Carg00704 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00704
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	EPIDERMAL PATTERNING FACTOR-like protein 1
Location	Cucurbita_argyrosperma_scaffold_014 : 1052940 .. 1053795 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAAGGGGAGAGTGGGTGAGTAAATGCGGTCCCTTTGCAGCCAGCCAGACTAGTGATTGACAGCCTAAAGCTGTTACAAAGCTGTACAATGGAAAAATAGGGCGTCCTTTGTATGTGATGTGAGTACTCCATATTTGTTTTTCCCTCACTGTATTGTTCCTTTCACCGTTCTGCTGCAATCTGCCCTCTTACTCAGAACTTCTCTCTCAGTTACTTGTGGTTGTGGTGCGATTGGTGGAAGTGGAGTAAAGTACCAGAAAAGTGTGGCAACTGGGTCTTTATTACGTATGATTTTTACTCCTTTGCACCGTTGGATCCATGAGTTCTGGGTATCCATGACTGGATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTCTTGTGCTTGTACATCTTCTTCCTCTTCTCTCGGCTTCTCCTCCTCCCATAGTATGCCTTCTCTTTCTCTTCCATGGCTTTCTTTCCATTTTTTTAATGTTTCTTTTAATGACAAGTTTTTATGCTTGCTGGTTTGATCAGGGTATATCTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCATGCATGGCGGTGCAGGTGCCTAGTATGCCTCGCCGTGCCGGCCGGTTGGATTCGCCCTCGGCTTTGCCAATGAGATTTTTTGACTCGTCTCCTCAAGGGAACAGATACTCATTTTACAAGCCATTGAGTTGGAAGTGCCGCTGTGGGAACCGCTTCTTCAATCCTTAGACCAAATTGCATGTCCAGTACAGAGGCTTGGTCTTCCTTTCATTCCCCCTGGTTCTGTTAATGGCATTGAATTGTTTCTT

mRNA sequence

GCAAAGGGGAGAGTGGGTGAGTAAATGCGGTCCCTTTGCAGCCAGCCAGACTAGTGATTGACAGCCTAAAGCTGTTACAAAGCTGTACAATGGAAAAATAGGGCGTCCTTTGTATGTGATTTACTTGTGGTTGTGGTGCGATTGGTGGAAGTGGAGTAAAGTACCAGAAAAGTGTGGCAACTGGGTCTTTATTACGTATGATTTTTACTCCTTTGCACCGTTGGATCCATGAGTTCTGGGTATCCATGACTGGATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTCTTGTGCTTGTACATCTTCTTCCTCTTCTCTCGGCTTCTCCTCCTCCCATAGGTATATCTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCATGCATGGCGGTGCAGGTGCCTAGTATGCCTCGCCGTGCCGGCCGGTTGGATTCGCCCTCGGCTTTGCCAATGAGATTTTTTGACTCGTCTCCTCAAGGGAACAGATACTCATTTTACAAGCCATTGAGTTGGAAGTGCCGCTGTGGGAACCGCTTCTTCAATCCTTAGACCAAATTGCATGTCCAGTACAGAGGCTTGGTCTTCCTTTCATTCCCCCTGGTTCTGTTAATGGCATTGAATTGTTTCTT

Coding sequence (CDS)

ATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTCTTGTGCTTGTACATCTTCTTCCTCTTCTCTCGGCTTCTCCTCCTCCCATAGGTATATCTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCATGCATGGCGGTGCAGGTGCCTAGTATGCCTCGCCGTGCCGGCCGGTTGGATTCGCCCTCGGCTTTGCCAATGAGATTTTTTGACTCGTCTCCTCAAGGGAACAGATACTCATTTTACAAGCCATTGAGTTGGAAGTGCCGCTGTGGGAACCGCTTCTTCAATCCTTAG

Protein sequence

MTTMNLATVWATSLLLVLVHLLPLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP

Homology

[Close]

