CmoCh09G003090 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTGCAGCAACAGAGCCAATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGACGACGATCTGGGGCAAAAGAAGCTGCGACCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGTTCAGAGAGTGCAGCAATGGAGAGGACGAGAAGAATTGCAAGTTGAAGCAGAATAAAACTGAGTTTGGAGGGTGGATGAACTTGTTGGGTAATTTGTCTTGTAAGCACTTGAGGGCGGTTCGAGATGACAGTTTGATTAGCTCCCCTGTTTCCAAACTAACCATGTAGACGAAAGAAGCATGGCGTAGCTTGTACTATTTATAGAATTAGACCTTTGTAAAATTCAATAAGGATTACAACTTTTTGTTTATAATTTGTGGCTTAGATGCATTAAGGTTTGGTTGTATGGACATGATTTTCAATATATTTTAATATTCAAATGTGAAATTCATTTTTACTTTTTGTTTGATAATTTTGTATTTTTTAAAATTGTGTTTGGAGTTTTTTTATTTTTTATTTTTTCCTAATTAAACACTTAAATTTCTAGTTTATTTTTATTTTTTCAAGATTCAACTCAAAAATCAATTTATGGAAATAGATATATAGGAGTGTTTATAGTTTTCTACTTTTAAAATATGCGTTTGTTTAATTTCTATATTTATTGGCATTACATTTAAATTTGTAAATTTGTAGTCAAATTAAAAAAAATAAAAACAAAAATTTATTATTCAACTTTAAAAACGAATTCGCGGTGAAAGTCAAAGACAGCCTACAGAAGGCCTGACCGGCGAACGGTGGTTCCGACAGATAGCGACCATTATATATAGATCGGCGAGGGCGAATTTTAGTAAAGTCCATTACGAAAGGGGTTAATTCTGGAACGCGGTAAATAATTTTTTAGCCGCCGATAACTCCCCCCTCTCAACTTCTCCGTACTCTCGATCAGTTCCATCTCTGCCACTTCCTCGCTTAAACCCTAAAAACTCGATTTTACCCACAGCTTCGTGATCCGACCACTCCGGTTTCTTACCCGCTACCATACTGGGTTTGGCGCCACCAATTTTCCCACCGCAACTTCAAACAACAGCCGTAACTGTGAGTAATCTCCCTCTCTCTTTATCTCTAGGCGCTTTGGGTTATTGGATTCTGCATCTTCCATCTAGTTTCATAGAAAATTTCCGGCAACGGGAAGGGATTTGAAAAACCATGTTTAACGAGGAGATGGGTTCGTCACAAATATTGATATTTGGTTATATTCTTTAAGAACACCGCGGTTTACCTCAAGGAAGTGACGTCTAGTGGTAGAAAATGATTCGGGTTTGCAGAAGCATCGGGGAGCTAATTGTATTCTTCATCACTCCTTCGATAGGAATCGATGTCTCTTGTGAATCGGTCTATCATTTTTCCGCTGTGTCATTCTCCGTCATGCCAATTTACTGTTATGCGGTAACATTGTGATTTCTTGGAGATTGTTAATCTTAAGAGTGAAGTGTGCGGTGATATTCTCACTCACGCTGCATGCGATTGGTTTGTTTCTTCTATCCCCGCTACGAATTTGGAGGTTGAGAATGTATTAGGAAACAAGAAAGATGATGGGACAAGATGTTCCGTTGTTTATTCACTTCTTCGTGATCTAACAGTTGTTCATTCCATGCCTAACCATTCGGGTTTTTTTCGTCATAAATAACGTTTTGAGACGTTCAGTTTACGAAATTCTGACATATTTTCTAGTTCTCTTCCTGCTTTCTTTAATATTTCTATGTTGTTTGCAGTTGGGTCTCTATTTCTTGCTTTTGGTGGGCTTCAACTGGAAGTTGGCTTAGCTGATCTGTTGGTATTGTGA ATGACCTGCAGCAACAGAGCCAATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGACGACGATCTGGGGCAAAAGAAGCTGCGACCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGTTCAGAGAGTGCAGCAATGGAGAGGACGAGAAGAATTGCAAGTTGAAGCAGAATAAAACTGAGTTTGGAGGGTGGATGAACTTGTTGGGTAATTTGTCTTGTAAGCACTTGAGGGCGGTTCGAGATGACAGTTTGATTAGCTCCCCTGTTTCCAAACTAACCATCTTCGTGATCCGACCACTCCGGTTTCTTACCCGCTACCATACTGGGTTTGGCGCCACCAATTTTCCCACCGCAACTTCAAACAACAGCCGTAACTTTGGGTCTCTATTTCTTGCTTTTGGTGGGCTTCAACTGGAAGTTGGCTTAGCTGATCTGTTGGTATTGTGA ATGACCTGCAGCAACAGAGCCAATTCGAGAGGCAGAGTGGCTTTCTCGTGGGAGAATAAGCCAGGGGAGTGCAAGGCAGCAGTGGCGCCGCCGTTTTACCGCCTGGGCGACGACGATCTGGGGCAAAAGAAGCTGCGACCACCGCCGTGTACTTCGGCGAGAAAGGGCCAGAAGAAGGTGCAGAAAGATGGGGTCTTTGAAGACCCTTTTCTTGCGGCGTTCAGAGAGTGCAGCAATGGAGAGGACGAGAAGAATTGCAAGTTGAAGCAGAATAAAACTGAGTTTGGAGGGTGGATGAACTTGTTGGGTAATTTGTCTTGTAAGCACTTGAGGGCGGTTCGAGATGACAGTTTGATTAGCTCCCCTGTTTCCAAACTAACCATCTTCGTGATCCGACCACTCCGGTTTCTTACCCGCTACCATACTGGGTTTGGCGCCACCAATTTTCCCACCGCAACTTCAAACAACAGCCGTAACTTTGGGTCTCTATTTCTTGCTTTTGGTGGGCTTCAACTGGAAGTTGGCTTAGCTGATCTGTTGGTATTGTGA
BLAST of CmoCh09G003090 vs. TrEMBL
Match: A0A0A0L2M9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G644710 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.4e-43 Identity = 88/130 (67.69%), Postives = 103/130 (79.23%), Query Frame = 1
BLAST of CmoCh09G003090 vs. TrEMBL
Match: E0CNY8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08660 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 7.1e-09 Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 1
BLAST of CmoCh09G003090 vs. TrEMBL
Match: A0A059BJ61_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00095 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.1e-08 Identity = 50/153 (32.68%), Postives = 68/153 (44.44%), Query Frame = 1
BLAST of CmoCh09G003090 vs. TrEMBL
Match: A0A061FEE8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_034658 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.3e-07 Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 1
BLAST of CmoCh09G003090 vs. TrEMBL
Match: A0A0D2MAP2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G136100 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-07 Identity = 49/137 (35.77%), Postives = 62/137 (45.26%), Query Frame = 1
BLAST of CmoCh09G003090 vs. NCBI nr
Match: gi|700200136|gb|KGN55294.1| (hypothetical protein Csa_4G644710 [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 6.3e-43 Identity = 88/130 (67.69%), Postives = 103/130 (79.23%), Query Frame = 1
BLAST of CmoCh09G003090 vs. NCBI nr
Match: gi|731428900|ref|XP_010664483.1| (PREDICTED: uncharacterized protein LOC104882514 [Vitis vinifera]) HSP 1 Score: 68.9 bits (167), Expect = 1.0e-08 Identity = 52/149 (34.90%), Postives = 72/149 (48.32%), Query Frame = 1
BLAST of CmoCh09G003090 vs. NCBI nr
Match: gi|629100793|gb|KCW66262.1| (hypothetical protein EUGRSUZ_F00095 [Eucalyptus grandis]) HSP 1 Score: 67.4 bits (163), Expect = 3.0e-08 Identity = 50/153 (32.68%), Postives = 68/153 (44.44%), Query Frame = 1
BLAST of CmoCh09G003090 vs. NCBI nr
Match: gi|590596796|ref|XP_007018435.1| (Uncharacterized protein TCM_034658 [Theobroma cacao]) HSP 1 Score: 63.9 bits (154), Expect = 3.3e-07 Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 1
BLAST of CmoCh09G003090 vs. NCBI nr
Match: gi|823133604|ref|XP_012466641.1| (PREDICTED: uncharacterized protein LOC105785227 [Gossypium raimondii]) HSP 1 Score: 63.5 bits (153), Expect = 4.3e-07 Identity = 49/137 (35.77%), Postives = 62/137 (45.26%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |