Carg07185 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGGCAAAATGGTAACTTCGTAGAAAGTGGGGGCGAAATGAGCATCACTTAAGCAAGCAAGACAGCCATTCGCCACATTCGTCTTTCGCATTCTTCACCCGCTAACCAGACGATTGGGCATCGCGAGTTTTAGCATTATCTCCCGATTGTCTCTTGAAGATCCAGTTTTGCAGTTATGGTGAGCGTTTTCCCTTCTTCAACCTCATTCCATTCAATTACGCTTCTTCACTGTTGAATGTCATTTCTCTCGTGTTTTCAATTCGCATAGCTTAGTTGTGAAACTTTTGATGGAATGCGAAATCCCTTCGGGTTTCCTTATTCTTCTGACATGAATTTCTGTTGTGAATTTTATTCGCGTGGTCGTCAAATGATTCTGTTCAGCTTTAGTTGTTGAATCGTCTTGTAACCTTTTGCTCACTTTGAACAATGCCCATTAGATCACCTAGGTTTTAGATACTAAAGGTTGGTTTGGGGTTCGGTTGTTAGTGACTTTCTTGTGGGGCTCATGTTTTCAACTTTTGAATCGATGGATGGTTCAAAGCTTCGTCTCCTCGTTAATGTGATAATGTGTTAAGATTTCAATCTCTCTGGGATTTTTTAAAAAGCTGCGGTTGTTGATTTGGTCGATGTCTGCATGCCATGTAGTATGGTGTGGTTTTGCAATTGAGAGATCGAATCTTCTCGATAGTGTGTGGATCCTTGTGTCTTCTCGATAGTATTTGCTTGTGGATCCTCCCTTTTTCATATGATTGTCTTTTCCTTTTGTCAAATCCCTTATTTTTCTCATGGGAGGATGAGCACACTTGACCATATCCAAATATTGTCTTCTGCCCTTCTAGGCCCTTATGGTGCAACGTGAATCATGTTCTAAGGGGGGTTCTTAGTTTCCTGAGTCAATTTGGGACATATTTTTGGAGGCTTTGGTGTCCAAGTGACCCGTATCAGTTCGGATAAGGCTGTGACGTAGTAGGTCTGATTCCACCCGTTTCGAGATAGAGGGATGTTTCTTTAGCATGTTGCTTTCTTTGTGGTCTTATGGAATATCTAGCTTGAAAGAAATAGAATGATACTTGGGTATGGAGAGTTCTAGGGGGGAAATTTGGGCCTTGGCTAGGTTTGCCTCCTTCTAGGTCTTGGCTACTAAGGATTTTTGCGATTACCCTTTATCCATCATCCTTTTGAGCTATAGCCCCTTTTCGTAATTTTGTATATTGTTAACTTTTTTGTTTTTGGGTCTTTTTGTATTGCCCTTGTATATTCTCTTAGTTGTGGCTGATTGCTTTTGGGAGGGTAAAGATCATTTGACCATGTCCAGGGACCAAAACATCAGTTTTCTAGGTTATTTTGATCACTGTTTTATGTATAGATTGCTACTGATTTCTATTCCCATATAATTTTAACATACTCGAATCAGACTGTTAAATGTAATTGTCAATACTGAAGATGTTTGATGCTTGATCTTAATTCTTTTTCAAGATTGTCACCCACCACCTCCGATGGTTCTTATTTGTTTGACTTATTATTGTTCATATTATTTGACTGGTTTTTTTTTGTACCATTGTGTGACAGTGTGAAATACACGTCTTACTCTTTTTGTCCTGCAGGATGGGCATGACTCTGAAGATCCGAAGCAAAGCACGGCTGATATGACGGTTTTTGTGAGTTCATTTTCTTTTCTTTTAGTTCATTCTCTCTGTTTATCCCCATTTGATTGTCAAGCCTACGTCATTTAAAAGGTTGGTGTTATAAGGTTTGTCATTTCCCTTTGACGTATACTCTTGTTCTGTCTAAAATTTGATTCATAAGGCATTCTTGATTGTTTCTTGCTGGTTTATAGATTGGTATTCACTGGCCCCTTTTTTTTTTGCAGGTGCAAAATCTTCTTCAACAGATGGTGAGTCTCAGTTAAGTGTAAGTCTCTGGCAGAGAAGTTTATGTCTAACAAAATCCTTTTTATGCAGCAATCTAGGTTCCAAACCATGTCTGACTCCATTATCACAAAGAATATCCTTTCTAAATAATTCTATTTATTTCTAGCATTTCTCTAAAGTCGTAATTATGATGATTAATTGTTTCCGATACGCTTGGATACATGTTGATTTTTGAGTTTTGCGAAATAACTCGTATATTTATTTATTCGTTTAATAGGCTAGATGGTGCCATTTCTGAGCATTATCATTTTCTTTCACTCTATCAAACAATGATCTGGTGAACGTTGTATCAGAATTCGTTTGACTTTCTAGTACAGCTTTTGGAAAAGAAGTAGATTGTAGGATAGCATAGCTTTCTTGTAATAACTTATAGTAAATAAGCTTTCCTTAACTTGAGTATACTCGATGAGATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAACGATCTAAAATCTGAGATGGGTGTTGAGGGCTCACCGTCGCCGATGACTCCTTCAAAGTCGAGTGCAGATGAAGTGAAGAAAGATGAAGGTTCTGCCTTGAAATAGTTGAGAGTGTATGCTTTATTGTTGAGTTTGATAACTTGCAATATTCTCTTTTTGCTATTGCCTTTGTGAAATTGAAGCCAATGCTTAGGATGAAACAGAAAAGTGCAATATGTTCTAGACTTGTACTTGCTATTTCTGCATGATTTCTTATTGATAATATAGTGATGATTATACTCT AATGGCAAAATGGTAACTTCGTAGAAAGTGGGGGCGAAATGAGCATCACTTAAGCAAGCAAGACAGCCATTCGCCACATTCGTCTTTCGCATTCTTCACCCGCTAACCAGACGATTGGGCATCGCGAGTTTTAGCATTATCTCCCGATTGTCTCTTGAAGATCCAGTTTTGCAGTTATGGATGGGCATGACTCTGAAGATCCGAAGCAAAGCACGGCTGATATGACGGTTTTTGCATTCTTGATTGTTTCTTGCTGGTTTATAGATTGTATACTCGATGAGATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAACGATCTAAAATCTGAGATGGGTGTTGAGGGCTCACCGTCGCCGATGACTCCTTCAAAGTCGAGTGCAGATGAAGTGAAGAAAGATGAAGGTTCTGCCTTGAAATAGTTGAGAGTGTATGCTTTATTGTTGAGTTTGATAACTTGCAATATTCTCTTTTTGCTATTGCCTTTGTGAAATTGAAGCCAATGCTTAGGATGAAACAGAAAAGTGCAATATGTTCTAGACTTGTACTTGCTATTTCTGCATGATTTCTTATTGATAATATAGTGATGATTATACTCT ATGGATGGGCATGACTCTGAAGATCCGAAGCAAAGCACGGCTGATATGACGGTTTTTGCATTCTTGATTGTTTCTTGCTGGTTTATAGATTGTATACTCGATGAGATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAACGATCTAAAATCTGAGATGGGTGTTGAGGGCTCACCGTCGCCGATGACTCCTTCAAAGTCGAGTGCAGATGAAGTGAAGAAAGATGAAGGTTCTGCCTTGAAATAG MDGHDSEDPKQSTADMTVFAFLIVSCWFIDCILDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEGSALK
BLAST of Carg07185 vs. NCBI nr
Match: KHG15379.1 (Hsbp1l1 [Gossypium arboreum]) HSP 1 Score: 102.1 bits (253), Expect = 9.5e-19 Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Carg07185 vs. NCBI nr
Match: KHG15380.1 (Hsbp1 [Gossypium arboreum]) HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18 Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of Carg07185 vs. NCBI nr
Match: XP_016709981.1 (PREDICTED: heat shock factor-binding protein 1-like [Gossypium hirsutum]) HSP 1 Score: 99.0 bits (245), Expect = 8.0e-18 Identity = 54/89 (60.67%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of Carg07185 vs. NCBI nr
Match: XP_017628155.1 (PREDICTED: heat shock factor-binding protein 1-like protein 1 isoform X1 [Gossypium arboreum]) HSP 1 Score: 99.0 bits (245), Expect = 8.0e-18 Identity = 57/94 (60.64%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of Carg07185 vs. NCBI nr
Match: KDP28134.1 (hypothetical protein JCGZ_13905 [Jatropha curcas]) HSP 1 Score: 96.3 bits (238), Expect = 5.2e-17 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of Carg07185 vs. TAIR10
Match: AT4G15802.1 (heat shock factor binding protein) HSP 1 Score: 76.3 bits (186), Expect = 1.0e-14 Identity = 47/89 (52.81%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Carg07185 vs. Swiss-Prot
Match: sp|Q8GW48|HSBP_ARATH (Heat shock factor-binding protein OS=Arabidopsis thaliana OX=3702 GN=HSBP PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.8e-13 Identity = 47/89 (52.81%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of Carg07185 vs. TrEMBL
Match: tr|A0A0B0NU96|A0A0B0NU96_GOSAR (Hsbp1l1 OS=Gossypium arboreum OX=29729 GN=F383_17180 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 6.3e-19 Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of Carg07185 vs. TrEMBL
Match: tr|A0A0B0NRD0|A0A0B0NRD0_GOSAR (Hsbp1 OS=Gossypium arboreum OX=29729 GN=F383_17180 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.1e-18 Identity = 55/91 (60.44%), Postives = 65/91 (71.43%), Query Frame = 0
BLAST of Carg07185 vs. TrEMBL
Match: tr|A0A1U8L5U4|A0A1U8L5U4_GOSHI (heat shock factor-binding protein 1-like OS=Gossypium hirsutum OX=3635 GN=LOC107924177 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.3e-18 Identity = 54/89 (60.67%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of Carg07185 vs. TrEMBL
Match: tr|A0A067K8K4|A0A067K8K4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13905 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.4e-17 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 0
BLAST of Carg07185 vs. TrEMBL
Match: tr|A0A0B0P429|A0A0B0P429_GOSAR (Heat shock factor-binding 1 OS=Gossypium arboreum OX=29729 GN=F383_25423 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.5e-17 Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |