHLYRDEDILGTLHD 97

[Close]

BLAST of Cucsa.358500 vs. NCBI nr
Match: gi|672126798|ref|XP_008786859.1| (PREDICTED: 10 kDa chaperonin-like [Phoenix dactylifera])

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-39
Identity = 78/97 (80.41%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVL+EKIVPP+KTN+GILLPEK+TKLNSGKV+AVGPGARDR+G +IP+SV
Sbjct: 1  MAKRLIPSLNRVLVEKIVPPSKTNAGILLPEKTTKLNSGKVVAVGPGARDRDGNVIPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGDMVLLPEYGG EVKLG+K+++LFRD+D+LGTLH+
Sbjct: 61 KEGDMVLLPEYGGTEVKLGDKEYHLFRDDDILGTLHE 97

[Close]

BLAST of Cucsa.358500 vs. NCBI nr
Match: gi|743785975|ref|XP_010922052.1| (PREDICTED: 10 kDa chaperonin-like isoform X1 [Elaeis guineensis])

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-39
Identity = 77/97 (79.38%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60
          MAKRL+P LNRVL+EKIVPP+KTNSGILLPEK+TKLNSGKV+AVGPGARDR+G ++P+SV
Sbjct: 1  MAKRLIPCLNRVLVEKIVPPSKTNSGILLPEKTTKLNSGKVVAVGPGARDRDGNLVPVSV 60

Query: 61 KEGDMVLLPEYGGNEVKLGEKQFYLFRDEDLLGTLHD 98
          KEGD+VLLPEYGG EVKLG+K+++LFRD+D+LGTLH+
Sbjct: 61 KEGDVVLLPEYGGTEVKLGDKEYHLFRDDDILGTLHE 97

The following BLAST results are available for this feature:

BLAST of Cucsa.358500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CH10_ARATH	2.8e-37	71.13	10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1	[more]
CH10_BRANA	4.7e-37	71.13	10 kDa chaperonin OS=Brassica napus PE=3 SV=1	[more]
CH10_SCHPO	8.1e-21	50.52	10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
CH10_ORYLA	3.1e-20	48.96	10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1	[more]
CH10_MOUSE	4.0e-20	51.04	10 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspe1 PE=1 SV=2	[more]

BLAST of Cucsa.358500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYT6_CUCSA	1.0e-46	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G426760 PE=3 SV=1	[more]
A0A059D9Z0_EUCGR	7.1e-40	82.47	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03754 PE=3 SV=1	[more]
D7T1A7_VITVI	6.0e-39	77.32	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g02550 PE=3 SV=...	[more]
M0TSH4_MUSAM	1.8e-38	79.38	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
B9GG69_POPTR	3.9e-38	74.23	10 kDa chaperonin family protein OS=Populus trichocarpa GN=POPTR_0001s28090g PE=...	[more]

BLAST of Cucsa.358500 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23100.1	9.2e-39	75.26	GroES-like family protein	[more]
AT1G14980.1	1.6e-38	71.13	chaperonin 10	[more]
AT5G20720.1	1.4e-10	42.11	chaperonin 20	[more]

BLAST of Cucsa.358500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453157\|ref\|XP_004144325.1\|	1.5e-46	100.00	PREDICTED: 10 kDa chaperonin-like [Cucumis sativus]	[more]
gi\|659111415\|ref\|XP_008455733.1\|	3.6e-45	96.91	PREDICTED: 10 kDa chaperonin-like [Cucumis melo]	[more]
gi\|702279462\|ref\|XP_010045089.1\|	1.0e-39	82.47	PREDICTED: 10 kDa chaperonin-like [Eucalyptus grandis]	[more]
gi\|672126798\|ref\|XP_008786859.1\|	1.0e-39	80.41	PREDICTED: 10 kDa chaperonin-like [Phoenix dactylifera]	[more]
gi\|743785975\|ref\|XP_010922052.1\|	1.7e-39	79.38	PREDICTED: 10 kDa chaperonin-like isoform X1 [Elaeis guineensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011032	GroES-like_sf
IPR018369	Chaprnonin_Cpn10_CS
IPR020818	Chaperonin_GroES

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.358500.1	Cucsa.358500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011032	GroES-like	unknown	SSF50129	GroES-like	coord: 3..96 score: 1.12
IPR018369	Chaperonin GroES, conserved site	PROSITE	PS00681	CHAPERONINS_CPN10	coord: 5..29 scor
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 5..20 score: 2.5E-15coord: 26..47 score: 2.5E-15coord: 61..73 score: 2.5E-15coord: 82..95 score: 2.5
IPR020818	GroES chaperonin family	GENE3D	G3DSA:2.30.33.40		coord: 4..95 score: 9.3
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..97 score: 1.6
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 6..94 score: 4.8
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 4..95 score: 1.9
None	No IPR available	PANTHER	PTHR10772:SF8	10 KDA CHAPERONIN	coord: 1..97 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.358500	Cla012094	Watermelon (97103) v1	cgywmB645
Cucsa.358500	Csa4G426760	Cucumber (Chinese Long) v2	cgycuB502
Cucsa.358500	MELO3C019112	Melon (DHL92) v3.5.1	cgymeB578
Cucsa.358500	ClCG04G005740	Watermelon (Charleston Gray)	cgywcgB609
Cucsa.358500	CSPI04G18990	Wild cucumber (PI 183967)	cgycpiB530
Cucsa.358500	CmaCh07G010950	Cucurbita maxima (Rimu)	cgycmaB0974
Cucsa.358500	CmoCh07G011440	Cucurbita moschata (Rifu)	cgycmoB0977
Cucsa.358500	Cp4.1LG19g02510	Cucurbita pepo (Zucchini)	cgycpeB0934
Cucsa.358500	MELO3C019112.2	Melon (DHL92) v3.6.1	cgymedB579
Cucsa.358500	CsaV3_4G029380	Cucumber (Chinese Long) v3	cgycucB544
Cucsa.358500	Cla97C04G072300	Watermelon (97103) v2	cgywmbB613
Cucsa.358500	Bhi03G002060	Wax gourd	cgywgoB715
Cucsa.358500	Carg13312	Silver-seed gourd	carcgyB0659

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.358500	Cucurbita maxima (Rimu)	cgycmaB0973
Cucsa.358500	Bottle gourd (USVL1VR-Ls)	cgylsiB576