Bhi03G000893 (gene) Wax gourd

NameBhi03G000893
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionEPIDERMAL PATTERNING FACTOR-like protein 1
Locationchr3 : 23917820 .. 23920481 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTACATGTAACACTTGCCCTATCAAAACCATACAATTTGGTGGCTACGGAAGGTAAGCAAGCTGGTGTTCAGACAGAGGAATGAAACAGCCAAGTTCGTCAGGTGCAGTTTATTGCTCTCTCTTTGCGTCTAAAGAATTTAAAAGCAGTGAAACACGATCAAAGAAAAAGAAGATCATTGAAGTCGTAATATTGCGAGAAATAGAGTAGGGTTTGGACTTTGGAGGGTTTTGATTTGTTCACAAGGATGCAGTCTTTATAATGGTCTGATCAATAGTCTGTAAAGTACATTGTGATTTTTACCGAGACTTAACAACTCCATGGCACTGGAACCAAGCAGTCTCAGGTACACTTTTCTCATACATGTTTTTGTATTTTCGTTGATTTATGGGAAAAAGAGACTGGTTAGGCTAAGAGAGTTCAGATGCAGAGAAAGTTTCCTTTTTTCTGCTCAGTGCTGACTGATTCACTGTTGAATTCCAAATGAACTCAGAAAACAGTTATCATATTTATGTTGATGAGAGGTTCATACGTTCAAGCTGAAAGGTAACAATAAATGTAAGGAAAAAATTGAAAATAAAATTCGCAAAACAAAAAAGGAGAACAAACAAAGAAAATTTAATTGTACATATGTAGAAAATACAATTCCCTTCCCCCCCCCGTGTGAATAAATAAATAAATCTTTATTCCTTCTCCGTGTGAATAAGGCTTTCAACTTTCGTGAAAGAGTCTTCTGAAGTTGGCCATCAGATCAGACTAGGGGTTCTTGAGGTTGAGTTTGCTCACTGCCGTCTCAGGCTCTTTTTCTTGGAGTTGGTAATGTTTCGGAATGATCTGATGCATGGTTGATAATTTAGTTGACTAATTGCCTTTTAAAAATAAATCAACAGATCTGGAGAGACAGTCGAGGAGTGTGGCAGAGTATTTGCAACATTTTTTTCGCCTTTAACGAGCAAACACTACATATTCTTTGTATTTAGGGCGACTTGATCTTCTAACTTGACACTTTTTTATTCATTTGGATCAACCATGGTCGCTTGAGTTCTGTAGAATTTTCAATATTTGATTATTTTTTCCAGTTGAATGTTGGTAGATTTCAATAGAGGCTTCCCCCCTCTTCATTTGGTAGTTGGTTCAAAGTTTTGAATCAAACCTAGCTAATCCACTTGCATTCTTAATTTAGATTTGCCAACTTGAGTATATTTAAATTAGTTTAGTCATATATGATCAAGTTATCGATCATAAAGTTAGAAGATTAAATCCTCGTCCTTACTTATTATTTTGAACAACCCCTCCCCCAAAAAATAGTGTCCTACTTTCCCAGTCATAAGTAATTGTTATATACATAGGATCACGAGAGATTTGAATTATAAATTGGAAGAAAAGCTAGCTTTGTAAATACTTGAAGTTATAGGCCAGAGATAAATAAATCTCGTTTATGAGCAACTTTGGCGCAATGAAACATTTAAGGAAAGAGCAATTGAAAATATGCTAGTTTGGATTTTATTGATTTATCTTGTGCTCATTATTCTTAGACATTGGCGTACCTTGGTAAATGAAGATAATGGTTTTATTAACAAGAATAACCAAAAAATTTGGTCCACAGTCAAAAGGAATACGGAGAGAGAGAGGCAAGGCAATAGAAAAGAAAAGAAATCTCAATGGGTCCAATCCATTCCATCAGCCACTATTGGTTGCTTGGGAGATGAGATGAGATGAGATGATGTAGTCGCTGCATGCCCATCAGCGCAGCGTTGAAATGTAAAATCAATGGCAGTGAAGATTGGAGAAGAGTGAAACAAATGCAAAGGGGAGAGTGGGTGAGTAAATGCGGTCCCTTTACAGCAGCCAGGCTAGTGATGGACAGTCTAAGGCTGTAGAATGGAAGAATAGGTCGTCCTTTGTATGTGATGTGGATACTCCAAATTTGTTTTCCCCCATTGTATTGTTCCTTTCACTGTTCTGCTGCAATCTGCCCTCTTACTCAGAACTTCTCTGCTCTCTCCTCTCTCGTTCCTGTCGGATAACTTATGACTCACCCACCCTTTCCTACACCAATTTATGCTATCTCTCTCTCGTCTCTCTCTTTCTGTTTCCCCTTGCACTTGCCTCTATTAAATGCTCATCTCTTCTCTCTCTCTCTCTCTCTTCCTCTCCCCTAGCCACTTTGTGGTTGTGGTGCAGTGGGTGGAAGTGGAACAAAGTAACAGAAAAATCTGGCAAATGGGTCTTTATTGCGTATGATTTTTACTCCTTTGCTTCGTTGGATCCATTAGTTCCGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTCTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCTCCTCCCAGAGTATGCCTTCTCTCTCTCTTCCATGGCTTTCTCAATCTTTCCATGTTTGCTATTTCTTTTTAGTGACTGTTTCTGAGTTTTTTCTTCTCCTGGTTTCATCAGGGTATATTTTTTGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAATGCAACGAGTGCCACCCATGCATGGCCGTTCAAGTGCCTAGCAATGCCCGGCCGCGCCAGCCGGTTGGATTCTCACTCGGCCTTGCCTATGAGATTTTTTGA

mRNA sequence

ATGGAAGCTACATGTAACACTTGCCCTATCAAAACCATACAATTTGGTGGCTACGGAAGTGGGTGGAAGTGGAACAAAGTAACAGAAAAATCTGGCAAATGGGTCTTTATTGCGTATGATTTTTACTCCTTTGCTTCGTTGGATCCATTAGTTCCGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTCTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCTCCTCCCAGAGGTATATTTTTTGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAATGCAACGAGTGCCACCCATGCATGGCCGTTCAAGTGCCTAGCAATGCCCGGCCGCGCCAGCCGGTTGGATTCTCACTCGGCCTTGCCTATGAGATTTTTTGA

Coding sequence (CDS)

ATGGAAGCTACATGTAACACTTGCCCTATCAAAACCATACAATTTGGTGGCTACGGAAGTGGGTGGAAGTGGAACAAAGTAACAGAAAAATCTGGCAAATGGGTCTTTATTGCGTATGATTTTTACTCCTTTGCTTCGTTGGATCCATTAGTTCCGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTCTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCTCCTCCCAGAGGTATATTTTTTGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAATGCAACGAGTGCCACCCATGCATGGCCGTTCAAGTGCCTAGCAATGCCCGGCCGCGCCAGCCGGTTGGATTCTCACTCGGCCTTGCCTATGAGATTTTTTGA

Protein sequence

MEATCNTCPIKTIQFGGYGSGWKWNKVTEKSGKWVFIAYDFYSFASLDPLVPGINDLMTTMNLPTVWATSLLILLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSNARPRQPVGFSLGLAYEIF
BLAST of Bhi03G000893 vs. Swiss-Prot
Match: sp|Q9LFT5|EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.3e-10
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 0

Query: 94  EDKTRLGSTPPSCHNKCNECHPCMAVQVPS 124
           EDK RLGSTPPSCHN+CN CHPCMA+QVP+
Sbjct: 43  EDKARLGSTPPSCHNRCNNCHPCMAIQVPT 72

BLAST of Bhi03G000893 vs. TAIR10
Match: AT5G10310.1 (unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-11
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 0

Query: 94  EDKTRLGSTPPSCHNKCNECHPCMAVQVPS 124
           EDK RLGSTPPSCHN+CN CHPCMA+QVP+
Sbjct: 43  EDKARLGSTPPSCHNRCNNCHPCMAIQVPT 72

BLAST of Bhi03G000893 vs. TrEMBL
Match: tr|A0A1S3B112|A0A1S3B112_CUCME (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103484960 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.4e-26
Identity = 77/85 (90.59%), Postives = 79/85 (92.94%), Query Frame = 0

Query: 39  YDFYSFASLDPLVPGINDLMTTMNLPTVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTR 98
           +   SFA LDP VPG+NDLMTTMNL TVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTR
Sbjct: 3   FTLLSFALLDPWVPGMNDLMTTMNLATVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTR 62

Query: 99  LGSTPPSCHNKCNECHPCMAVQVPS 124
           LGSTPPSCHNKCNECHPCMAVQVPS
Sbjct: 63  LGSTPPSCHNKCNECHPCMAVQVPS 87

BLAST of Bhi03G000893 vs. TrEMBL
Match: tr|A0A0A0KGR1|A0A0A0KGR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499820 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-20
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0

Query: 54  INDLMTTMNLPTVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTRLGSTPPSCHNKCNEC 113
           +NDLMTTMNL TVWATSLXXXXXXXXXXXXXXXXXRG+FFEDKTRLGSTPPSCHNKCNEC
Sbjct: 1   MNDLMTTMNLATVWATSLXXXXXXXXXXXXXXXXXRGMFFEDKTRLGSTPPSCHNKCNEC 60

Query: 114 HPCMAVQVPS 124
           HPCMAVQVPS
Sbjct: 61  HPCMAVQVPS 70

BLAST of Bhi03G000893 vs. TrEMBL
Match: tr|F6HJL0|F6HJL0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0391g00030 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.8e-12
Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 89  RGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQV---PSNARPRQPVGFSLGLAYEIF 143
           RG+ FE+KTRLGSTPPSCHNKCNECHPCMAVQV   PS++ PR  +G +  +  E F
Sbjct: 39  RGLLFEEKTRLGSTPPSCHNKCNECHPCMAVQVPTLPSHSGPR--LGLTATVPMEFF 93

BLAST of Bhi03G000893 vs. TrEMBL
Match: tr|V4SR35|V4SR35_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10027218mg PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.7e-11
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0

Query: 89  RGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSNARPR 129
           RG+ FEDKTRLGS PPSCHNKCN+CHPCMAVQVP+   P+
Sbjct: 34  RGLLFEDKTRLGSIPPSCHNKCNQCHPCMAVQVPTLPGPK 73

BLAST of Bhi03G000893 vs. TrEMBL
Match: tr|A0A2H5NEV4|A0A2H5NEV4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_038750 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.7e-11
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0

Query: 89  RGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSNARPR 129
           RG+ FEDKTRLGS PPSCHNKCN+CHPCMAVQVP+   P+
Sbjct: 32  RGLLFEDKTRLGSIPPSCHNKCNQCHPCMAVQVPTLPGPK 71

BLAST of Bhi03G000893 vs. NCBI nr
Match: XP_008440584.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 8.1e-26
Identity = 77/85 (90.59%), Postives = 79/85 (92.94%), Query Frame = 0

Query: 39  YDFYSFASLDPLVPGINDLMTTMNLPTVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTR 98
           +   SFA LDP VPG+NDLMTTMNL TVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTR
Sbjct: 3   FTLLSFALLDPWVPGMNDLMTTMNLATVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTR 62

Query: 99  LGSTPPSCHNKCNECHPCMAVQVPS 124
           LGSTPPSCHNKCNECHPCMAVQVPS
Sbjct: 63  LGSTPPSCHNKCNECHPCMAVQVPS 87

BLAST of Bhi03G000893 vs. NCBI nr
Match: KGN48738.1 (hypothetical protein Csa_6G499820 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 3.9e-20
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0