BLAST of Carg00704 vs. NCBI nr
Match: KGN48738.1 (hypothetical protein Csa_6G499820 [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 9.9e-43
Identity = 88/113 (77.88%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   MTTMNLATVWATSLLLVLVHLLPLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNLATVWATSL                  G+ FEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 5   MTTMNLATVWATSLXXXXXXXXXXXXXXXXXRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDSPSALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of Carg00704 vs. NCBI nr
Match: XP_008440584.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 3.8e-42
Identity = 88/113 (77.88%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 1   MTTMNLATVWATSLLLVLVHLLPLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNLATVWATSL                  GI FEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 22  MTTMNLATVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDS SALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]

BLAST of Carg00704 vs. NCBI nr
Match: XP_010646934.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera])

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27
Identity = 58/84 (69.05%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 33  GISFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRRAG-RLDSPSALPMRFFDSSPQ- 92
           G+ FE+KTRLGSTPPSCHNKCNECHPCMAVQVP++P  +G RL   + +PM FF+SSP  
Sbjct: 40  GLLFEEKTRLGSTPPSCHNKCNECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPST 99

Query: 93  -GNRYSFYKPLSWKCRCGNRFFNP 114
             NRYS YKPL WKC CG+ FFNP
Sbjct: 100 AANRYSNYKPLGWKCHCGDHFFNP 123

[Close]

BLAST of Carg00704 vs. NCBI nr
Match: XP_010025427.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Eucalyptus grandis] >KCW62084.1 hypothetical protein EUGRSUZ_H04752 [Eucalyptus grandis])

HSP 1 Score: 122.1 bits (305), Expect = 1.2e-24
Identity = 58/88 (65.91%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 30  PPIGISFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRRAGR---LDSPSALPMRFFD 89
           P  G+SFE+KTRLGSTPPSCHNKCN CHPCMAVQVPS+P  AGR       ++ P  F D
Sbjct: 39  PRQGLSFEEKTRLGSTPPSCHNKCNGCHPCMAVQVPSLPAAAGREKMKREEASRPAEFVD 98

Query: 90  SSPQG-NRYSFYKPLSWKCRCGNRFFNP 114
            SP    RYS YKPL WKCRC NR FNP
Sbjct: 99  PSPASPGRYSNYKPLGWKCRCRNRLFNP 126

[Close]

BLAST of Carg00704 vs. NCBI nr
Match: XP_007159674.1 (hypothetical protein PHAVU_002G257600g [Phaseolus vulgaris] >ESW31668.1 hypothetical protein PHAVU_002G257600g [Phaseolus vulgaris])

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 67/113 (59.29%), Postives = 76/113 (67.26%), Query Frame = 0


Query: 12  TSLLLVLV--HLLPLLSAS-PPPIGIS-----FEDKTRLGSTPPSCHNKCNECHPCMAVQ 71
           TSLL+VLV  + L L+SAS  P   IS     FE+K RLGS PPSCHNKCN+CHPCMAVQ
Sbjct: 13  TSLLIVLVLHNFLSLVSASNHPHTSISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 72  VPSMPRRAGR---LDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           VP++P        L   SA+      SSPQGNRYS YKPL WKC CG+ FFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMASFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

[Close]

BLAST of Carg00704 vs. TAIR10
Match: AT5G10310.1 (unknown protein)

HSP 1 Score: 94.4 bits (233), Expect = 4.9e-20
Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 14  LLLVLVHLLPLLSASPPPIG---ISFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRR 73
           +LL+   +   L    PPI       EDK RLGSTPPSCHN+CN CHPCMA+QVP++P R
Sbjct: 17  ILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTR 76

Query: 74  A----------GRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           +          G +  PS+L           ++YS YKP+ WKC C   F+NP
Sbjct: 77  SRFTRVNPFSGGFVRPPSSLTTVL-------DQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Carg00704 vs. TAIR10
Match: AT4G37810.1 (unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08
Identity = 37/125 (29.60%), Postives = 58/125 (46.40%), Query Frame = 0


Query: 5   NLATVWATSLLLVLVHLLPLLSASPPPIGISFED----------KTRLGSTPPSCHN-KC 64
           N+++     L+L   H   + +  P P  + F            +  +GS PP C   +C
Sbjct: 6   NMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRC 65

Query: 65  NECHPCMAVQVPSMPRRAGRLDSP-----SALPMRFFDSSPQGNRYSFYKPLSWKCRCGN 114
             C  C A+QVP+ P+   +L SP     S+          +G+  + YKP+SWKC+CGN
Sbjct: 66  RSCGHCEAIQVPTNPQT--KLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGN 125

[Close]

BLAST of Carg00704 vs. TAIR10
Match: AT2G30370.1 (allergen-related)

HSP 1 Score: 48.5 bits (114), Expect = 3.1e-06
Identity = 24/72 (33.33%), Postives = 33/72 (45.83%), Query Frame = 0


Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLS 101
           LGS+PP C +KC  C PC  V VP           P   P+            + Y P +
Sbjct: 180 LGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVT-----------AEYYPEA 230

Query: 102 WKCRCGNRFFNP 114
           W+C+CGN+ + P
Sbjct: 240 WRCKCGNKLYMP 230

[Close]

BLAST of Carg00704 vs. TAIR10
Match: AT1G80133.1 (unknown protein)

HSP 1 Score: 42.0 bits (97), Expect = 2.9e-04
Identity = 25/72 (34.72%), Postives = 30/72 (41.67%), Query Frame = 0


Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLS 101
           +GS PP C  KC  C PC+    P +    G  D          DS P       Y P+ 
Sbjct: 46  MGSEPPVCATKCRNCKPCL----PYLFDIRGAHDDDD-------DSEP-------YYPVK 99

Query: 102 WKCRCGNRFFNP 114
           W CRC +R F P
Sbjct: 106 WICRCRDRVFEP 99

[Close]

BLAST of Carg00704 vs. Swiss-Prot
Match: sp|Q9LFT5|EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 8.9e-19
Identity = 49/113 (43.36%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 14  LLLVLVHLLPLLSASPPPIG---ISFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRR 73
           +LL+   +   L    PPI       EDK RLGSTPPSCHN+CN CHPCMA+QVP++P R
Sbjct: 17  ILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTR 76

Query: 74  A----------GRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           +          G +  PS+L           ++YS YKP+ WKC C   F+NP
Sbjct: 77  SRFTRVNPFSGGFVRPPSSLTTVL-------DQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Carg00704 vs. Swiss-Prot
Match: sp|Q9T068|EPFL2_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-07
Identity = 37/125 (29.60%), Postives = 58/125 (46.40%), Query Frame = 0


Query: 5   NLATVWATSLLLVLVHLLPLLSASPPPIGISFED----------KTRLGSTPPSCHN-KC 64
           N+++     L+L   H   + +  P P  + F            +  +GS PP C   +C
Sbjct: 6   NMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRC 65

Query: 65  NECHPCMAVQVPSMPRRAGRLDSP-----SALPMRFFDSSPQGNRYSFYKPLSWKCRCGN 114
             C  C A+QVP+ P+   +L SP     S+          +G+  + YKP+SWKC+CGN
Sbjct: 66  RSCGHCEAIQVPTNPQT--KLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGN 125

[Close]

BLAST of Carg00704 vs. Swiss-Prot
Match: sp|Q1PEY6|EPFL6_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.6e-05
Identity = 24/72 (33.33%), Postives = 33/72 (45.83%), Query Frame = 0


Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLS 101
           LGS+PP C +KC  C PC  V VP           P   P+            + Y P +
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVT-----------AEYYPEA 156

Query: 102 WKCRCGNRFFNP 114
           W+C+CGN+ + P
Sbjct: 166 WRCKCGNKLYMP 156

[Close]

BLAST of Carg00704 vs. TrEMBL
Match: tr|A0A0A0KGR1|A0A0A0KGR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499820 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.6e-43
Identity = 88/113 (77.88%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 1   MTTMNLATVWATSLLLVLVHLLPLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNLATVWATSL                  G+ FEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 5   MTTMNLATVWATSLXXXXXXXXXXXXXXXXXRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDSPSALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of Carg00704 vs. TrEMBL
Match: tr|A0A1S3B112|A0A1S3B112_CUCME (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103484960 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-42
Identity = 88/113 (77.88%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 1   MTTMNLATVWATSLLLVLVHLLPLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNLATVWATSL                  GI FEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 22  MTTMNLATVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDS SALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]

BLAST of Carg00704 vs. TrEMBL
Match: tr|F6HJL0|F6HJL0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0391g00030 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-27
Identity = 58/84 (69.05%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 33  GISFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRRAG-RLDSPSALPMRFFDSSPQ- 92
           G+ FE+KTRLGSTPPSCHNKCNECHPCMAVQVP++P  +G RL   + +PM FF+SSP  
Sbjct: 40  GLLFEEKTRLGSTPPSCHNKCNECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPST 99

Query: 93  -GNRYSFYKPLSWKCRCGNRFFNP 114
             NRYS YKPL WKC CG+ FFNP
Sbjct: 100 AANRYSNYKPLGWKCHCGDHFFNP 123

[Close]

BLAST of Carg00704 vs. TrEMBL
Match: tr|A0A059B7S9|A0A059B7S9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H04752 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.1e-25
Identity = 58/88 (65.91%), Postives = 63/88 (71.59%), Query Frame = 0


Query: 30  PPIGISFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSMPRRAGR---LDSPSALPMRFFD 89
           P  G+SFE+KTRLGSTPPSCHNKCN CHPCMAVQVPS+P  AGR       ++ P  F D
Sbjct: 39  PRQGLSFEEKTRLGSTPPSCHNKCNGCHPCMAVQVPSLPAAAGREKMKREEASRPAEFVD 98

Query: 90  SSPQG-NRYSFYKPLSWKCRCGNRFFNP 114
            SP    RYS YKPL WKCRC NR FNP
Sbjct: 99  PSPASPGRYSNYKPLGWKCRCRNRLFNP 126

[Close]

BLAST of Carg00704 vs. TrEMBL
Match: tr|V7CQQ4|V7CQQ4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G257600g PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-24
Identity = 67/113 (59.29%), Postives = 76/113 (67.26%), Query Frame = 0


Query: 12  TSLLLVLV--HLLPLLSAS-PPPIGIS-----FEDKTRLGSTPPSCHNKCNECHPCMAVQ 71
           TSLL+VLV  + L L+SAS  P   IS     FE+K RLGS PPSCHNKCN+CHPCMAVQ
Sbjct: 13  TSLLIVLVLHNFLSLVSASNHPHTSISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 72  VPSMPRRAGR---LDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           VP++P        L   SA+      SSPQGNRYS YKPL WKC CG+ FFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMASFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

The following BLAST results are available for this feature:

BLAST of Carg00704 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48738.1	9.9e-43	77.88	hypothetical protein Csa_6G499820 [Cucumis sativus]	[more]
XP_008440584.1	3.8e-42	77.88	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]	[more]
XP_010646934.1	2.6e-27	69.05	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera]	[more]
XP_010025427.1	1.2e-24	65.91	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Eucalyptus grandis] >KCW6...	[more]
XP_007159674.1	2.7e-24	59.29	hypothetical protein PHAVU_002G257600g [Phaseolus vulgaris] >ESW31668.1 hypothet...	[more]

BLAST of Carg00704 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10310.1	4.9e-20	43.36	unknown protein	[more]
AT4G37810.1	1.1e-08	29.60	unknown protein	[more]
AT2G30370.1	3.1e-06	33.33	allergen-related	[more]
AT1G80133.1	2.9e-04	34.72	unknown protein	[more]

BLAST of Carg00704 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LFT5\|EPFL1_ARATH	8.9e-19	43.36	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
sp\|Q9T068\|EPFL2_ARATH	2.1e-07	29.60	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
sp\|Q1PEY6\|EPFL6_ARATH	5.6e-05	33.33	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Carg00704 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KGR1\|A0A0A0KGR1_CUCSA	6.6e-43	77.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499820 PE=4 SV=1	[more]
tr\|A0A1S3B112\|A0A1S3B112_CUCME	2.5e-42	77.88	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Cucumis melo OX=3656 GN=LOC1034849...	[more]
tr\|F6HJL0\|F6HJL0_VITVI	1.7e-27	69.05	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0391g00030 PE=4 SV=...	[more]
tr\|A0A059B7S9\|A0A059B7S9_EUCGR	8.1e-25	65.91	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H04752 PE=4 SV...	[more]
tr\|V7CQQ4\|V7CQQ4_PHAVU	1.8e-24	59.29	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G257600g PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00704-RA	Carg00704-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 41..113 e-value: 2.8E-22 score: 78.4
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 5..113
None	No IPR available	PANTHER	PTHR33109:SF3	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1	coord: 5..113

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00704	Cla014135	Watermelon (97103) v1	carwmB0407
Carg00704	Csa6G499820	Cucumber (Chinese Long) v2	carcuB0441
Carg00704	MELO3C011120	Melon (DHL92) v3.5.1	carmeB0405
Carg00704	MELO3C007746	Melon (DHL92) v3.5.1	carmeB0414
Carg00704	ClCG01G018670	Watermelon (Charleston Gray)	carwcgB0397
Carg00704	CSPI06G30130	Wild cucumber (PI 183967)	carcpiB0446
Carg00704	Cucsa.104290	Cucumber (Gy14) v1	carcgyB0467
Carg00704	CmaCh12G002330	Cucurbita maxima (Rimu)	carcmaB0558
Carg00704	CmaCh03G008110	Cucurbita maxima (Rimu)	carcmaB0567
Carg00704	CmaCh07G005490	Cucurbita maxima (Rimu)	carcmaB0571
Carg00704	CmoCh07G005530	Cucurbita moschata (Rifu)	carcmoB0554
Carg00704	CmoCh03G008570	Cucurbita moschata (Rifu)	carcmoB0551
Carg00704	Lsi01G007810	Bottle gourd (USVL1VR-Ls)	carlsiB364
Carg00704	CsGy6G029600	Cucumber (Gy14) v2	carcgybB0418
Carg00704	MELO3C011120.2	Melon (DHL92) v3.6.1	carmedB0409
Carg00704	MELO3C007746.2	Melon (DHL92) v3.6.1	carmedB0418
Carg00704	CsaV3_6G045330	Cucumber (Chinese Long) v3	carcucB0442
Carg00704	Cla97C01G018060	Watermelon (97103) v2	carwmbB0426
Carg00704	Bhi03G000893	Wax gourd	carwgoB0491

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg00704	Silver-seed gourd	carcarB064
Carg00704	Silver-seed gourd	carcarB426
Carg00704	Silver-seed gourd	carcarB431
Carg00704	Cucumber (Gy14) v2	carcgybB0410
Carg00704	Cucumber (Gy14) v1	carcgyB0471
Carg00704	Cucumber (Gy14) v1	carcgyB0469
Carg00704	Cucurbita maxima (Rimu)	carcmaB0568
Carg00704	Cucurbita moschata (Rifu)	carcmoB0544
Carg00704	Cucurbita moschata (Rifu)	carcmoB0552
Carg00704	Cucurbita pepo (Zucchini)	carcpeB0554
Carg00704	Cucurbita pepo (Zucchini)	carcpeB0555
Carg00704	Cucurbita pepo (Zucchini)	carcpeB0557
Carg00704	Cucurbita pepo (Zucchini)	carcpeB0562
Carg00704	Cucurbita pepo (Zucchini)	carcpeB0563
Carg00704	Cucurbita pepo (Zucchini)	carcpeB0571
Carg00704	Wild cucumber (PI 183967)	carcpiB0437
Carg00704	Cucumber (Chinese Long) v2	carcuB0432
Carg00704	Cucumber (Chinese Long) v3	carcucB0434
Carg00704	Bottle gourd (USVL1VR-Ls)	carlsiB366
Carg00704	Bottle gourd (USVL1VR-Ls)	carlsiB370
Carg00704	Melon (DHL92) v3.5.1	carmeB0407
Carg00704	Melon (DHL92) v3.6.1	carmedB0411
Carg00704	Melon (DHL92) v3.6.1	carmedB0413
Carg00704	Watermelon (Charleston Gray)	carwcgB0402
Carg00704	Watermelon (97103) v1	carwmB0399
Carg00704	Watermelon (97103) v1	carwmB0408
Carg00704	Watermelon (97103) v2	carwmbB0431
Carg00704	Wax gourd	carwgoB0486
Carg00704	Wax gourd	carwgoB0495