Bhi05G001474 (gene) Wax gourd

Overview
NameBhi05G001474
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr5 : 55548933 .. 55549922 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAATTTTAATTTGAATATATGCGTATATAATTTTATTTTAGATTTAAAGAAATTTTCAAATGTTAATAAAAACTTAATATATATATATGTGTGTGTTTCTATTATTTATCTTATGAATTATTTTTCACGACAAAACGTGTATAAAAAAAAGATCAATACATGATTAGTTATATTGCAAAAGTGTTTATTTCTAAGAGAGTGCATATTCAATATACTTACCTACTTCAATGCAAAATTTAGATGTGTTTCAATGAAGGAGCTAAAGACAACTCATTACTAGTGTTATTTGTTGTAGCTACCCAAACTAAGTTTTGTTATGTAGTTGTGGCTAATTCTTGTTATATAAATGGAAGGCTTGTGCCTATAAAAGGATATGTGTGCTTTTAGATGATCATCAAATAAATCCTATTTCTTGCAAAACTTCCTTCTCTTATTAGAAAAAACTTCATTGTTGTGTTATTTATAAGCTCTCGGACGAAGTTCGCTCTCTCTTGCATAAGGTGTCGAACCCCTAACTAGTAGGCACACTAAACAAGAGTTTGAATCGATTCGTTTGGTTTCATATATGAAAAGAGCAAATTGAAAGAAATACTTTTAGAAATTAGAAACCGATCGGTTTGGTTTCGTTTGATTCTTCTTCTTTTTCATCATATGGCTTGTTTTCTTGTCAAGTGTAGGGTATCACATCAAGTGCCAAAAATTCGTAAAGATGGTAGTAATAGAAAGGCAAGGAAAAGCCAAAGAGATGGTATTGTTGTTGGCGAGGTGCCTACAACGATGAAGAACAAGAAATGGCATCGACAAAGACAGGTAGGCGGTAAAGAGCGAAAAATGGTGTCGTCGTCAAGATTGCGACGATCACAAAGAGGGAATGAGTTGGGCGGCTGGCTTGCAGCCTGGTTGGAAGAGGCCGAAGGAGAAAGAGAGAGAGATGAAATTAAAGAGTTGGAGAAGGCCTCCAAAGGCTAAAGAAAAATTGAAAAAGCC

mRNA sequence

ATAAAATTTTAATTTGAATATATGCGTATATAATTTTATTTTAGATTTAAAGAAATTTTCAAATGTTAATAAAAACTTAATATATATATATGTGTGTGTTTCTATTATTTATCTTATGAATTATTTTTCACGACAAAACGTGTATAAAAAAAAGATCAATACATGATTAGTTATATTGCAAAAGTGTTTATTTCTAAGAGAGTGCATATTCAATATACTTACCTACTTCAATGCAAAATTTAGATGTGTTTCAATGAAGGAGCTAAAGACAACTCATTACTAGTGTTATTTGTTGTAGCTACCCAAACTAAGTTTTGTTATGTAGTTGTGGCTAATTCTTGTTATATAAATGGAAGGCTTGTGCCTATAAAAGGATATGTGTGCTTTTAGATGATCATCAAATAAATCCTATTTCTTGCAAAACTTCCTTCTCTTATTAGAAAAAACTTCATTGTTGTGTTATTTATAAGCTCTCGGACGAAGTTCGCTCTCTCTTGCATAAGGTGTCGAACCCCTAACTAGTAGGCACACTAAACAAGAGTTTGAATCGATTCGTTTGGTTTCATATATGAAAAGAGCAAATTGAAAGAAATACTTTTAGAAATTAGAAACCGATCGGTTTGGTTTCGTTTGATTCTTCTTCTTTTTCATCATATGGCTTGTTTTCTTGTCAAGTGTAGGGTATCACATCAAGTGCCAAAAATTCGTAAAGATGGTAGTAATAGAAAGGCAAGGAAAAGCCAAAGAGATGGTATTGTTGTTGGCGAGGTGCCTACAACGATGAAGAACAAGAAATGGCATCGACAAAGACAGGTAGGCGGTAAAGAGCGAAAAATGGTGTCGTCGTCAAGATTGCGACGATCACAAAGAGGGAATGAGTTGGGCGGCTGGCTTGCAGCCTGGTTGGAAGAGGCCGAAGGAGAAAGAGAGAGAGATGAAATTAAAGAGTTGGAGAAGGCCTCCAAAGGCTAAAGAAAAATTGAAAAAGCC

Coding sequence (CDS)

ATGGCTTGTTTTCTTGTCAAGTGTAGGGTATCACATCAAGTGCCAAAAATTCGTAAAGATGGTAGTAATAGAAAGGCAAGGAAAAGCCAAAGAGATGGTATTGTTGTTGGCGAGGTGCCTACAACGATGAAGAACAAGAAATGGCATCGACAAAGACAGGTAGGCGGTAAAGAGCGAAAAATGGTGTCGTCGTCAAGATTGCGACGATCACAAAGAGGGAATGAGTTGGGCGGCTGGCTTGCAGCCTGGTTGGAAGAGGCCGAAGGAGAAAGAGAGAGAGATGAAATTAAAGAGTTGGAGAAGGCCTCCAAAGGCTAA

Protein sequence

MACFLVKCRVSHQVPKIRKDGSNRKARKSQRDGIVVGEVPTTMKNKKWHRQRQVGGKERKMVSSSRLRRSQRGNELGGWLAAWLEEAEGERERDEIKELEKASKG
Homology
[Close]
BLAST of Bhi05G001474 vs. TrEMBL
Match: tr|A0A0A0K1A5|A0A0A0K1A5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G011880 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-22
Identity = 70/108 (64.81%), Postives = 82/108 (75.93%), Query Frame = 0 

Query: 1   MACFLVKCRVSHQVPKIRKDGSNRKARKSQR-DGIVVGEVPTTMK-NKKWHRQRQVGGKE 60
           M CFL KC   +QV +IR+DG NRK RK +R D IV+GE P TMK ++K H  R+V  KE
Sbjct: 1   MNCFLAKCGTLNQVLRIREDGHNRKERKIERDDDIVIGEAPKTMKISRKGH--RRVRSKE 60

Query: 61  RKMV-SSSRLRRSQ-RGNELGGWLAAWLEEAEGERERDEIKELEKASK 105
           RKM+ SSSRL+RSQ    ELGGWLAAWLEEAEGERE+DE+KELEK  K
Sbjct: 61  RKMMPSSSRLQRSQIERVELGGWLAAWLEEAEGEREKDEVKELEKEIK 106

[Close]
BLAST of Bhi05G001474 vs. NCBI nr
Match: KGN43248.1 (hypothetical protein Csa_7G011880 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 1.2e-21
Identity = 70/108 (64.81%), Postives = 82/108 (75.93%), Query Frame = 0 

Query: 1   MACFLVKCRVSHQVPKIRKDGSNRKARKSQR-DGIVVGEVPTTMK-NKKWHRQRQVGGKE 60
           M CFL KC   +QV +IR+DG NRK RK +R D IV+GE P TMK ++K H  R+V  KE
Sbjct: 1   MNCFLAKCGTLNQVLRIREDGHNRKERKIERDDDIVIGEAPKTMKISRKGH--RRVRSKE 60

Query: 61  RKMV-SSSRLRRSQ-RGNELGGWLAAWLEEAEGERERDEIKELEKASK 105
           RKM+ SSSRL+RSQ    ELGGWLAAWLEEAEGERE+DE+KELEK  K
Sbjct: 61  RKMMPSSSRLQRSQIERVELGGWLAAWLEEAEGEREKDEVKELEKEIK 106

The following BLAST results are available for this feature:
BLAST of Bhi05G001474 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi05G001474 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi05G001474 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K1A5|A0A0A0K1A5_CUCSA7.8e-2264.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G011880 PE=4 SV=1[more]
BLAST of Bhi05G001474 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43248.11.2e-2164.81hypothetical protein Csa_7G011880 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M001474Bhi05M001474mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..70

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi05G001474Csa7G011880Cucumber (Chinese Long) v2cuwgoB670
Bhi05G001474ClCG02G004140Watermelon (Charleston Gray)wcgwgoB266
Bhi05G001474CSPI07G00940Wild cucumber (PI 183967)cpiwgoB681
Bhi05G001474CmaCh11G013830Cucurbita maxima (Rimu)cmawgoB0115
Bhi05G001474CmoCh11G017370Cucurbita moschata (Rifu)cmowgoB0115
Bhi05G001474Lsi11G011980Bottle gourd (USVL1VR-Ls)lsiwgoB118
Bhi05G001474Cp4.1LG04g05060Cucurbita pepo (Zucchini)cpewgoB0851
Bhi05G001474Cp4.1LG15g05900Cucurbita pepo (Zucchini)cpewgoB0326
Bhi05G001474CsaV3_7G000970Cucumber (Chinese Long) v3cucwgoB695
Bhi05G001474Cla015829Watermelon (97103) v1wgowmB272
Bhi05G001474Cla97C02G030940Watermelon (97103) v2wgowmbB241
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi05G001474Bottle gourd (USVL1VR-Ls)lsiwgoB065
Bhi05G001474Melon (DHL92) v3.6.1medwgoB109
Bhi05G001474Melon (DHL92) v3.6.1medwgoB213
Bhi05G001474Melon (DHL92) v3.5.1mewgoB109
Bhi05G001474Melon (DHL92) v3.5.1mewgoB213
Bhi05G001474Watermelon (Charleston Gray)wcgwgoB279
Bhi05G001474Watermelon (97103) v2wgowmbB254
Bhi05G001474Watermelon (97103) v1wgowmB283
Bhi05G001474Silver-seed gourdcarwgoB0397
Bhi05G001474Silver-seed gourdcarwgoB0430
Bhi05G001474Silver-seed gourdcarwgoB0940
Bhi05G001474Silver-seed gourdcarwgoB1195
Bhi05G001474Wax gourdwgowgoB068
Bhi05G001474Cucumber (Gy14) v1cgywgoB462
Bhi05G001474Cucumber (Gy14) v1cgywgoB744
Bhi05G001474Cucumber (Gy14) v2cgybwgoB146
Bhi05G001474Cucumber (Gy14) v2cgybwgoB641
Bhi05G001474Cucurbita maxima (Rimu)cmawgoB0652
Bhi05G001474Cucurbita maxima (Rimu)cmawgoB0677
Bhi05G001474Cucurbita maxima (Rimu)cmawgoB0742
Bhi05G001474Cucurbita moschata (Rifu)cmowgoB0653
Bhi05G001474Cucurbita moschata (Rifu)cmowgoB0673
Bhi05G001474Cucurbita moschata (Rifu)cmowgoB0734
Bhi05G001474Cucurbita pepo (Zucchini)cpewgoB0350
Bhi05G001474Wild cucumber (PI 183967)cpiwgoB151
Bhi05G001474Cucumber (Chinese Long) v3cucwgoB159
Bhi05G001474Cucumber (Chinese Long) v2cuwgoB152