Query: 54  INDLMTTMNLPTVWATSLXXXXXXXXXXXXXXXXXRGIFFEDKTRLGSTPPSCHNKCNEC 113
           +NDLMTTMNL TVWATSLXXXXXXXXXXXXXXXXXRG+FFEDKTRLGSTPPSCHNKCNEC
Sbjct: 1   MNDLMTTMNLATVWATSLXXXXXXXXXXXXXXXXXRGMFFEDKTRLGSTPPSCHNKCNEC 60

Query: 114 HPCMAVQVPS 124
           HPCMAVQVPS
Sbjct: 61  HPCMAVQVPS 70

BLAST of Bhi03G000893 vs. NCBI nr
Match: XP_010646934.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera])

HSP 1 Score: 79.7 bits (195), Expect = 8.7e-12
Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 0

Query: 89  RGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQV---PSNARPRQPVGFSLGLAYEIF 143
           RG+ FE+KTRLGSTPPSCHNKCNECHPCMAVQV   PS++ PR  +G +  +  E F
Sbjct: 39  RGLLFEEKTRLGSTPPSCHNKCNECHPCMAVQVPTLPSHSGPR--LGLTATVPMEFF 93

BLAST of Bhi03G000893 vs. NCBI nr
Match: CBI29444.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 78.2 bits (191), Expect = 2.5e-11
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0

Query: 89  RGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQV---PSNARPR 129
           RG+ FE+KTRLGSTPPSCHNKCNECHPCMAVQV   PS++ PR
Sbjct: 61  RGLLFEEKTRLGSTPPSCHNKCNECHPCMAVQVPTLPSHSGPR 103

BLAST of Bhi03G000893 vs. NCBI nr
Match: XP_006426361.1 (EPIDERMAL PATTERNING FACTOR-like protein 1 [Citrus clementina] >ESR39601.1 hypothetical protein CICLE_v10027218mg [Citrus clementina] >KDO60726.1 hypothetical protein CISIN_1g047936mg [Citrus sinensis])

HSP 1 Score: 77.0 bits (188), Expect = 5.7e-11
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0

Query: 89  RGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSNARPR 129
           RG+ FEDKTRLGS PPSCHNKCN+CHPCMAVQVP+   P+
Sbjct: 34  RGLLFEDKTRLGSIPPSCHNKCNQCHPCMAVQVPTLPGPK 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|Q9LFT5|EPFL1_ARATH3.3e-1083.33EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Match NameE-valueIdentityDescription
AT5G10310.11.8e-1183.33unknown protein[more]
Match NameE-valueIdentityDescription
tr|A0A1S3B112|A0A1S3B112_CUCME5.4e-2690.59EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Cucumis melo OX=3656 GN=LOC1034849... [more]
tr|A0A0A0KGR1|A0A0A0KGR1_CUCSA2.6e-2095.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499820 PE=4 SV=1[more]
tr|F6HJL0|F6HJL0_VITVI5.8e-1264.91Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0391g00030 PE=4 SV=... [more]
tr|V4SR35|V4SR35_9ROSI3.7e-1177.50Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10027218mg PE=4 ... [more]
tr|A0A2H5NEV4|A0A2H5NEV4_CITUN3.7e-1177.50Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_038750 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008440584.18.1e-2690.59PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo][more]
KGN48738.13.9e-2095.71hypothetical protein Csa_6G499820 [Cucumis sativus][more]
XP_010646934.18.7e-1264.91PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera][more]
CBI29444.32.5e-1179.07unnamed protein product, partial [Vitis vinifera][more]
XP_006426361.15.7e-1177.50EPIDERMAL PATTERNING FACTOR-like protein 1 [Citrus clementina] >ESR39601.1 hypot... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0005507 copper ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M000893Bhi03M000893mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 98..123
e-value: 7.8E-11
score: 41.7
NoneNo IPR availablePANTHERPTHR33109FAMILY NOT NAMEDcoord: 69..125
NoneNo IPR availablePANTHERPTHR33109:SF3EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1coord: 69..125

The following gene(s) are paralogous to this gene:

None