CmoCh07G005530 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G005530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	EPIDERMAL PATTERNING FACTOR-like protein 1
Location	Cmo_Chr07 : 2488400 .. 2491716 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTTTCCATTTTTCTGCTGGGTGTGACTGATTTACTGTTGAATCTCAAAAGAAATCAGAAAGAAGTAATCATGTTTATGTTGATTAGATCTTAAAAAGCTACAGCAAAAAGGTATTTATTTTGGGTCTTTTGCAAAAATAATATGTGCGAGGATGTAATAGTTGGTAGGGAAAAATAGTATTAAAAAAACATGGAGAAGAACAAGGAAATACCCCCACAGCATATGTCATTAGGTAAAATCTCATCTGTACATATGAGTATACCTTATGCCTTCTTGAGAGTAGGAGTGACTGACTTACTCGATTCTATGCCTCAATGATGGACATAATATTTTTATTATGAACATCCTCTTCAACTTGAGAACCTTACAAGTTCTAATCCATCGACCTTTCGTTGAGTTATCCTTAGCATTGTATGAGCAAAACTCAATTTGTTTATAACCATAATTCTAGATCAATGAATTTATCAGATAATGTCTTCTGCTACTTTTGGCTTGGCCTGAGTTGATTTAGTTAGATTATACGAATATGTCTTTGCTTAGTCATGTCTAGTTCATGAAATCTGTACATGGAGACACACTCTGGTCTCTTGTTAGCTGCTTAGGGTAGTTAGATTATACCAATCGTTGTTTGCTTATCATATCTTGACCTCCCCAACTTGGCCTAAGTATCTAAACCTCCATCGCTTACAATTTATTTCTTTGTCGGGCCAACTCAAAAACTCAATGGCTATATACCTTCATCACTCGCTTGACTTATTGATGGTGTTTTGACAAACACCACGTTGATTCTAGTTTTGCTACTTATAGGCGGATGCTAGATCCCCACATCTACTATCATCGGGAAAATCAAGATTATACCTCTAAAAAAATAGAAAAAATGGAAGCAATGCAATTATTAATCTTAGAATTTTCAATACATTATTAGTTACAAACTCGAGAAAGGGACAAACCTCGTTTTAAGCACCTGTTCGTGCCACTATGAACAGCGTTCGAGATTCCGATATCCAAATAAAGTTTGCTTCATGATTTTTAAAGAAATTATACATTCTCCGTGAGAGCAAGGGTTTCAGAGTAGAGAGCCAAAATTCATTTCGGCATGGGTTCTCTTCCCTCGATTTCTTTCCCACTTCGTGAAAGAGTCCTACGAAGTTGAAAAAGCTAAAAGTACTCCTCTTGTGTTTTCTTCTTCTTTGGCCTTCAGAATCAGACGAGGGGTTCTGGAGTTGAGTTTGCTCACTGCGTCTCAGACTCTGTTTCTTGGAGTTTTGTAATGTTTTGGAATGGTCTGATGCATGGTTGATAATTTAGTTGACTAGTTGCCCTGCAAAAATAAATCAGCACATCTGGTGAGACAGGCGAGCAATGTGGCTGGGGACATCCGATCAAATTGATACAATACAGAGAAGATTAGCATGACCCTTACGCAAAGATACACGCACAAATTGAGAAATGTATCAAAATCAAACACTGTTTAGTGTGCTAGTGAGAATGCTGGGTTCTCAAGAGGATGAATTGTTAGATTCCACATCGGTTGTTAGATCCCAACCTCTCCATAGTAGATGCGTTTTAAAATCGTGAGGTTGACGACAATACGTAATTGATAAAAACGGACGATATTTGCTAGTGGTGGATTTCTTTTCACCTTTAACGAGCAAACACAACGTATTTTTTTTTATTATTATTATACATCATTATATTATATTTAGGATGGCTAGGATGTTTTAACATGACACTTTTTGATTCATTTTGGATCAATTAGGTGGCTACAGATCTATAGAATTTGATAATATTTTGCCCAGTTGGATGTTAGTGGGTTGTAGTACTAGGTTTTCTTTTTCCTTTTCTTGGATTTTGTAGTTAGGTTTAGGCTAAATTTGATTCTTTTAGCCGAGACATAAATATTTTCAAATACCTCATGAAGTTATAGCCAAGAGATAACTACATCTCCTTTATGAGCAACTTTGGTGCAATGAGGCATTTAAGGAAGAGTAATTGAGTAAATGCTAGTTTGGAGTTTAGTGATTCAAATCTGTGCTCGATATTCTTGAACATTGGTACATTCGTAGATGGGGAGAAGGGTTTTATGAACAAGAATAACAAATAAATTTGGTCCACAGTCAAATGTGAAATCTCGATGGTCCAATCCATCAGCTATTATTTCTTGCTTAGTTGCAAGATGAGATGAGGTAGTCGCTGCATGGCCATCAGCGCAGCGTTGAAATGTAAAATCAATGGGCAGTGAAGATTGAAGAAGAGTGAAACAAATGCAAAGTGGAGAGTAGGGGAGTAAATGCGGTCCCTTTGCAGCAGCCAGGCTAGTGATGGACAGCCTAATGTTGCATAGTGGAAGAATAGGGCGTCCTTTGGATGTGATGTGGATACTACTGTATTGTTCCTTTCACTGTCTGCTACACTCTGTCCTCTTACTCAGAACTTCTCTGCTTTCTCTCTTCTCTTGTTCTTGTCGGATAACTTATGACTCACCCACCCTTTCCTACCCAAATTTATGCTAACTCTCTCTCCTTTGCACTTGCCTCTATTAAATGTTCATCACTCTCTCTCTCTCTTAGTTACTTGTGGAGTGGTGTGGTGTGGTGTGTTGGGTGGAAGTGGATCAAAGTAACAGAAAAATCTGGCAACTGGGTCTTTATTGCATATGATTTTTTTACTCCTTTGCTGCAATGGATCCATGAGTTTTGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTTCATCTTCTTCTTTTTCTCTCCGCCTCTTCCCCTTCCAGGGTGTGCCTTCTTTCTCTCTTCCATGAATTTTCTCATATTGCTCGTTACTTTATTCCTGAGCTTCGTTGTTTTGGTTGCTTGCTGATTTGATCAGGGTATATTTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCACAACAAGTGCAACGAGTGTCATCCATGCATGGCGGTGCAAGTTCCTAGCATGCCTCGGATGGATTCGCATTCACCCTCGGCCTTGCCATTGGGATTTTTTGACTCATCCTCACAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGGAACCACTTCTTCAATCCTTGAGCCATATTTGCATGTCCAAAACACAGGGTTGGTCTCCCATTCTTCTGGTTTATGTAAATGACATTGAATTGTTTCTTTTTTTCATTATAAGGATGGAATTCTTTGTTCAGAGTGAAAGCAGGTCGTTTGGTTTCTGCATTTATTGTACATAAACCTTCTACCCTTAACCCC

mRNA sequence

AAGTTTCCATTTTTCTGCTGGGTGTGACTGATTTACTGTTGAATCTCAAAAGAAATCAGAAAGAAGTAATCATGTTTATGTTGATTAGATCTTAAAAAGCTACAGCAAAAAGGTATTTATTTTGGGTCTTTTGCAAAAATAATATGTGCGAGGATGTAATAGTTGGTAGGGAAAAATAGTATTAAAAAAACATGGAGAAGAACAAGGAAATACCCCCACAGCATATGTCATTAGGTAAAATCTCATCTGTACATATGAGTATACCTTATGCCTTCTTGAGAGTAGGAGTGACTGACTTACTCGATTCTATGCCTCAATGATGGACATAATATTTTTATTATGAACATCCTCTTCAACTTGAGAACCTTACAAGTTCTAATCCATCGACCTTTCGTTGAGTTATCCTTAGCATTGTATGAGCAAAACTCAATTTGTTTATAACCATAATTCTAGATCAATGAATTTATCAGATAATGTCTTCTGCTACTTTTGGCTTGGCCTGAGTTGATTTAGTTAGATTATACGAATATGTCTTTGCTTAGTCATGTCTAGTTCATGAAATCTGTACATGGAGACACACTCTGGTCTCTTGTTAGCTGCTTAGGGTAGTTAGATTATACCAATCGTTGTTTGCTTATCATATCTTGACCTCCCCAACTTGGCCTAAGTATCTAAACCTCCATCGCTTACAATTTATTTCTTTGTCGGGCCAACTCAAAAACTCAATGGCTATATACCTTCATCACTCGCTTGACTTATTGATGGTGTTTTGACAAACACCACGTTGATTCTAGTTTTGCTACTTATAGGCGGATGCTAGATCCCCACATCTACTATCATCGGGAAAATCAAGATTATACCTCTAAAAAAATAGAAAAAATGGAAGCAATGCAATTATTAATCTTAGAATTTTCAATACATTATTAGTTACAAACTCGAGAAAGGGACAAACCTCGTTTTAAGCACCTGTTCGTGCCACTATGAACAGCGTTCGAGATTCCGATATCCAAATAAAGTTTGCTTCATGATTTTTAAAGAAATTATACATTCTCCGTGAGAGCAAGGGTTTCAGAGTAGAGAGCCAAAATTCATTTCGGCATGGGTTCTCTTCCCTCGATTTCTTTCCCACTTCGTGAAAGAGTCCTACGAAGTTGAAAAAGCTAAAAGTACTCCTCTTGTGTTTTCTTCTTCTTTGGCCTTCAGAATCAGACGAGGGGTTCTGGAGTTGAGTTTGCTCACTGCGTCTCAGACTCTGTTTCTTGGAGTTTTGTAATGTTTTGGAATGGTCTGATGCATGGTTGATAATTTAGTTGACTAGTTGCCCTGCAAAAATAAATCAGCACATCTGGTGAGACAGGCGAGCAATGTGGCTGGGGACATCCGATCAAATTGATACAATACAGAGAAGATTAGCATGACCCTTACGCAAAGATACACGCACAAATTGAGAAATGTATCAAAATCAAACACTGTTTAGTGTGCTAGTGAGAATGCTGGGTTCTCAAGAGGATGAATTGTTAGATTCCACATCGGTTGTTAGATCCCAACCTCTCCATAGTAGATGCGTTTTAAAATCGTGAGGTTGACGACAATACGTAATTGATAAAAACGGACGATATTTGCTAGTGGTGGATTTCTTTTCACCTTTAACGAGCAAACACAACGTATTTTTTTTTATTATTATTATACATCATTATATTATATTTAGGATGGCTAGGATGTTTTAACATGACACTTTTTGATTCATTTTGGATCAATTAGGTGGCTACAGATCTATAGAATTTGATAATATTTTGCCCAGTTGGATGTTAGTGGGTTGTAGTACTAGGTTTTCTTTTTCCTTTTCTTGGATTTTGTAGTTAGGTTTAGGCTAAATTTGATTCTTTTAGCCGAGACATAAATATTTTCAAATACCTCATGAAGTTATAGCCAAGAGATAACTACATCTCCTTTATGAGCAACTTTGGTGCAATGAGGCATTTAAGGAAGAGTAATTGAGTAAATGCTAGTTTGGAGTTTAGTGATTCAAATCTGTGCTCGATATTCTTGAACATTGGTACATTCGTAGATGGGGAGAAGGGTTTTATGAACAAGAATAACAAATAAATTTGGTCCACAGTCAAATGTGAAATCTCGATGGTCCAATCCATCAGCTATTATTTCTTGCTTAGTTGCAAGATGAGATGAGGTAGTCGCTGCATGGCCATCAGCGCAGCGTTGAAATGTAAAATCAATGGGCAGTGAAGATTGAAGAAGAGTGAAACAAATGCAAAGTGGAGAGTAGGGGAGTAAATGCGGTCCCTTTGCAGCAGCCAGGCTAGTGATGGACAGCCTAATGTTGCATAGTGGAAGAATAGGGCGTCCTTTGGATGTGATGTGGATACTACTGTATTGTTCCTTTCACTGTCTGCTACACTCTGTCCTCTTACTCAGAACTTCTCTGCTTTCTCTCTTCTCTTGTTCTTGTCGGATAACTTATGACTCACCCACCCTTTCCTACCCAAATTTATGCTAACTCTCTCTCCTTTGCACTTGCCTCTATTAAATGTTCATCACTCTCTCTCTCTCTTAGTTACTTGTGGAGTGGTGTGGTGTGGTGTGTTGGGTGGAAGTGGATCAAAGTAACAGAAAAATCTGGCAACTGGGTCTTTATTGCATATGATTTTTTTACTCCTTTGCTGCAATGGATCCATGAGTTTTGGGCATCAATGACTTGATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTTCATCTTCTTCTTTTTCTCTCCGCCTCTTCCCCTTCCAGGGGTATATTTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCACAACAAGTGCAACGAGTGTCATCCATGCATGGCGGTGCAAGTTCCTAGCATGCCTCGGATGGATTCGCATTCACCCTCGGCCTTGCCATTGGGATTTTTTGACTCATCCTCACAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGGAACCACTTCTTCAATCCTTGAGCCATATTTGCATGTCCAAAACACAGGGTTGGTCTCCCATTCTTCTGGTTTATGTAAATGACATTGAATTGTTTCTTTTTTTCATTATAAGGATGGAATTCTTTGTTCAGAGTGAAAGCAGGTCGTTTGGTTTCTGCATTTATTGTACATAAACCTTCTACCCTTAACCCC

Coding sequence (CDS)

ATGACTACCATGAATTTGCCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTTCATCTTCTTCTTTTTCTCTCCGCCTCTTCCCCTTCCAGGGGTATATTTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCACAACAAGTGCAACGAGTGTCATCCATGCATGGCGGTGCAAGTTCCTAGCATGCCTCGGATGGATTCGCATTCACCCTCGGCCTTGCCATTGGGATTTTTTGACTCATCCTCACAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGGAACCACTTCTTCAATCCTTGA

Homology

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BLAST of CmoCh07G005530 vs. Swiss-Prot
Match: EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = 1


Query: 11  ATSLLIVLLHLLL-------FLSASSPS---RGIFFEDKTRLGSTPPSCHNKCNECHPCM 70
           +T LL+ L+ +LL       FL    P    +    EDK RLGSTPPSCHN+CN CHPCM
Sbjct: 7   STLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCM 66

Query: 71  AVQVPSMP-RMDSHSPSALPLGFFDSSSQ----GNRYSFYKPLGWKCRCGNHFFNP 112
           A+QVP++P R      +    GF    S      ++YS YKP+GWKC C  HF+NP
Sbjct: 67  AIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CmoCh07G005530 vs. Swiss-Prot
Match: EPFL2_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 8.1e-09
Identity = 28/76 (36.84%), Postives = 41/76 (53.95%), Query Frame = 1


Query: 42  LGSTPPSCHN-KCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSS-----SQGNRYSFY 101
           +GS PP C   +C  C  C A+QVP+ P+   HSP          +     ++G+  + Y
Sbjct: 53  IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNY 112

Query: 102 KPLGWKCRCGNHFFNP 112
           KP+ WKC+CGN  +NP
Sbjct: 113 KPMSWKCKCGNSIYNP 128

[Close]

BLAST of CmoCh07G005530 vs. Swiss-Prot
Match: EPFL3_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 24/66 (36.36%), Postives = 33/66 (50.00%), Query Frame = 1


Query: 39  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPL 98
           + R+GS PPSC  KC  C PC A+Q P++  +   SP                Y+ Y+P 
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSP---------------HYANYQPE 104

Query: 99  GWKCRC 105
           GW+C C
Sbjct: 114 GWRCHC 104

[Close]

BLAST of CmoCh07G005530 vs. Swiss-Prot
Match: EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 24/69 (34.78%), Postives = 35/69 (50.72%), Query Frame = 1


Query: 43  GSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPLGWKC 102
           GS+PP+C +KC +C PC  V VP  P +      ++PL ++             P  W+C
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGL------SMPLEYY-------------PEAWRC 109

