CmoCh03G008570 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G008570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	EPIDERMAL PATTERNING FACTOR-like protein 1
Location	Cmo_Chr03 : 6725289 .. 6725906 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTCTTGTGCTTGTACATCTTCTTCTTCTTCTCTCGGCCTCTCCTCCTCCCATAGTATGCCTTCTCTTTCTCTTTCTCTTCCATGGCTTTCTTTCCATTTTTTTAATGTTTCTTTTAATGACAAGTTTTTATGCTTGCTGGTTTGATCAGGGTATATCTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCGCCCATGCATGGCGGTGCAGGTGCCTAGTATGCCTCGCCGTGCCGGCCGGTTGGATTCGCCCTCGGCTTTGCCAATGAGATTTTTTGACTCGTCTCCTCAAGGGAACAGATACTCATTTTACAAGCCATTGAGTTGGAAATGCCGCTGTGGGAACCGCTTCTTCAATCCTTAGACCAAATTGCATGTCCTGTATGGAGGCTTGGTCTTCCTTTCATTCCCCCTGGTTTTGTAAATGGCATTGAATTGTTTCTTTTTTTAATAGAAGGATGGAATTCTTTGTTCAGAGAGAAGCAAGATGTTCGTTTTTATTTTTATTTTGTGACATAATTTTATAAGAAAAGTTTGATCCCAC

mRNA sequence

ATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTCTTGTGCTTGTACATCTTCTTCTTCTTCTCTCGGCCTCTCCTCCTCCCATAGGTATATCTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCGCCCATGCATGGCGGTGCAGGTGCCTAGTATGCCTCGCCGTGCCGGCCGGTTGGATTCGCCCTCGGCTTTGCCAATGAGATTTTTTGACTCGTCTCCTCAAGGGAACAGATACTCATTTTACAAGCCATTGAGTTGGAAATGCCGCTGTGGGAACCGCTTCTTCAATCCTTAGACCAAATTGCATGTCCTGTATGGAGGCTTGGTCTTCCTTTCATTCCCCCTGGTTTTGTAAATGGCATTGAATTGTTTCTTTTTTTAATAGAAGGATGGAATTCTTTGTTCAGAGAGAAGCAAGATGTTCGTTTTTATTTTTATTTTGTGACATAATTTTATAAGAAAAGTTTGATCCCAC

Coding sequence (CDS)

ATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTCTTGTGCTTGTACATCTTCTTCTTCTTCTCTCGGCCTCTCCTCCTCCCATAGGTATATCTTTCGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCGCCCATGCATGGCGGTGCAGGTGCCTAGTATGCCTCGCCGTGCCGGCCGGTTGGATTCGCCCTCGGCTTTGCCAATGAGATTTTTTGACTCGTCTCCTCAAGGGAACAGATACTCATTTTACAAGCCATTGAGTTGGAAATGCCGCTGTGGGAACCGCTTCTTCAATCCTTAG

Homology

[Close]

BLAST of CmoCh03G008570 vs. Swiss-Prot
Match: EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.7e-18
Identity = 53/123 (43.09%), Postives = 68/123 (55.28%), Query Frame = 1


Query: 11  ATSLLLVLVHLLLL-------LSASPPPIGIS---FEDKTRLGSTPPSCHNKCNECRPCM 70
           +T LLL L+ +LL+       L    PPI       EDK RLGSTPPSCHN+CN C PCM
Sbjct: 7   STLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCM 66

Query: 71  AVQVPSMPRRA----------GRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRF 114
           A+QVP++P R+          G +  PS+L           ++YS YKP+ WKC C   F
Sbjct: 67  AIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVL-------DQYSNYKPMGWKCHCNGHF 122

[Close]

BLAST of CmoCh03G008570 vs. Swiss-Prot
Match: EPFL2_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.0e-08
Identity = 38/125 (30.40%), Postives = 59/125 (47.20%), Query Frame = 1


Query: 5   NLATVWATSLLLVLVHLLLLLSASPPPIGISFED----------KTRLGSTPPSCHN-KC 64
           N+++     L+L   H  L+ +  P P  + F            +  +GS PP C   +C
Sbjct: 6   NMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRC 65

Query: 65  NECRPCMAVQVPSMPRRAGRLDSP-----SALPMRFFDSSPQGNRYSFYKPLSWKCRCGN 114
             C  C A+QVP+ P+   +L SP     S+          +G+  + YKP+SWKC+CGN
Sbjct: 66  RSCGHCEAIQVPTNPQT--KLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGN 125

[Close]

BLAST of CmoCh03G008570 vs. Swiss-Prot
Match: EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06
Identity = 24/71 (33.80%), Postives = 35/71 (49.30%), Query Frame = 1


Query: 43  GSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSW 102
           GS+PP+C +KC +C+PC  V VP  P  +  L+                     Y P +W
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLE---------------------YYPEAW 109

Query: 103 KCRCGNRFFNP 114
           +C+CGN+ F P
Sbjct: 120 RCKCGNKLFMP 109

[Close]

BLAST of CmoCh03G008570 vs. TrEMBL
Match: A0A0A0KGR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499820 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-51
Identity = 101/113 (89.38%), Postives = 104/113 (92.04%), Query Frame = 1


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECRPCM 60
           MTTMNLATVWATSLL+VL+HLLLLLSAS PP G+ FEDKTRLGSTPPSCHNKCNEC PCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDSPSALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CmoCh03G008570 vs. TrEMBL
Match: A0A059B7S9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04752 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-25
Identity = 67/108 (62.04%), Postives = 73/108 (67.59%), Query Frame = 1


Query: 14  LLLVLVHLLLLLSASPPPI----GISFEDKTRLGSTPPSCHNKCNECRPCMAVQVPSMPR 73
           LLL+L HLLL     PPP     G+SFE+KTRLGSTPPSCHNKCN C PCMAVQVPS+P 
Sbjct: 24  LLLLLCHLLL-----PPPSFPRQGLSFEEKTRLGSTPPSCHNKCNGCHPCMAVQVPSLPA 83

Query: 74  RAGR---LDSPSALPMRFFDSSPQG-NRYSFYKPLSWKCRCGNRFFNP 114
            AGR       ++ P  F D SP    RYS YKPL WKCRC NR FNP
Sbjct: 84  AAGREKMKREEASRPAEFVDPSPASPGRYSNYKPLGWKCRCRNRLFNP 126

[Close]

BLAST of CmoCh03G008570 vs. TrEMBL
Match: F6HJL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0391g00030 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.6e-25
Identity = 63/123 (51.22%), Postives = 83/123 (67.48%), Query Frame = 1


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSA-------SPPPIGISFEDKTRLGSTPPSCHNKC 60
           M ++    ++  +++  ++HLLL  ++       S    G+ FE+KTRLGSTPPSCHNKC
Sbjct: 1   MNSLGSYLLYTITVVTAVLHLLLSPASCFSQQQGSDSTRGLLFEEKTRLGSTPPSCHNKC 60

Query: 61  NECRPCMAVQVPSMPRRAG-RLDSPSALPMRFFDSSPQ--GNRYSFYKPLSWKCRCGNRF 114
           NEC PCMAVQVP++P  +G RL   + +PM FF+SSP    NRYS YKPL WKC CG+ F
Sbjct: 61  NECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPSTAANRYSNYKPLGWKCHCGDHF 120

[Close]

BLAST of CmoCh03G008570 vs. TrEMBL
Match: V7CQQ4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G257600g PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.4e-23
Identity = 66/113 (58.41%), Postives = 75/113 (66.37%), Query Frame = 1


Query: 12  TSLLLVLV--HLLLLLSASPPP-IGIS-----FEDKTRLGSTPPSCHNKCNECRPCMAVQ 71
           TSLL+VLV  + L L+SAS  P   IS     FE+K RLGS PPSCHNKCN+C PCMAVQ
Sbjct: 13  TSLLIVLVLHNFLSLVSASNHPHTSISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 72  VPSMPRRAGR---LDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           VP++P        L   SA+      SSPQGNRYS YKPL WKC CG+ FFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMASFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

[Close]

BLAST of CmoCh03G008570 vs. TrEMBL
Match: A0A061DHS7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_001076 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.3e-23
Identity = 56/90 (62.22%), Postives = 63/90 (70.00%), Query Frame = 1


Query: 29  PP--PIGISFEDKTRLGSTPPSCHNKCNECRPCMAVQVPSMP---RRAGRLDSPSALPMR 88
           PP  P G+SFE+KTRLGSTPPSCHNKCN C PCMAVQVP++P   R    L       M+
Sbjct: 49  PPNSPRGLSFEEKTRLGSTPPSCHNKCNGCHPCMAVQVPTLPSHERFQPGLSKGITNSMQ 108

Query: 89  FFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           F D  P GN+YS YKPL WKCRCG  F+NP
Sbjct: 109 FLD--PSGNQYSNYKPLGWKCRCGKNFYNP 136

[Close]

BLAST of CmoCh03G008570 vs. TAIR10
Match: AT5G10310.1 (AT5G10310.1 unknown protein)

HSP 1 Score: 91.7 bits (226), Expect = 3.2e-19
Identity = 53/123 (43.09%), Postives = 68/123 (55.28%), Query Frame = 1


Query: 11  ATSLLLVLVHLLLL-------LSASPPPIGIS---FEDKTRLGSTPPSCHNKCNECRPCM 70
           +T LLL L+ +LL+       L    PPI       EDK RLGSTPPSCHN+CN C PCM
Sbjct: 7   STLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCM 66

Query: 71  AVQVPSMPRRA----------GRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRF 114
           A+QVP++P R+          G +  PS+L           ++YS YKP+ WKC C   F
Sbjct: 67  AIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVL-------DQYSNYKPMGWKCHCNGHF 122

[Close]

BLAST of CmoCh03G008570 vs. TAIR10
Match: AT4G37810.1 (AT4G37810.1 unknown protein)

HSP 1 Score: 58.2 bits (139), Expect = 3.9e-09
Identity = 38/125 (30.40%), Postives = 59/125 (47.20%), Query Frame = 1


Query: 5   NLATVWATSLLLVLVHLLLLLSASPPPIGISFED----------KTRLGSTPPSCHN-KC 64
           N+++     L+L   H  L+ +  P P  + F            +  +GS PP C   +C
Sbjct: 6   NMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCERVRC 65

Query: 65  NECRPCMAVQVPSMPRRAGRLDSP-----SALPMRFFDSSPQGNRYSFYKPLSWKCRCGN 114
             C  C A+QVP+ P+   +L SP     S+          +G+  + YKP+SWKC+CGN
Sbjct: 66  RSCGHCEAIQVPTNPQT--KLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGN 125

[Close]

BLAST of CmoCh03G008570 vs. TAIR10
Match: AT4G14723.1 (AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1))

HSP 1 Score: 53.5 bits (127), Expect = 9.7e-08
Identity = 24/71 (33.80%), Postives = 35/71 (49.30%), Query Frame = 1


Query: 43  GSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSW 102
           GS+PP+C +KC +C+PC  V VP  P  +  L+                     Y P +W
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLE---------------------YYPEAW 109

Query: 103 KCRCGNRFFNP 114
           +C+CGN+ F P
Sbjct: 120 RCKCGNKLFMP 109

[Close]

BLAST of CmoCh03G008570 vs. TAIR10
Match: AT3G13898.1 (AT3G13898.1 unknown protein)

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06
Identity = 25/68 (36.76%), Postives = 35/68 (51.47%), Query Frame = 1


Query: 39  KTRLGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYK 98
           + R+GS PPSC  KC  C PC A+Q P++          S++P      SP    Y+ Y+
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTI----------SSIP----HLSP---HYANYQ 104

Query: 99  PLSWKCRC 107
           P  W+C C
Sbjct: 114 PEGWRCHC 104

[Close]

BLAST of CmoCh03G008570 vs. TAIR10
Match: AT2G30370.1 (AT2G30370.1 allergen-related)

HSP 1 Score: 48.5 bits (114), Expect = 3.1e-06
Identity = 24/72 (33.33%), Postives = 33/72 (45.83%), Query Frame = 1


Query: 42  LGSTPPSCHNKCNECRPCMAVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLS 101
           LGS+PP C +KC  C PC  V VP           P   P+            + Y P +
Sbjct: 180 LGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVT-----------AEYYPEA 230

Query: 102 WKCRCGNRFFNP 114
           W+C+CGN+ + P
Sbjct: 240 WRCKCGNKLYMP 230

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: gi|700193534|gb|KGN48738.1| (hypothetical protein Csa_6G499820 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-51
Identity = 101/113 (89.38%), Postives = 104/113 (92.04%), Query Frame = 1


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECRPCM 60
           MTTMNLATVWATSLL+VL+HLLLLLSAS PP G+ FEDKTRLGSTPPSCHNKCNEC PCM
Sbjct: 5   MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNECHPCM 64

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDSPSALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 65  AVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: gi|659080050|ref|XP_008440584.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 6.7e-51
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 1


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSASPPPIGISFEDKTRLGSTPPSCHNKCNECRPCM 60
           MTTMNLATVWATSLL+VL+HLLLLLSAS PP GI FEDKTRLGSTPPSCHNKCNEC PCM
Sbjct: 22  MTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNECHPCM 81

Query: 61  AVQVPSMPRRAGRLDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           AVQVPSMP RA RLDS SALPMRFFDSS QGNRYSFYKPL WKCRCGN FFNP
Sbjct: 82  AVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: gi|702450058|ref|XP_010025427.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Eucalyptus grandis])

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-25
Identity = 67/108 (62.04%), Postives = 73/108 (67.59%), Query Frame = 1


Query: 14  LLLVLVHLLLLLSASPPPI----GISFEDKTRLGSTPPSCHNKCNECRPCMAVQVPSMPR 73
           LLL+L HLLL     PPP     G+SFE+KTRLGSTPPSCHNKCN C PCMAVQVPS+P 
Sbjct: 24  LLLLLCHLLL-----PPPSFPRQGLSFEEKTRLGSTPPSCHNKCNGCHPCMAVQVPSLPA 83

Query: 74  RAGR---LDSPSALPMRFFDSSPQG-NRYSFYKPLSWKCRCGNRFFNP 114
            AGR       ++ P  F D SP    RYS YKPL WKCRC NR FNP
Sbjct: 84  AAGREKMKREEASRPAEFVDPSPASPGRYSNYKPLGWKCRCRNRLFNP 126

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: gi|731438809|ref|XP_010646934.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera])

HSP 1 Score: 122.9 bits (307), Expect = 3.7e-25
Identity = 63/123 (51.22%), Postives = 83/123 (67.48%), Query Frame = 1


Query: 1   MTTMNLATVWATSLLLVLVHLLLLLSA-------SPPPIGISFEDKTRLGSTPPSCHNKC 60
           M ++    ++  +++  ++HLLL  ++       S    G+ FE+KTRLGSTPPSCHNKC
Sbjct: 1   MNSLGSYLLYTITVVTAVLHLLLSPASCFSQQQGSDSTRGLLFEEKTRLGSTPPSCHNKC 60

Query: 61  NECRPCMAVQVPSMPRRAG-RLDSPSALPMRFFDSSPQ--GNRYSFYKPLSWKCRCGNRF 114
           NEC PCMAVQVP++P  +G RL   + +PM FF+SSP    NRYS YKPL WKC CG+ F
Sbjct: 61  NECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPSTAANRYSNYKPLGWKCHCGDHF 120

[Close]

BLAST of CmoCh03G008570 vs. NCBI nr
Match: gi|951005401|ref|XP_014508135.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vigna radiata var. radiata])

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-23
Identity = 66/113 (58.41%), Postives = 76/113 (67.26%), Query Frame = 1


Query: 12  TSLLLVLV--HLLLLLSASPPP-IGIS-----FEDKTRLGSTPPSCHNKCNECRPCMAVQ 71
           TSLL+VL+  + L L+SAS  P   IS     FE+K RLGS PPSCHNKCN+C PCMAVQ
Sbjct: 13  TSLLIVLLLHNFLSLVSASNHPHTAISPRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 72  VPSMPRRAGR---LDSPSALPMRFFDSSPQGNRYSFYKPLSWKCRCGNRFFNP 114
           VP++P        L   SA+   F  SSPQGNRYS YKPL WKC CG+ FFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMATFFNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

The following BLAST results are available for this feature:

BLAST of CmoCh03G008570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EPFL1_ARATH	5.7e-18	43.09	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1...	[more]
EPFL2_ARATH	7.0e-08	30.40	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2...	[more]
EPFL4_ARATH	1.7e-06	33.80	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1...	[more]

BLAST of CmoCh03G008570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGR1_CUCSA	1.2e-51	89.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499820 PE=4 SV=1	[more]
A0A059B7S9_EUCGR	1.5e-25	62.04	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04752 PE=4 SV=1	[more]
F6HJL0_VITVI	2.6e-25	51.22	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0391g00030 PE=4 SV=...	[more]
V7CQQ4_PHAVU	2.4e-23	58.41	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G257600g PE=4 SV=1	[more]
A0A061DHS7_THECC	5.3e-23	62.22	Uncharacterized protein OS=Theobroma cacao GN=TCM_001076 PE=4 SV=1	[more]

BLAST of CmoCh03G008570 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10310.1	3.2e-19	43.09	unknown protein	[more]
AT4G37810.1	3.9e-09	30.40	unknown protein	[more]
AT4G14723.1	9.7e-08	33.80	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:A...	[more]
AT3G13898.1	2.4e-06	36.76	unknown protein	[more]
AT2G30370.1	3.1e-06	33.33	allergen-related	[more]

BLAST of CmoCh03G008570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700193534\|gb\|KGN48738.1\|	1.8e-51	89.38	hypothetical protein Csa_6G499820 [Cucumis sativus]	[more]
gi\|659080050\|ref\|XP_008440584.1\|	6.7e-51	89.38	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]	[more]
gi\|702450058\|ref\|XP_010025427.1\|	2.2e-25	62.04	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Eucalyptus grandis]	[more]
gi\|731438809\|ref\|XP_010646934.1\|	3.7e-25	51.22	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera]	[more]
gi\|951005401\|ref\|XP_014508135.1\|	1.5e-23	58.41	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vigna radiata var. radiat...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010374	stomatal complex development
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005507	copper ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G008570.1	CmoCh03G008570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 30..68 score: 1.5E-35coord: 88..113 score: 1.5
None	No IPR available	PANTHER	PTHR33109:SF3	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1	coord: 30..68 score: 1.5E-35coord: 88..113 score: 1.5
None	No IPR available	PFAM	PF17181	EPF	coord: 41..113 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G008570	Cucsa.104290	Cucumber (Gy14) v1	cgycmoB0227
CmoCh03G008570	CmaCh03G008110	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G008570	CmaCh07G005490	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G008570	Cla014135	Watermelon (97103) v1	cmowmB623
CmoCh03G008570	Csa6G499820	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G008570	MELO3C007746	Melon (DHL92) v3.5.1	cmomeB605
CmoCh03G008570	ClCG01G018670	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G008570	CSPI06G30130	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G008570	Lsi01G007810	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G008570	MELO3C007746.2	Melon (DHL92) v3.6.1	cmomedB694
CmoCh03G008570	CsaV3_6G045330	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G008570	Cla97C01G018060	Watermelon (97103) v2	cmowmbB642
CmoCh03G008570	Bhi03G000893	Wax gourd	cmowgoB0792
CmoCh03G008570	CsGy6G029600	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G008570	Carg00704	Silver-seed gourd	carcmoB0551

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G008570	CmoCh07G005530	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G008570	Watermelon (97103) v2	cmowmbB672
CmoCh03G008570	Wax gourd	cmowgoB0774
CmoCh03G008570	Wax gourd	cmowgoB0808
CmoCh03G008570	Cucurbita moschata (Rifu)	cmocmoB451
CmoCh03G008570	Cucurbita moschata (Rifu)	cmocmoB452
CmoCh03G008570	Cucumber (Gy14) v1	cgycmoB0459
CmoCh03G008570	Cucurbita maxima (Rimu)	cmacmoB727
CmoCh03G008570	Cucurbita maxima (Rimu)	cmacmoB784
CmoCh03G008570	Wild cucumber (PI 183967)	cmocpiB651
CmoCh03G008570	Cucumber (Chinese Long) v2	cmocuB639
CmoCh03G008570	Melon (DHL92) v3.5.1	cmomeB587
CmoCh03G008570	Watermelon (Charleston Gray)	cmowcgB600
CmoCh03G008570	Watermelon (97103) v1	cmowmB609
CmoCh03G008570	Cucurbita pepo (Zucchini)	cmocpeB639
CmoCh03G008570	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G008570	Cucurbita pepo (Zucchini)	cmocpeB607
CmoCh03G008570	Cucurbita pepo (Zucchini)	cmocpeB613
CmoCh03G008570	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G008570	Bottle gourd (USVL1VR-Ls)	cmolsiB602
CmoCh03G008570	Bottle gourd (USVL1VR-Ls)	cmolsiB607
CmoCh03G008570	Cucumber (Gy14) v2	cgybcmoB227
CmoCh03G008570	Cucumber (Gy14) v2	cgybcmoB381
CmoCh03G008570	Melon (DHL92) v3.6.1	cmomedB673
CmoCh03G008570	Melon (DHL92) v3.6.1	cmomedB679
CmoCh03G008570	Silver-seed gourd	carcmoB0086
CmoCh03G008570	Silver-seed gourd	carcmoB1028
CmoCh03G008570	Cucumber (Chinese Long) v3	cmocucB0762
CmoCh03G008570	Cucumber (Chinese Long) v3	cmocucB0770