Cla012094 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla012094
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	chaperonin (AHRD V1 ***- O24186_ORYSA); contains Interpro domain(s) IPR001476 Chaperonin Cpn10
Location	Chr4 : 16518801 .. 16520223 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGCGTTTGGTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTGCCTCCTGCCAAAACCAATTCCGGCATTCTGCTTCCTGAGAAGTCCAGTAAGGTGAATCTTCCTTTCCTCTCTCCCCCATTTCGATTCCCAAAATGTTAATTCGGTTGTTTGTGTATGGGAATTCGTGGGAGAATCGGCTTTCTCTTGCAATTTGCTTTTGTTTTCGTTGTTTCTTTACCGAGATTCTGGAAATTTGCGGCACTTAATTCTCTCGGACGTCTAGAGTCATTTTCGTTGATGGGTATTCTTATGGAGTCATTTCCGTTTATGGGGGTTTTTTTTTTTCCCTCTTTAGCCTTTTCTTATTTAATAGTTATTTGGTTTATGGTTTGTTGTGAAGTCGGCTTCTAGTTGGGTCTGTGAGCTCATTTAGTGGTTATTTAATTAATTTCAATATTAGCCTATTCAAAGAAGACTTGTAATATAAGTTGAAAGTGTGAATGTTTTCATTTCCTCCTGATTTCAATGTTAGTGACTGAACGATTTATAACAAAATCTTTTTTCAAAGAGTGCGTTGTTAAATAATTCAAGACCGAATGCTTAACATAGATGTGGATGTAGCTGCTGAACTGTGTGAGTGGGATTGACCATGCAATTTTTTTTTTTTTCATTTTCAGCAGAAATCTAAGTTAGTTTAGAAGTATTTTTCGTGGATGAGCTTTGAATAGCTTTGATTTAGAGTACTTCCTTCCATCAGGATTTTTTAGATTCAGAATGATATGACTGTTTTGTTCATGATAAGTTTAAAGAGTCCATGGATTCTGGCTTGTGTTTTATTTAATCTTAACTCTCTGCATTTGAAGGACTAAATTTGCAATACCTTTCGTCCCAAACTAGTATGTCAGATTCTTATGACTTTCTCATGTTTTTCTTTGGGGTTGGATTTTAAAGATCTTTTGTAATTATTCAATAGGTTAGGTTCTGTAATGGAGAATTGGATCTTTTTTCTCTAGTTGGGCTCCCTTTTGTGGTCTTGATTTTTTTTCTTTTTTCTTTTTTATTATTATTTTTTTTTGTATTATTGTATTCTTTCATTTCTTTTCTCAATGAAAATTGTTATAAAAAAAAGTTGTTGTGACGTTCGGCTTTGTTACACAAAATTTATGGATCGTTTATCGAGTGCCTCTTCCACTGACTTTTGTTTCTCATGTAGCTTAACTCTGGAAAAGTTATCTCTGTTGGTCCTGGGGCTCGTGATAGAGAGGGAAAGATTATTCCTGTCACTGTAAAAGAAGGTGACACCGTCCTCCTACCAGAATATGGAGGCACTGAAGTCAAGCTTGGAGAAAAACAGTATGTATACTTGTTCTCTTACTTTTGTTATTTATTTAAGTTTTGGTCTGTTATTTGCTCAAGAATTTGGTTTTAA

mRNA sequence

ATGGCGAAGCGTTTGGTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTGCCTCCTGCCAAAACCAATTCCGGCATTCTGCTTCCTGAGAAGTCCAGTAAGCTTAACTCTGGAAAAGTTATCTCTGTTGGTCCTGGGGCTCGTGATAGAGAGGGAAAGATTATTCCTGTCACTGTAAAAGAAGGTGACACCGTCCTCCTACCAGAATATGGAGGCACTGAAGTCAAGCTTGGAGAAAAACAGTATGTATACTTGTTCTCTTACTTTTGTTATTTATTTAAGTTTTGGTCTGTTATTTGCTCAAGAATTTGGTTTTAA

Coding sequence (CDS)

ATGGCGAAGCGTTTGGTTCCATTGCTGAATCGCGTTCTGATCGAGAAGATCGTGCCTCCTGCCAAAACCAATTCCGGCATTCTGCTTCCTGAGAAGTCCAGTAAGCTTAACTCTGGAAAAGTTATCTCTGTTGGTCCTGGGGCTCGTGATAGAGAGGGAAAGATTATTCCTGTCACTGTAAAAGAAGGTGACACCGTCCTCCTACCAGAATATGGAGGCACTGAAGTCAAGCTTGGAGAAAAACAGTATGTATACTTGTTCTCTTACTTTTGTTATTTATTTAAGTTTTGGTCTGTTATTTGCTCAAGAATTTGGTTTTAA

Protein sequence

MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTVKEGDTVLLPEYGGTEVKLGEKQYVYLFSYFCYLFKFWSVICSRIWF

Homology

[Close]

BLAST of Cla012094 vs. Swiss-Prot
Match: CH10_ARATH (10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 6.5e-32
Identity = 62/83 (74.70%), Postives = 75/83 (90.36%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          M KRL+P  NR+L+++++ PAKT SGILLPEKSSKLNSGKVI+VGPG+RD++GK+IPV+V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQY 84
          KEGDTVLLPEYGGT+VKLGE +Y
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEY 83

[Close]

BLAST of Cla012094 vs. Swiss-Prot
Match: CH10_BRANA (10 kDa chaperonin OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-31
Identity = 62/83 (74.70%), Postives = 76/83 (91.57%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          M KRL+P  NR+L++ ++ PAKT SGILLPEK+SKLNSGKVI+VGPG+RD++GK+IPV+V
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQY 84
          KEGDTVLLPEYGGT+VKLGEK+Y
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEY 83

[Close]

BLAST of Cla012094 vs. Swiss-Prot
Match: CH10_SCHPO (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hsp10 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.0e-18
Identity = 45/83 (54.22%), Postives = 60/83 (72.29%), Query Frame = 1


Query: 2  AKRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGARDREGKIIPVTV 61
          AK +VPLL+R+L+++I    KT SGI LPEKS  KL+ G+VISVG G  ++EGK+   +V
Sbjct: 8  AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSV 67

Query: 62 KEGDTVLLPEYGGTEVKLGEKQY 84
            GD VLLP YGG+ +K+GE++Y
Sbjct: 68 AVGDRVLLPAYGGSNIKVGEEEY 90

[Close]

BLAST of Cla012094 vs. Swiss-Prot
Match: CH10_YEAST (10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSP10 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.9e-16
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 1


Query: 2  AKRLVPLLNRVLIEKIVPPAKTNSGILLPEKS-SKLNSGKVISVGPGARDREGKIIPVTV 61
          AK +VPL++RVL+++I   AKT SG+ LPEK+  KLN  +V++VGPG  D  G  +   V
Sbjct: 8  AKSIVPLMDRVLVQRIKAQAKTASGLYLPEKNVEKLNQAEVVAVGPGFTDANGNKVVPQV 67

Query: 62 KEGDTVLLPEYGGTEVKLGEKQYVYLF 88
          K GD VL+P++GG+ +KLG    V LF
Sbjct: 68 KVGDQVLIPQFGGSTIKLGNDDEVILF 94

[Close]

BLAST of Cla012094 vs. Swiss-Prot
Match: CH10_ORYLA (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 5.5e-15
Identity = 39/86 (45.35%), Postives = 62/86 (72.09%), Query Frame = 1


Query: 3  KRLVPLLNRVLIEKIVPPAKTNSGILLPEKSS-KLNSGKVISVGPGARDREGKIIPVTVK 62
          ++ +PL +RVL+E+++    T  GI+LPEKS  K+    V++VGPG+ +++G++ P++VK
Sbjct: 4  RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVK 63

Query: 63 EGDTVLLPEYGGTEVKLGEKQYVYLF 88
           G+ VLLP+YGGT+V L +K Y +LF
Sbjct: 64 VGEKVLLPQYGGTKVVLEDKDY-FLF 88

[Close]

BLAST of Cla012094 vs. TrEMBL
Match: A0A0A0KYT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G426760 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-34
Identity = 77/87 (88.51%), Postives = 83/87 (95.40%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKS+KLNSGKVI+VGPGARDREGKIIP++V
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQYVYLF 88
          KEGD VLLPEYGG EVKLGEKQ+ YLF
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQF-YLF 86

[Close]

BLAST of Cla012094 vs. TrEMBL
Match: M0TSH4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-33
Identity = 69/83 (83.13%), Postives = 82/83 (98.80%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+PL NRVL+EKIVPP+KT++GILLPEK++KLNSGKV++VGPGARDR+GK+IPV+V
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTSAGILLPEKTTKLNSGKVVAVGPGARDRDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQY 84
          KEGDTVLLPEYGGTEVKLGEK+Y
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKEY 83

[Close]

BLAST of Cla012094 vs. TrEMBL
Match: A0A059D9Z0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03754 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.3e-33
Identity = 70/83 (84.34%), Postives = 82/83 (98.80%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+P LNRVLIEKIVPP+KTN+GILLPEK++KLNSGKV++VGPGARD++GKIIPV+V
Sbjct: 1  MAKRLIPTLNRVLIEKIVPPSKTNTGILLPEKTTKLNSGKVMAVGPGARDKDGKIIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQY 84
          KEG+TVLLPEYGGTEVKLGEK+Y
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKEY 83

[Close]

BLAST of Cla012094 vs. TrEMBL
Match: B9GG69_POPTR (10 kDa chaperonin family protein OS=Populus trichocarpa GN=POPTR_0001s28090g PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.3e-33
Identity = 67/83 (80.72%), Postives = 81/83 (97.59%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+P  NR+L+EKI+PP+KTNSGILLPEK+SKLNSGKV++VGPGARD++GK+IPVT+
Sbjct: 1  MAKRLIPTFNRILVEKIIPPSKTNSGILLPEKTSKLNSGKVVAVGPGARDKDGKLIPVTL 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQY 84
          KEG+TVLLPEYGGTEVKLGEK+Y
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKEY 83

[Close]

BLAST of Cla012094 vs. TrEMBL
Match: A0A103XSU5_CYNCS (Chaperonin Cpn10 OS=Cynara cardunculus var. scolymus GN=Ccrd_001673 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-32
Identity = 72/90 (80.00%), Postives = 80/90 (88.89%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+P LNRVL+EKIVPP+KT +GILLPEKSSKLNSGKV++VGPG RD  G  IPV V
Sbjct: 1  MAKRLIPCLNRVLVEKIVPPSKTTAGILLPEKSSKLNSGKVVAVGPGTRDNSGNTIPVAV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQYVY-LFSY 90
          KEGDTVLLPEYGG EVKLGEK+YV+ LFSY
Sbjct: 61 KEGDTVLLPEYGGMEVKLGEKEYVFPLFSY 90

[Close]

BLAST of Cla012094 vs. NCBI nr
Match: gi|659111415|ref|XP_008455733.1| (PREDICTED: 10 kDa chaperonin-like [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-34
Identity = 78/87 (89.66%), Postives = 83/87 (95.40%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKSSKLNSGKVI+VGPGARDREGKIIP++V
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSSKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQYVYLF 88
          KEGD VLLPEYGG EVKLGEKQ+ YLF
Sbjct: 61 KEGDIVLLPEYGGNEVKLGEKQF-YLF 86

[Close]

BLAST of Cla012094 vs. NCBI nr
Match: gi|449453157|ref|XP_004144325.1| (PREDICTED: 10 kDa chaperonin-like [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 2.4e-34
Identity = 77/87 (88.51%), Postives = 83/87 (95.40%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+PLLNRVLIEKIVPP KTNSGILLPEKS+KLNSGKVI+VGPGARDREGKIIP++V
Sbjct: 1  MAKRLLPLLNRVLIEKIVPPTKTNSGILLPEKSTKLNSGKVIAVGPGARDREGKIIPISV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQYVYLF 88
          KEGD VLLPEYGG EVKLGEKQ+ YLF
Sbjct: 61 KEGDMVLLPEYGGNEVKLGEKQF-YLF 86

[Close]

BLAST of Cla012094 vs. NCBI nr
Match: gi|695052315|ref|XP_009414211.1| (PREDICTED: 10 kDa chaperonin-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 149.1 bits (375), Expect = 4.5e-33
Identity = 69/83 (83.13%), Postives = 82/83 (98.80%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+PL NRVL+EKIVPP+KT++GILLPEK++KLNSGKV++VGPGARDR+GK+IPV+V
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTSAGILLPEKTTKLNSGKVVAVGPGARDRDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQY 84
          KEGDTVLLPEYGGTEVKLGEK+Y
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKEY 83

[Close]

BLAST of Cla012094 vs. NCBI nr
Match: gi|702279462|ref|XP_010045089.1| (PREDICTED: 10 kDa chaperonin-like [Eucalyptus grandis])

HSP 1 Score: 148.3 bits (373), Expect = 7.7e-33
Identity = 70/83 (84.34%), Postives = 82/83 (98.80%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+P LNRVLIEKIVPP+KTN+GILLPEK++KLNSGKV++VGPGARD++GKIIPV+V
Sbjct: 1  MAKRLIPTLNRVLIEKIVPPSKTNTGILLPEKTTKLNSGKVMAVGPGARDKDGKIIPVSV 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQY 84
          KEG+TVLLPEYGGTEVKLGEK+Y
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKEY 83

[Close]

BLAST of Cla012094 vs. NCBI nr
Match: gi|224059690|ref|XP_002299972.1| (10 kDa chaperonin family protein [Populus trichocarpa])

HSP 1 Score: 148.3 bits (373), Expect = 7.7e-33
Identity = 67/83 (80.72%), Postives = 81/83 (97.59%), Query Frame = 1


Query: 1  MAKRLVPLLNRVLIEKIVPPAKTNSGILLPEKSSKLNSGKVISVGPGARDREGKIIPVTV 60
          MAKRL+P  NR+L+EKI+PP+KTNSGILLPEK+SKLNSGKV++VGPGARD++GK+IPVT+
Sbjct: 1  MAKRLIPTFNRILVEKIIPPSKTNSGILLPEKTSKLNSGKVVAVGPGARDKDGKLIPVTL 60

Query: 61 KEGDTVLLPEYGGTEVKLGEKQY 84
          KEG+TVLLPEYGGTEVKLGEK+Y
Sbjct: 61 KEGETVLLPEYGGTEVKLGEKEY 83

The following BLAST results are available for this feature:

BLAST of Cla012094 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CH10_ARATH	6.5e-32	74.70	10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1	[more]
CH10_BRANA	1.1e-31	74.70	10 kDa chaperonin OS=Brassica napus PE=3 SV=1	[more]
CH10_SCHPO	7.0e-18	54.22	10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]
CH10_YEAST	2.9e-16	49.43	10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
CH10_ORYLA	5.5e-15	45.35	10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1	[more]

BLAST of Cla012094 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYT6_CUCSA	1.7e-34	88.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G426760 PE=3 SV=1	[more]
M0TSH4_MUSAM	3.1e-33	83.13	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1	[more]
A0A059D9Z0_EUCGR	5.3e-33	84.34	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03754 PE=3 SV=1	[more]
B9GG69_POPTR	5.3e-33	80.72	10 kDa chaperonin family protein OS=Populus trichocarpa GN=POPTR_0001s28090g PE=...	[more]
A0A103XSU5_CYNCS	1.6e-32	80.00	Chaperonin Cpn10 OS=Cynara cardunculus var. scolymus GN=Ccrd_001673 PE=3 SV=1	[more]

BLAST of Cla012094 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111415\|ref\|XP_008455733.1\|	1.1e-34	89.66	PREDICTED: 10 kDa chaperonin-like [Cucumis melo]	[more]
gi\|449453157\|ref\|XP_004144325.1\|	2.4e-34	88.51	PREDICTED: 10 kDa chaperonin-like [Cucumis sativus]	[more]
gi\|695052315\|ref\|XP_009414211.1\|	4.5e-33	83.13	PREDICTED: 10 kDa chaperonin-like [Musa acuminata subsp. malaccensis]	[more]
gi\|702279462\|ref\|XP_010045089.1\|	7.7e-33	84.34	PREDICTED: 10 kDa chaperonin-like [Eucalyptus grandis]	[more]
gi\|224059690\|ref\|XP_002299972.1\|	7.7e-33	80.72	10 kDa chaperonin family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011032	GroES-like_sf
IPR018369	Chaprnonin_Cpn10_CS
IPR020818	Chaperonin_GroES

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0051085	chaperone mediated protein folding requiring cofactor
biological_process	GO:0006986	response to unfolded protein
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051082	unfolded protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU10279	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU12461	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU39787	watermelon EST collection version 2.0	transcribed_cluster
WMU48001	watermelon EST collection version 2.0	transcribed_cluster
WMU58044	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla012094	Cla012094.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU39787	WMU39787	transcribed_cluster
WMU12461	WMU12461	transcribed_cluster
WMU10279	WMU10279	transcribed_cluster
WMU58044	WMU58044	transcribed_cluster
WMU48001	WMU48001	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011032	GroES-like	unknown	SSF50129	GroES-like	coord: 4..85 score: 4.24
IPR018369	Chaperonin GroES, conserved site	PROSITE	PS00681	CHAPERONINS_CPN10	coord: 5..29 scor
IPR020818	GroES chaperonin family	PRINTS	PR00297	CHAPERONIN10	coord: 26..47 score: 9.8E-11coord: 61..73 score: 9.8E-11coord: 5..20 score: 9.8
IPR020818	GroES chaperonin family	GENE3D	G3DSA:2.30.33.40		coord: 3..85 score: 4.5
IPR020818	GroES chaperonin family	PANTHER	PTHR10772	10 KDA HEAT SHOCK PROTEIN	coord: 1..83 score: 1.3
IPR020818	GroES chaperonin family	PFAM	PF00166	Cpn10	coord: 5..86 score: 3.5
IPR020818	GroES chaperonin family	SMART	SM00883	Cpn10_2	coord: 4..85 score: 1.6
None	No IPR available	PANTHER	PTHR10772:SF8	10 KDA CHAPERONIN	coord: 1..83 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla012094	Cla97C04G072300	Watermelon (97103) v2	wmwmbB291
Cla012094	Csa4G426760	Cucumber (Chinese Long) v2	cuwmB340
Cla012094	MELO3C019112	Melon (DHL92) v3.5.1	mewmB577
Cla012094	ClCG04G005740	Watermelon (Charleston Gray)	wcgwmB255
Cla012094	CSPI04G18990	Wild cucumber (PI 183967)	cpiwmB347
Cla012094	Cucsa.358500	Cucumber (Gy14) v1	cgywmB645
Cla012094	CmaCh07G010950	Cucurbita maxima (Rimu)	cmawmB829
Cla012094	CmoCh07G011440	Cucurbita moschata (Rifu)	cmowmB818
Cla012094	Cp4.1LG19g02510	Cucurbita pepo (Zucchini)	cpewmB492
Cla012094	CsGy4G017990	Cucumber (Gy14) v2	cgybwmB317
Cla012094	MELO3C019112.2	Melon (DHL92) v3.6.1	medwmB566
Cla012094	Carg13312	Silver-seed gourd	carwmB0577
Cla012094	CsaV3_4G029380	Cucumber (Chinese Long) v3	cucwmB358
Cla012094	Bhi03G002060	Wax gourd	wgowmB440

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla012094	Cucurbita maxima (Rimu)	cmawmB634
Cla012094	Bottle gourd (USVL1VR-Ls)	lsiwmB154