Query: 103 RCGNHFFNP 112
           +CGN  F P
Sbjct: 120 KCGNKLFMP 109

[Close]

BLAST of CmoCh07G005530 vs. TrEMBL
Match: A0A0A0KGR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499820 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.9e-51
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 1


Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSASSPSRGIFFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL TVWATSLLIVLLHLLL LSASSP RG+FFEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRMDSH--SPSALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           AVQVPSMP   S   SPSALP+ FFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CmoCh07G005530 vs. TrEMBL
Match: C6SZ30_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G134100 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-27
Identity = 68/115 (59.13%), Postives = 79/115 (68.70%), Query Frame = 1


Query: 12  TSLLIVLL-HLLLFLSASSPS---------RGIFFEDKTRLGSTPPSCHNKCNECHPCMA 71
           TSLLI+LL H L  LS +S S         R + FE+K RLGS PPSCHNKCN+CHPCMA
Sbjct: 13  TSLLIILLLHNLFSLSLASASNHPQPAISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMA 72

Query: 72  VQVPSMPRMDSHSP-----SALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           VQVP++P  DS+ P     +A+      SS QGNRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VQVPTLPSHDSNPPDLTKTAAMATFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 127

[Close]

BLAST of CmoCh07G005530 vs. TrEMBL
Match: A0A0B2RA79_GLYSO (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Glycine soja GN=glysoja_008379 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-27
Identity = 68/115 (59.13%), Postives = 79/115 (68.70%), Query Frame = 1


Query: 12  TSLLIVLL-HLLLFLSASSPS---------RGIFFEDKTRLGSTPPSCHNKCNECHPCMA 71
           TSLLI+LL H L  LS +S S         R + FE+K RLGS PPSCHNKCN+CHPCMA
Sbjct: 13  TSLLIILLLHNLFSLSLASASNHPQPAISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMA 72

Query: 72  VQVPSMPRMDSHSP-----SALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           VQVP++P  DS+ P     +A+      SS QGNRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VQVPTLPSHDSNPPDLTKTAAMATFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 127

[Close]

BLAST of CmoCh07G005530 vs. TrEMBL
Match: V7CQQ4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G257600g PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.0e-27
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 1


Query: 12  TSLLIVL-LHLLLFLSASS-------PSRGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQ 71
           TSLLIVL LH  L L ++S        +R + FE+K RLGS PPSCHNKCN+CHPCMAVQ
Sbjct: 13  TSLLIVLVLHNFLSLVSASNHPHTSISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 72  VPSMPRMDSHSP-----SALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           VP++P  DS+ P     SA+      SS QGNRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMASFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

[Close]

BLAST of CmoCh07G005530 vs. TrEMBL
Match: F6HJL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0391g00030 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.8e-27
Identity = 66/126 (52.38%), Postives = 87/126 (69.05%), Query Frame = 1


Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSA-------SSPSRGIFFEDKTRLGSTPPSCHNKC 60
           M ++    ++  +++  +LHLLL  ++       S  +RG+ FE+KTRLGSTPPSCHNKC
Sbjct: 1   MNSLGSYLLYTITVVTAVLHLLLSPASCFSQQQGSDSTRGLLFEEKTRLGSTPPSCHNKC 60

Query: 61  NECHPCMAVQVPSMPRMDSHS------PSALPLGFFDS--SSQGNRYSFYKPLGWKCRCG 112
           NECHPCMAVQVP++P   SHS       + +P+ FF+S  S+  NRYS YKPLGWKC CG
Sbjct: 61  NECHPCMAVQVPTLP---SHSGPRLGLTATVPMEFFESSPSTAANRYSNYKPLGWKCHCG 120

[Close]

BLAST of CmoCh07G005530 vs. TAIR10
Match: AT5G10310.1 (AT5G10310.1 unknown protein)

HSP 1 Score: 94.0 bits (232), Expect = 6.3e-20
Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = 1


Query: 11  ATSLLIVLLHLLL-------FLSASSPS---RGIFFEDKTRLGSTPPSCHNKCNECHPCM 70
           +T LL+ L+ +LL       FL    P    +    EDK RLGSTPPSCHN+CN CHPCM
Sbjct: 7   STLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCM 66

Query: 71  AVQVPSMP-RMDSHSPSALPLGFFDSSSQ----GNRYSFYKPLGWKCRCGNHFFNP 112
           A+QVP++P R      +    GF    S      ++YS YKP+GWKC C  HF+NP
Sbjct: 67  AIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CmoCh07G005530 vs. TAIR10
Match: AT4G37810.1 (AT4G37810.1 unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 4.6e-10
Identity = 28/76 (36.84%), Postives = 41/76 (53.95%), Query Frame = 1


Query: 42  LGSTPPSCHN-KCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSS-----SQGNRYSFY 101
           +GS PP C   +C  C  C A+QVP+ P+   HSP          +     ++G+  + Y
Sbjct: 53  IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNY 112

Query: 102 KPLGWKCRCGNHFFNP 112
           KP+ WKC+CGN  +NP
Sbjct: 113 KPMSWKCKCGNSIYNP 128

[Close]

BLAST of CmoCh07G005530 vs. TAIR10
Match: AT3G13898.1 (AT3G13898.1 unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 7.3e-08
Identity = 24/66 (36.36%), Postives = 33/66 (50.00%), Query Frame = 1


Query: 39  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPL 98
           + R+GS PPSC  KC  C PC A+Q P++  +   SP                Y+ Y+P 
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTISSIPHLSP---------------HYANYQPE 104

Query: 99  GWKCRC 105
           GW+C C
Sbjct: 114 GWRCHC 104

[Close]

BLAST of CmoCh07G005530 vs. TAIR10
Match: AT4G14723.1 (AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1))

HSP 1 Score: 53.9 bits (128), Expect = 7.3e-08
Identity = 24/69 (34.78%), Postives = 35/69 (50.72%), Query Frame = 1


Query: 43  GSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPLGWKC 102
           GS+PP+C +KC +C PC  V VP  P +      ++PL ++             P  W+C
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGL------SMPLEYY-------------PEAWRC 109

Query: 103 RCGNHFFNP 112
           +CGN  F P
Sbjct: 120 KCGNKLFMP 109

[Close]

BLAST of CmoCh07G005530 vs. TAIR10
Match: AT2G30370.1 (AT2G30370.1 allergen-related)

HSP 1 Score: 47.4 bits (111), Expect = 6.8e-06
Identity = 24/70 (34.29%), Postives = 31/70 (44.29%), Query Frame = 1


Query: 42  LGSTPPSCHNKCNECHPCMAVQVPSMPRMDSHSPSALPLGFFDSSSQGNRYSFYKPLGWK 101
           LGS+PP C +KC  C PC  V VP         P   P+            + Y P  W+
Sbjct: 180 LGSSPPRCSSKCGRCTPCKPVHVP--------VPPGTPV-----------TAEYYPEAWR 230

Query: 102 CRCGNHFFNP 112
           C+CGN  + P
Sbjct: 240 CKCGNKLYMP 230

[Close]

BLAST of CmoCh07G005530 vs. NCBI nr
Match: gi|700193534|gb|KGN48738.1| (hypothetical protein Csa_6G499820 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 8.5e-51
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 1


Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSASSPSRGIFFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL TVWATSLLIVLLHLLL LSASSP RG+FFEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRMDSH--SPSALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           AVQVPSMP   S   SPSALP+ FFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CmoCh07G005530 vs. NCBI nr
Match: gi|659080050|ref|XP_008440584.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 3.2e-50
Identity = 101/113 (89.38%), Postives = 102/113 (90.27%), Query Frame = 1


Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSASSPSRGIFFEDKTRLGSTPPSCHNKCNECHPCM 60
           MTTMNL TVWATSLLIVLLHLLL LSASSP RGIFFEDKTRLGSTPPSCHNKCNECHPCM
Sbjct: 22  MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPRMDSH--SPSALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           AVQVPSMP   S   S SALP+ FFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]

BLAST of CmoCh07G005530 vs. NCBI nr
Match: gi|645219144|ref|XP_008234219.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Prunus mume])

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-27
Identity = 68/121 (56.20%), Postives = 85/121 (70.25%), Query Frame = 1


Query: 2   TTMNLPT--VWATSLLIVLLHLLLFLSASSPS----RGIFFEDKTRLGSTPPSCHNKCNE 61
           T MN P   ++  +  I+LLH LL   AS  S    RG+ FE+KTRLGSTPPSCH+KCN+
Sbjct: 5   TAMNNPLYLLFKATRAIMLLHFLLLSPASCFSTHSLRGLLFEEKTRLGSTPPSCHSKCNQ 64

Query: 62  CHPCMAVQVPSMP---RMDSHSPSALPLGFFDSSSQG--NRYSFYKPLGWKCRCGNHFFN 112
           CHPCMAVQVP++P   R+++    + P+ FFD S  G  N+YS YKPLGWKC CG+HFFN
Sbjct: 65  CHPCMAVQVPTIPSHDRVETGMTRSFPMMFFDPSHPGTNNKYSNYKPLGWKCHCGDHFFN 124

[Close]

BLAST of CmoCh07G005530 vs. NCBI nr
Match: gi|951005401|ref|XP_014508135.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vigna radiata var. radiata])

HSP 1 Score: 129.8 bits (325), Expect = 3.0e-27
Identity = 68/125 (54.40%), Postives = 83/125 (66.40%), Query Frame = 1


Query: 1   MTTMNLPTVWATSLLIVLLHLLLFLSASSPS---------RGIFFEDKTRLGSTPPSCHN 60
           M ++N    + T+ L+++L L  FLS  S S         R + FE+K RLGS PPSCHN
Sbjct: 1   MASLNSYHYYTTTSLLIVLLLHNFLSLVSASNHPHTAISPRELLFEEKNRLGSIPPSCHN 60

Query: 61  KCNECHPCMAVQVPSMPRMDSHSP-----SALPLGFFDSSSQGNRYSFYKPLGWKCRCGN 112
           KCN+CHPCMAVQVP++P  DS+ P     SA+   F  SS QGNRYS YKPLGWKC CG+
Sbjct: 61  KCNDCHPCMAVQVPTLPSHDSNPPDLTKTSAMATFFNPSSPQGNRYSNYKPLGWKCHCGD 120

[Close]

BLAST of CmoCh07G005530 vs. NCBI nr
Match: gi|470103522|ref|XP_004288185.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 129.0 bits (323), Expect = 5.0e-27
Identity = 65/109 (59.63%), Postives = 76/109 (69.72%), Query Frame = 1


Query: 11  ATSLLIVLLHLLLFLSASS---PSRGIFFEDKTRLGSTPPSCHNKCNECHPCMAVQVPSM 70
           AT   IVLL LLL LS +S     RG+ F +K RLGS PPSCHNKCN+CHPCMAVQVP+M
Sbjct: 25  ATRATIVLLLLLLVLSPASCFTSLRGLLFAEKARLGSKPPSCHNKCNQCHPCMAVQVPTM 84

Query: 71  PRMDSHSP-----SALPLGFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 112
           P  D   P      A P+  FD + + NRYS YKPLGWKC+CG+HF+NP
Sbjct: 85  PSHDRVKPVGKTRPAKPMMLFDPAHRDNRYSNYKPLGWKCQCGDHFYNP 133

The following BLAST results are available for this feature:

BLAST of CmoCh07G005530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EPFL1_ARATH	1.1e-18	45.69	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1...	[more]
EPFL2_ARATH	8.1e-09	36.84	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2...	[more]
EPFL3_ARATH	1.3e-06	36.36	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana GN=EPFL3 PE=1...	[more]
EPFL4_ARATH	1.3e-06	34.78	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1...	[more]

BLAST of CmoCh07G005530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGR1_CUCSA	5.9e-51	89.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499820 PE=4 SV=1	[more]
C6SZ30_SOYBN	3.5e-27	59.13	Uncharacterized protein OS=Glycine max GN=GLYMA_08G134100 PE=2 SV=1	[more]
A0A0B2RA79_GLYSO	3.5e-27	59.13	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Glycine soja GN=glysoja_008379 PE=...	[more]
V7CQQ4_PHAVU	6.0e-27	60.18	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G257600g PE=4 SV=1	[more]
F6HJL0_VITVI	7.8e-27	52.38	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0391g00030 PE=4 SV=...	[more]

BLAST of CmoCh07G005530 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10310.1	6.3e-20	45.69	unknown protein	[more]
AT4G37810.1	4.6e-10	36.84	unknown protein	[more]
AT3G13898.1	7.3e-08	36.36	unknown protein	[more]
AT4G14723.1	7.3e-08	34.78	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:A...	[more]
AT2G30370.1	6.8e-06	34.29	allergen-related	[more]

BLAST of CmoCh07G005530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700193534\|gb\|KGN48738.1\|	8.5e-51	89.38	hypothetical protein Csa_6G499820 [Cucumis sativus]	[more]
gi\|659080050\|ref\|XP_008440584.1\|	3.2e-50	89.38	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]	[more]
gi\|645219144\|ref\|XP_008234219.1\|	2.3e-27	56.20	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Prunus mume]	[more]
gi\|951005401\|ref\|XP_014508135.1\|	3.0e-27	54.40	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vigna radiata var. radiat...	[more]
gi\|470103522\|ref\|XP_004288185.1\|	5.0e-27	59.63	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Fragaria vesca subsp. ves...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010374	stomatal complex development
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005507	copper ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G005530.1	CmoCh07G005530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 86..111 score: 5.4E-39coord: 14..68 score: 5.4
None	No IPR available	PANTHER	PTHR33109:SF3	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1	coord: 14..68 score: 5.4E-39coord: 86..111 score: 5.4
None	No IPR available	PFAM	PF17181	EPF	coord: 41..111 score: 9.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G005530	Cucsa.104290	Cucumber (Gy14) v1	cgycmoB0233
CmoCh07G005530	CmaCh03G008110	Cucurbita maxima (Rimu)	cmacmoB667
CmoCh07G005530	CmaCh07G005490	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G005530	Cla014135	Watermelon (97103) v1	cmowmB816
CmoCh07G005530	Csa6G499820	Cucumber (Chinese Long) v2	cmocuB865
CmoCh07G005530	MELO3C007746	Melon (DHL92) v3.5.1	cmomeB793
CmoCh07G005530	ClCG01G018670	Watermelon (Charleston Gray)	cmowcgB755
CmoCh07G005530	CSPI06G30130	Wild cucumber (PI 183967)	cmocpiB873
CmoCh07G005530	Lsi01G007810	Bottle gourd (USVL1VR-Ls)	cmolsiB774
CmoCh07G005530	MELO3C007746.2	Melon (DHL92) v3.6.1	cmomedB896
CmoCh07G005530	CsaV3_6G045330	Cucumber (Chinese Long) v3	cmocucB1019
CmoCh07G005530	Cla97C01G018060	Watermelon (97103) v2	cmowmbB849
CmoCh07G005530	Bhi03G000893	Wax gourd	cmowgoB1065
CmoCh07G005530	CsGy6G029600	Cucumber (Gy14) v2	cgybcmoB843
CmoCh07G005530	Carg00704	Silver-seed gourd	carcmoB0554

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G005530	CmoCh03G008570	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G005530	Cucurbita moschata (Rifu)	cmocmoB163
CmoCh07G005530	Cucumber (Gy14) v1	cgycmoB0464
CmoCh07G005530	Melon (DHL92) v3.5.1	cmomeB774
CmoCh07G005530	Watermelon (Charleston Gray)	cmowcgB776
CmoCh07G005530	Cucurbita pepo (Zucchini)	cmocpeB828
CmoCh07G005530	Cucurbita pepo (Zucchini)	cmocpeB806
CmoCh07G005530	Cucurbita pepo (Zucchini)	cmocpeB813
CmoCh07G005530	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G005530	Bottle gourd (USVL1VR-Ls)	cmolsiB793
CmoCh07G005530	Silver-seed gourd	carcmoB1029
CmoCh07G005530	Cucumber (Chinese Long) v3	cmocucB0993