Carg21761 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTGCAGCAACAGAGCCCATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGACGACGATCTGGGGCAAAAGAAGCTGCGACCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGTTCAGAGAGTGCAGCAATGGAGAGGACGAGAAGAATTGCAAGTTGAAGCAGAATAAAACTGGGTTTGGAGGGTGGATGAACTTGTTGGGTAATTTGTCTTGTAAGCACTTGACGGCGGTTCGAGATGACAGTTTGATTAGCTCCCCTGTTTCCAAACGAACCGTGTAGACGAAAGAAGCATGGCGTAGCTTGTAATATTTATAGAATTAGACCTTTGTAAAATTCAATAAGGATTACAACTTTGGTTGTATGGACATGATTTTCAATATATTTTAATATTCAAATGTGAAATTCATTTTTACTTTTTGTTTGATAATTTTGTATTTTTTAAAATTGTGTTTGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAATTAAACACTTAAATTTCTAGTTTATTTATTTATTTTTTTCAAGATTCAACTTAAAAATCAATTTATGGAAATAGATATATAGGAGTGTTTATAGTTTTCTACTATTAAAATATGCGTTTGTTTAATTTCTATATTTATTGACATTACATTTAAATTTGTAAATTTGTAGTCAAATTAAAAAAAAAATAAAAACAAAAATTTATTATTCAACTTTAAAAACGAATTCGCGGTGAAAGTCAAAGACAGCCTACAGAAGGCCTGACCGGCGAACGGTGGTTCCGACAAATAGCGACCATTATATATAGATCGGCGAGGGCGAATTTTAGTAAAGTCCATTACGAAAGGGGTTAATTCTGGAACGCGGTAAATAATTTTTTAGCCGCCGATAACTCCCCCCTCTCAACTTCTCCGTACTCTCAATCAGTTCCATCTCTGCCACTTCCTCGCTTAAACCCTAAAAACTCGATTTTACCCACAGCTTCGTGATCCGACCACTCCGGTTTCTTACCCGCTACCATACTGGGTTTGGCGCCACCAATTTTCCCACCGCAACTTCAAACAACAGCCGTAACTGTGAGTAATCTCCCTCTCTCTTTATCTCTAGGCGCTTTGGGTTATTGGATTCTGCATCTTCCATCTAGTTTCATAGAAAATTTCCGGCAACGGGAAGGGATTTGAAAAACCATGTTTAACGAGGAGATGGGTTCGTCACAAATATTGATATTTGGTTATATGCTTTAAGAACACCGCGGTTTACCTCAAGGAAGTGACGTCTAGTGGTAGAAAATGATTCGGGTTTGCAGAAGCATCGGGGAGCTAATTGTATTCTTCATCACTCCTTCGATAGGAATCGATGTCTCTTGTGAATCGGTCTATCATTTTTCCGCTGTGTCATTCTCCGTCATGCCAATTTACTGTTGTAACATTGTGATTTCTTGGAGATTTTTAATCTTAAGAGTGAAGTGTGCGGTGATATTCTCACTCACGCTGCATGCGATTGGTTTGGTTCTTCTATCCCCGCTACGCATTTGGAGGTTGAGAATGTATTGGAAACAAGAAAGATGATGGGACAAGATGTTCCGTTGTTTATTCACTTCTTTGTGATCTAACTGTTGTTCATTTTCATGCCTAACCATACGGGTTTTTTCGTCATAAATAACGTTTTGAGACGTTCAGTTTACGAAATTCTGACGTATTTTCTAGTTCTCTTCCTGCTTTCTTTAATATTTCTATGTTGTTTGCAGTTGGGTCTCTATTTCTTGCTTTTGGTGGGCTTCAACTGGAAGTTGGCTTAGCTGATCTGTTGGTATTGTGA ATGACCTGCAGCAACAGAGCCCATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGACGACGATCTGGGGCAAAAGAAGCTGCGACCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGTTCAGAGAGTGCAGCAATGGAGAGGACGAGAAGAATTGCAAGTTGAAGCAGAATAAAACTGGCTTCGTGATCCGACCACTCCGGTTTCTTACCCGCTACCATACTGGGTTTGGCGCCACCAATTTTCCCACCGCAACTTCAAACAACAGCCGTAACTTTGGGTCTCTATTTCTTGCTTTTGGTGGGCTTCAACTGGAAGTTGGCTTAGCTGATCTGTTGGTATTGTGA ATGACCTGCAGCAACAGAGCCCATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGACGACGATCTGGGGCAAAAGAAGCTGCGACCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGTTCAGAGAGTGCAGCAATGGAGAGGACGAGAAGAATTGCAAGTTGAAGCAGAATAAAACTGGCTTCGTGATCCGACCACTCCGGTTTCTTACCCGCTACCATACTGGGTTTGGCGCCACCAATTTTCCCACCGCAACTTCAAACAACAGCCGTAACTTTGGGTCTCTATTTCTTGCTTTTGGTGGGCTTCAACTGGAAGTTGGCTTAGCTGATCTGTTGGTATTGTGA MTCSNRAHSRGRVAFSWENKPGECKAAVAPPFYRLGDDDLGQKKLRPPPCTSARKGQKKVQKDGVFEDPFLAAFRECSNGEDEKNCKLKQNKTGFVIRPLRFLTRYHTGFGATNFPTATSNNSRNFGSLFLAFGGLQLEVGLADLLVL
BLAST of Carg21761 vs. NCBI nr
Match: KGN55294.1 (hypothetical protein Csa_4G644710 [Cucumis sativus]) HSP 1 Score: 144.4 bits (363), Expect = 3.0e-31 Identity = 65/95 (68.42%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of Carg21761 vs. NCBI nr
Match: KDO43921.1 (hypothetical protein CISIN_1g044566mg, partial [Citrus sinensis]) HSP 1 Score: 62.0 bits (149), Expect = 2.0e-06 Identity = 42/114 (36.84%), Postives = 57/114 (50.00%), Query Frame = 0
BLAST of Carg21761 vs. NCBI nr
Match: ESR41328.1 (hypothetical protein CICLE_v10027255mg [Citrus clementina]) HSP 1 Score: 60.8 bits (146), Expect = 4.4e-06 Identity = 43/126 (34.13%), Postives = 62/126 (49.21%), Query Frame = 0
BLAST of Carg21761 vs. NCBI nr
Match: KOM32442.1 (hypothetical protein LR48_Vigan01g199800 [Vigna angularis] >BAT75708.1 hypothetical protein VIGAN_01361800 [Vigna angularis var. angularis]) HSP 1 Score: 60.5 bits (145), Expect = 5.7e-06 Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 0
BLAST of Carg21761 vs. NCBI nr
Match: XP_007155803.1 (hypothetical protein PHAVU_003G233000g [Phaseolus vulgaris] >ESW27797.1 hypothetical protein PHAVU_003G233000g [Phaseolus vulgaris]) HSP 1 Score: 58.9 bits (141), Expect = 1.7e-05 Identity = 38/116 (32.76%), Postives = 57/116 (49.14%), Query Frame = 0
BLAST of Carg21761 vs. TrEMBL
Match: tr|A0A0A0L2M9|A0A0A0L2M9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644710 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 2.0e-31 Identity = 65/95 (68.42%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of Carg21761 vs. TrEMBL
Match: tr|A0A067DZ74|A0A067DZ74_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g044566mg PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-06 Identity = 42/114 (36.84%), Postives = 57/114 (50.00%), Query Frame = 0
BLAST of Carg21761 vs. TrEMBL
Match: tr|V4S1V1|V4S1V1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10027255mg PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06 Identity = 43/126 (34.13%), Postives = 62/126 (49.21%), Query Frame = 0
BLAST of Carg21761 vs. TrEMBL
Match: tr|A0A0L9TPV9|A0A0L9TPV9_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g199800 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.8e-06 Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 0
BLAST of Carg21761 vs. TrEMBL
Match: tr|A0A0S3R542|A0A0S3R542_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G361800 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.8e-06 Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |