Cp4.1LG12g05610 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GATGGGCATGACTCTGAAGATCCGAAGCAAAGCACGGCTGATATGACGGTTTTTGTGAGTTCATTTTCTTTTCTCTTAGTTCATTCTCTCTGTTTATCCCCATTTGATAGTCAAGCCTACGTTATTTAAAAGGTTGGTGTTATAAAGTTTGTCATTTCCCTTTGACGTATACTCTTGTTCTGTCTAAAATTTGATTCCTAAGGCATTCTTGATTGTTTGTTGCTGGTTTATCGTTAAATTGGTATTTACTCCTCTTCTTTTTTCCAGGTGCAAAATCTTCTTCAACAAATGGTGAGTTTCAGTTAAGTGTAAGTCTCTGGCAGAGAAGTTTATGTCTAACAAAATCTTTTTTATGCAGCAATCTAGGTTCCAAACCATGTCTGACTCCATTATCACAAAGAATATCCTTTCTAAATAATTCTATTTATTTTTAGCATTTCTCTAAAGTCGTAGTTATGATGATTAATTGTTTCCGATACGCTTGGATACATGTTGATTTTTGAGTTTTGCGAAATAACTCGTATATTTATTTATTCGTTTAATAGGCTAGATGGTGCAATTTCTGAGCATTATCATTTTCTTTCACTCTATCAAACAATGATGTGGTGAACGTTATATCAGAATTCGTTTGACTTTAGGTTTTGGAAAAGAAGTAGATTGTAGGATAGCATAGCTTTATTGTAATAACTTATAGTAAATAAGCTTTCCTTAACTTGAGTATACTCGATGAGATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAACGATCTAAAATCTGAGATGGGTGTTGAGGGCTCACCGTCGCCGATGACTCCTTCAAAGTCGAGTGCAGATGAAGTGAAGAAAGATGAAGGTTCTGCCTTGAAATAGTTGAGAGTGTATGCTTTATTGTTGAGTTTGATAACTTGCAATATTCTCTTTTTGCTATTGCCTTTGTGAAATTGAAGCCAATGCTTAGGATGAAACAGAAAAGTGCAATATGTTCTAGACTTGTACTTGCTATTTCTGCATGATTTCTTATTGATAATATAGTGATGATTATACTCTATGATGACCTCATACAACAACTACTGCTCATCTCTGGTAACAAAGTAAACACACAACTCGTTAGCTTCGGCAACGAGCAATAGCACTGCAGCCACGGTCGTAGGGGTTAGCCTCAGCACCTGGCTGGCAATTGTAGTAAGATGCTCCTCTGCGTGAGCATGGCACCTTGTTGGCCCTGAGCGCATCGTAGCTTATGTAGTTTACATCGGCCAATATGCGTCTATTGATTTCGGAGTCCATCTGAAATTCAATGTCATCCATCATGCAGTCTGCCATGGAGCCATGACAGGTAGCTAGAGCTCGATCGAGGACCCAACTCGGGCCTTTTGTGGTGGTGGCCAATACTGCAGTGGAGAAGACGATCAGGAATGCAGCGATGAAGCAAAATGGAAGGAGAACAGAAAGCTTGGCCACCATTCTTGCTTTATCTGCTATTCCTGGTATGTCTGTACAACCCCCTTGAATCCTTTATATTGATTTGCAAGCAAGTTGGTTGGAATTGGTCTTCTGATTTTTGTTTATTATTTATATTTGTTTTGTTTTGATCTTTGAAAATTGTCTCATTAATTTGGCTCTGTCCATGAAATGAAATGAGTTGAAAAATAGATTTATTTACACTCTTTATTTTCAAGCATAGACTTATTATGGGTGGAGTAGAGAATAATCTTTATTTTCAGTTTTTATTATTATATTAAAAGTCTAAAGACAGGCTGGAAGCTTTGATTTAA GATGGGCATGACTCTGAAGATCCGAAGCAAAGCACGGCTGATATGACGGTGCAAAATCTTCTTCAACAAATGCAATCTAGGTTCCAAACCATTATACTCGATGAGATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAACGATCTAAAATCTGAGATGGGTGTTGAGGGCTCACCGTCGCCGATGACTCCTTCAAAGTCGAGTGCAGATGAAGTGAAGAAAGATGAAGTGATGATTATACTCTATGATGACCTCATACAACAACTACTGCTCATCTCTGGTAACAAAGTAGCTAGAGCTCGATCGAGGACCCAACTCGGGCCTTTTGTGGTGGTGGCCAATACTGCAGTGGAGAAGACGATCAGGAATGCAGCGATGAAGCAAAATGGAAGGAGAACAGAAAGCTTGGCCACCATTCTTGCTTTATCTGCTATTCCTGACAGGCTGGAAGCTTTGATTTAA GATGGGCATGACTCTGAAGATCCGAAGCAAAGCACGGCTGATATGACGGTGCAAAATCTTCTTCAACAAATGCAATCTAGGTTCCAAACCATTATACTCGATGAGATGGGGAGCCGCATAAATGAATTGGAGCAGAGCATCAACGATCTAAAATCTGAGATGGGTGTTGAGGGCTCACCGTCGCCGATGACTCCTTCAAAGTCGAGTGCAGATGAAGTGAAGAAAGATGAAGTGATGATTATACTCTATGATGACCTCATACAACAACTACTGCTCATCTCTGGTAACAAAGTAGCTAGAGCTCGATCGAGGACCCAACTCGGGCCTTTTGTGGTGGTGGCCAATACTGCAGTGGAGAAGACGATCAGGAATGCAGCGATGAAGCAAAATGGAAGGAGAACAGAAAGCTTGGCCACCATTCTTGCTTTATCTGCTATTCCTGACAGGCTGGAAGCTTTGATTTAA DGHDSEDPKQSTADMTVQNLLQQMQSRFQTIILDEMGSRINELEQSINDLKSEMGVEGSPSPMTPSKSSADEVKKDEVMIILYDDLIQQLLLISGNKVARARSRTQLGPFVVVANTAVEKTIRNAAMKQNGRRTESLATILALSAIPDRLEALI
BLAST of Cp4.1LG12g05610 vs. TrEMBL
Match: A0A067H5L4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034185mg PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22 Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. TrEMBL
Match: A0A067H629_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034185mg PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22 Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. TrEMBL
Match: V4TVF9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023083mg PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22 Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. TrEMBL
Match: A0A061DSF3_THECC (Heat shock factor binding protein OS=Theobroma cacao GN=TCM_046983 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.1e-22 Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. TrEMBL
Match: A0A0D2SCE9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G128900 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 2.0e-20 Identity = 59/85 (69.41%), Postives = 68/85 (80.00%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. TAIR10
Match: AT4G15802.1 (AT4G15802.1 heat shock factor binding protein) HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19 Identity = 55/82 (67.07%), Postives = 63/82 (76.83%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. NCBI nr
Match: gi|659101430|ref|XP_008451602.1| (PREDICTED: heat shock factor-binding protein 1 [Cucumis melo]) HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24 Identity = 69/85 (81.18%), Postives = 73/85 (85.88%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. NCBI nr
Match: gi|449436519|ref|XP_004136040.1| (PREDICTED: heat shock factor-binding protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 4.2e-24 Identity = 68/85 (80.00%), Postives = 72/85 (84.71%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. NCBI nr
Match: gi|657988926|ref|XP_008386647.1| (PREDICTED: heat shock factor-binding protein 1-like [Malus domestica]) HSP 1 Score: 114.8 bits (286), Expect = 1.4e-22 Identity = 65/85 (76.47%), Postives = 71/85 (83.53%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. NCBI nr
Match: gi|657955052|ref|XP_008368986.1| (PREDICTED: heat shock factor-binding protein 1-like [Malus domestica]) HSP 1 Score: 114.8 bits (286), Expect = 1.4e-22 Identity = 64/85 (75.29%), Postives = 72/85 (84.71%), Query Frame = 1
BLAST of Cp4.1LG12g05610 vs. NCBI nr
Match: gi|641868615|gb|KDO87299.1| (hypothetical protein CISIN_1g034185mg [Citrus sinensis]) HSP 1 Score: 114.4 bits (285), Expect = 1.8e-22 Identity = 63/85 (74.12%), Postives = 73/85 (85.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |