Cp4.1LG17g07150 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG17g07150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHeat shock factor-binding 1
LocationCp4.1LG17 : 6227052 .. 6234520 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATGGATAAAAAGCCAATGCCGTCTGGTTCTCGAATCAGGGCCGTGTACGTCAACGGGATCGCGGGATCGCAGGTGACTGAGGTTAGCTCTCGCCGGTGAAAGTCGGCGAAACCTCCGAGAAGTTCAGCTGTTTCCGACACAAGTATCGTGGAAATCAAAGGCTCGCATTTGCTTTCGTTTTGTGTTGGCTGATGCCATCCTCGTCGCCAATATCATCGCATATGTACCCTGTAAGATCGAATTCTTATTCGTCTCTTTTCTTTAAAATGAATCATCGATATGTCCTTTTGGCGCCATTGCTGGTTTGGTTCCAGATACTGAAATTGATTGGGACGTTTACATGTCAAAAGTAAGTATCATTAGTAGTAGATATTTTGATTTTGGCTGCTAAATTACATCCGCCGTGACTCCGATCCTCAGATAAAGCAGCAAAAATGATAGAATTACTGATTAAGACTAGAGTTTATACGGCTTAGCATTTTGATCTCAAGTAAAGCATTTCTTTGGAGACTCATGGTCATTTGTTTGATTTTGTCCTTGGTTTCAAATTGGCCTTGGCTCTCTACGAACTACAACATTAAACTGGAAAAAAATTGATAAAATTAACGATTAAGACTAGAGTGTCCAAGAATCATAACAATAAGTTGCTTAGAAATTAGATCTTTTGAGTAAAGCATTTTTTTGGACTAATGGTTGTTTGTTTGATCTTCTACTATTGGTTTCCATGGCTGTTTGATTCATCTCGTACTGTTGGTTTCAATGTTCAAGAATTATAACATTAAACACCTCTTTCTCTATAGGAGGGTTTAATGGGTTCTACTTATTGGTATTATTTTCAAGCAGGTAAGTGGATTTTTGGGAGGGGAGAGGGATTACAGCAAATTGCAAGGAGACACTGGACCTCTAGTTTATCCTGCTCGGTTTTTGTAATAGCCCAAGCCCACTGTTAGCCGATATTGTCCTCTTTGCCAAGCCCACTGCTAGTAGATATTGTCCTCTTTGTGCTTTCCCTTTTGAACTTCCTCTCAAGGTTTTTAAAATGCGTTTGGTAGGGAGAGGTTTCCACACCTTTATAAGCAATGCTTTTTTCTCCTCTCCAACCAATGTGGAATCTCACAATCCACCCCTTGGGGGCTCAACGTCCTCGCTGGCACACCGCCCGGTGTCTGGCTCTGATACCATTTACAATGGCCCAAACCCACCGCTAACAAATATTGTTCTCTTTGGGCTTTCCCTTTCGAGTTTTCCCTCAAGGTTTTTAAAACGCGTCTGGTAGGGAGAGGTTTACACACCCTTATAAGCAATGCTTCTTTCTCCTCTCCAACTAATATTGTCCTCTTTGTGATTTCCCTTTTGAGTTTTCCCTCAAGGTTTTTAAAATGCGTCTGGTTGGGAGAGGTTTCCACACCTTTATAAGCAATACTTCTTTCTCCTCGAACTGACGTGGGATCTCACAGTTTTTGTACATTTATTTTGCCATACAATTCCTCACTGGAGAAGAGGTCTATCGAGCGCAGGTAATATTTCATCATATTTTAAGCCAACCTAACCATAGTTTAACTCGTTGAAGCATACATCTTCGATCAAAATGTTAGAAGTTCCCACCTCTACACGCATTGAGCTCTAAAACTATTAGAAAACTGTTTGAAGTTGTTTTCTTAAACAAGTTGTTACACATTTCCTTTGCTGGTGAGATTGAGGGGTGGGGGAACTACATTATCTGATAAAATTTTTAGGTGCTTCACTTTGCTCTTGTATCTACACTTGAGCTATTTGGATTCAGGCAATGTTGTTTAATAAGCTTCCATTATTGCAGGCAACTTTCCCAATGGGATATCTAACAATAACAAGCCATTGGTCAAGTTACTTGAGGGCGAACGTAAGTCGGTACTAAAAGTACATTCGATCTAACTTGTAATATGATGATCTGTTTAATATTTTCTTCGTCGTCTAACCCCCTCTCTCGTTTTTCTGGTTGATCGTTCTCCGACCATTTCATCGGCTCAGATGTTGTAACAACAATGTTCGTTGGGAATTTCATCGGCGTTATGTGTGCTCGATCATTGCATTATCAGTTCTACTCATGGTAAGCTCAATTATCTCAAGTTTCATATTTTTATGAACACACACACCATTCAATCCTCAAGCAACAGTGTCTGAAATTTGGTCTATATAGAATCTGGTCATATAACTCATTCGATCTGAAAGCAATGAAGTATGGGCTCTAAATGTCGTATTTCGTTACGCTGCAGGTATTTCTTTTCTATTCCATATCTGTTGTGGAGAACGTCGTTTCCTACTTTATTACGGTACCTTGCTGAAAAACTTCGCCTTCTTGTCTGGATTATTTTGTGTACATTCAATATATAGATATGGATGTTTAAGCCCACCGCTAGCAGATATTGTCCTCTTTTGGGTTTTCCCTTTCGGGCTTCCTCTCAAAGTTTTTAAAACGTGTTTGTTAGAGAGAGGTTTCCACACTCTTATAAAGAATACTTCGTTCTCCTCCCCAACCGACGTGGGATCTCATCTGTTTGGGGGGATCCGGTTTTGTTGGAATGTATATCCTTCTAATATGTACTCCTCCATGTTGCTTTCTAAGTCTTCACCTAATTTTGCTTTGGGGTTTGTGGTCTGGGAGCAGCAGAGTATCCTTATGTTCAAGTGAAGTATCTGATATAAAACAAAACTGAAAAACACCAACTCTTAGTCTGTCTCACTATCATTAGTTTGAATCTAATTGCATAGAGTTTGTATTCTCCATGTTTGATTTTCAGCTGGCTTTCTTGTAATACTTTTCATTTTTTCCGTCTTCCTTGAGCGGACGGAGGGGTTTCAGATAGTATTGTATCGAAATGTGATCGGGTCAACTTTAGGTTGTCGAGCATCGAATTTGAGGCTCGTTTATTTCGAGTCGTTCTCCTCTGTTATTGTCATCTTGAAACTCACCTTTGAAAATTGCTATGTTTACTCGTATTTTGTAGATTCATTCAATTATCAATTCTAGTGTTGAAATGAAAGAACGATTTAGATTGTCAAGACAAAGAGAAGAGAAGAGAAGCGAGTTCATGACCTGTAAGCCTTCTACCTCCACACGGTATTGCTCGAGAAGATTTTCAAACTTCGACAGATTTTTTATAGCAAACCCGAGAAGAGTTTCTAAGTTTTGAATGTCATACCTCCAAAACTTTGGATAATCTTTTAATGTCTAAAATGCCTGTTTTTTTTTCGTAAAAATAATGTTAAATTATAAATTTAGTTCCTTCGTTGTATTACCCGGTCACAAAGCTAGTTTCTTGGTTACATTTTTTACCGATCAAATACAAATAATAAAGTATTTTACCACAAAAAAAGAAAAATTATTGTTTTTTTTTTGTTTTAATAATGATTAAAAAAATAACAAAATTAATAAATAATTACTTAATGAGTTATATTTAAAAATAAGAAACATAGCGGATGTTTTAAGTTATACTTAAATTGACTTTCATATATTTAATCAATTAATAAAAATATATATTCTTTTATAAATTGTGTACAATTATACATTTTTAGACTTCAAATTTTAAATCAAAATATTTCGAAAACTTTTTATAAATTTCTACTATTTAGATCATATTTTTTTTAATTAAATAAAAAATATTTATATTTAAGTTATGAACTTTTGACAATAAATTAATTAAATAAATATATGAAATTACAAAATTTATATTTAAGCTACAGAACGTTGTTCGACCACTAACGGTAAGAATAAAATTACAAAATTTAAAATAATAAATATATTTTTATAAAAAATGNNNNNNNNGGGGGGGGGGGGGGAGAAGTGGGTATCACCTGAGCAAAAAAAGGGAGCCATTCGCTATATTCTACGTCCCGCGTTCTTCCCCCGCGAACTGGACGATTGGGCACCGCGAGTTTCAGCATCTCCCGATTGTCTCTTGAAGATCCACTCTTGCGGAAATGGTTGGTGTCTCTTCTTTTTAAATCTCATTCCGTTCAGTCACTGTTCTTCCCCGTTGAATGTCATTGCTGTTGTGTATCCATTTCACCCTGTTAGATGTGAAATTTTGGAAGGAATTCGAAATCTCTAAGGATTTCCTTGTTTCTGTTTGTAATCTGTTCTAAATCGAATGATTCTGTTCAGCTTTAGTTCCGCAATCGTCTTGCTCACTTTTTAATCACTTTTGAACAATGCCGATTTAGATCACCTTAGGTTGTTGATATTGAACGTTGATTTGGGGTTGGGTTACGGATGAGTTTCTTGTGGATTTCGTGTTTCTGCTAGGATTCATCGTTTTAATCGATGACTGAAGGCTTCGTCACGAGATAATGTGTGAGGATTCAATCTTTCTTGGATTTTTGTAAAGCTACGCTTGCTGATTTGGTTGATTCTGGATACCATGGGATATGGTGTAGTTTTTTTTTTCGCTGAGGGGCTGGAATGAAGCTCATATTGTTTATGAGGAGACTGAACATTATTCGGCTTCGTATGAAGGAAGGGATTATCTTTAAGATTGGTTTTGCAAACTCTTAGGATCATGCTGATTGGATATTTTTTGGGAAAGTTTTGTGGAAAGGAGGTTTTTGGGTTTAAATTGAAATGTTGGATGTGGTCAATTCTCTCTTGTTGATGCACTTAATGGGAAGGCAACGAGTAAAACATTTGCCACTAGGGGTTTCAATGTCATCGTTCCTTTTCCTTGTGGAGGTTTCTTAGTAAGTTAGTGTTTAGAGGGGTGGACAGGGACTTTGTTGAAGATTTCCATGTGAGAATGAATAAAGTTCTGCTCATACACTTTTAGTCCGTAGATGATACCATCTTTTCCTACTACGAGAGGGAAGAGTCTTTTGCTAATGTTTTGCAACAGCTCGCATATGACTATGATGGAGGTCTTATACAACCCTTCCTTACAACATAGAGAGATGGCACTTTGGAATGTTGCTTTCATTGCAATCTTATGGAAGGTGCACTTGGAGATGTGAATAGCACTTCTGAGGAAGTTTGGGCCCTGGCTAAGTTCAATCCCTTCTTTTTCTAGTGGCTAAGACGCTGGCTCACAGTTAGTTTATTCGTTGTTATCTCAGGAGTGCGAATGACTTCTGTTCCCATATTATGATAGTCGAATCTTATTGTAGTTGATTATAGTTGTCACAACTGAAGATGTTTGAATGCTTTATCTTAATTCATTTTCAAGATTGTCACCCTCTAGTTATTATTGGGATAGAACCTAAATATATCGAAATATGGAAGATAACAAAACTACATAATAACTCTCCAATTATTGAGGTGCTTGGAACCTTTCCCCTTCCTTGAGATACCACTCAGATCTAAGCCACGATGATGCGCTCCTTGTTGAGGATTATTGGGTGTGAGTCCCACATTGGTTAATTTAGTGGAAGATCATGGGTTTATAAGTGAGGAATACTATCTCCATTGGTATGAGGCCTTTTTGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTAGACAATATCATACCATTGTGGAGAGTTGTGATTTCTAACACTCCTAGCTCACGGAGCTACATACCATAAAACGAAAAAGAATCTCTCGCGAGCAACCATCTAGTTTCATTCTTTACCCTACCTTCCCCTTTGTATCCATTGATCGCTATCCATTTTCCTTGCATCCATCTTTGGAGCAGAGCTATATCGAAATTTTTTTAAAATTGATTTCAGTCTTGTATGTTCTCACGCTCTCTGTTCCCAAGCAACTTCAAGGAAACCAATGGAGGCATAGGAGAGATGGAATAACGTCTAACCTATGACAAGCCGCTTAGGATTAGTTTGCAAATTTGTGATACTGTAGTCGAATCATTACCAATGATGTGCTATATGCCTAAGTGTGAAAAGAATGTGTTGAAACCTAAATGTGGGGATTAGAGCACTTTTTCTCTATAACATCTTCTCTAGTGAATTACCCAACATGCCTTAATGTTAACCTCGTAGCACCTAGTGGTCAGTAAGGGCCATGGAATGTTAAAAGGTTTAGAAGAAATGGATTCAAATGATGGTAGTCACCTACTTGAGATTTAATATTCTACGAGTTCCTCGACAATCAAATGTAATAAGACTCTAGTCTTGTGAGATTGTGAGATTAGTTAAGCTGCGCACAAGTTGGTCCAAAACTCACAAATATTTAAAAAATCACCGCAATTACTTCTCTAATCAATTATCAATATCTAACTACCATTCCTAATGGTATTCCTATCATATTGTTCATATTATTTGACTGGTTTGTTGTTGTTTGTACCATTGCGTGACAGTGTGAAATGCACATTTTACTCTTTTTATCTTGTAGGATGGACACGACTCTGAAGATGCAAAACAAAGCACAGCTGATATGACTGTTTTTGTGAGTTCATGTCTTTTCTTTCAGTTTATTCTCTGTGTTTTTCACATTTCATAGTCTAATCCAACTTTTTTTGTAAGAATGGTTTTATAAAGTTTATCATCAGTACTCTCCTTCTGTTTAACATTCAATCCCTAAGCCACTCTTGATTGTTTCTTGGTAGTTCATAGTTAAATTGGTATTAACTCTTCTTCTTCTTTCCAGGTGCAAAATCTTCTTCAACAGATGGTGAGTTTCAGTTCGTGTAAATTTCCAGCAGAGAAATTCATATCTAACATAATCTTATTTATGCAGCAATCAAGGTTCCAAACCATGTCTGACTCCATTATCACAAAGAATATCCTTTTGAAATGCTGCTAGAAGTTTCTTAAGTTATAATTATAACGAGTAATTGTTTCTGATAGGCTCGAATACAATTCGAGTTTCGCAAAATAAATTCTATAGTTATTTATCTGGTAAAAGAGGCCATACAGTTCAAACGGTGCAATTTCCCGAGTATTACGTTTTCCATTCTAGCTAACAATGATCTTGTAAAAGTTACATATAGTTAAAGCATTCTAATAGGAAGATAATGGTAATGATTTCGAACTGGATTGAGTTCGTATGAACCTTAATTCCTTCTAATGAGACGTTCGAGTCCAGTACAATCTAAGAACCTTTATATAAGTGATTAGCCACCTTGATTGTAGGTTAGAATTTGTTTGAATCTGTATGAACCTTAATTCCTTCTAATTGATAGTATATATGCTTTCCTTAACTTGAAAATACTTGATGAGATGGGAAGCCGCATAAATGAATTGGAGCAGAGCATCAACGACCTAAAAGCTGAGATGGGCGTGGAGGGTTCGCCGTTGCCTCCGTCCAAGACGAATGCCGATGAATCGAAGAAAGACGAAGGTTCTGCGTAGACATAGTTGAGAGTGTATGTTTTATTTATGAGTTTGTTGTCTTTTCGCTATTGCCTTTGTGAAACTGAAGTCAATGCTTAGGATGAGACAGAAAAATACAATATGTTCTAGACATGGACCTGCTATTTCAGCATAATTTCTTATTGGCAATATAGTGATGATTATACTTTATGATTATTTCAT

mRNA sequence

TAATGGATAAAAAGCCAATGCCGTCTGGTTCTCGAATCAGGGCCGTGTACGTCAACGGGATCGCGGGATCGCAGGTGACTGAGGTTAGCTCTCGCCGGTGAAAGTCGGCGAAACCTCCGAGAAGTTCAGCTGTTTCCGACACAAGTATCGTGGAAATCAAAGGCTCGCATTTGCTTTCGTTTTGTGTTGGCTGATGCCATCCTCGTCGCCAATATCATCGCATATGTACCCTGCAACTTTCCCAATGGGATATCTAACAATAACAAGCCATTGGTCAAGTTACTTGAGGGCGAACATTCATTCAATTATCAATTCTAGTGTTGAAATGAAAGAACGATTTAGATTGTCAAGACAAAGAGAAGAGAAGAGAAGCGAGTTCATGACCTGTAAGCCTTCTACCTCCACACGGTATTGCTCGAGAAGATTTTCAAACTTCGACAGATTTTTTATAGCAAACCCGAGAAGAAACGTTGTTCGACCACTAACGGATGGACACGACTCTGAAGATGCAAAACAAAGCACAGCTGATATGACTGTGCAAAATCTTCTTCAACAGATGAGCATCAACGACCTAAAAGCTGAGATGGGCGTGGAGGGTTCGCCGTTGCCTCCGTCCAAGACGAATGCCGATGAATCGAAGAAAGACGAAGGTTCTGCGTAGACATAGTTGAGAGTGTATGTTTTATTTATGAGTTTGTTGTCTTTTCGCTATTGCCTTTGTGAAACTGAAGTCAATGCTTAGGATGAGACAGAAAAATACAATATGTTCTAGACATGGACCTGCTATTTCAGCATAATTTCTTATTGGCAATATAGTGATGATTATACTTTATGATTATTTCAT

Coding sequence (CDS)

ATGCCATCCTCGTCGCCAATATCATCGCATATGTACCCTGCAACTTTCCCAATGGGATATCTAACAATAACAAGCCATTGGTCAAGTTACTTGAGGGCGAACATTCATTCAATTATCAATTCTAGTGTTGAAATGAAAGAACGATTTAGATTGTCAAGACAAAGAGAAGAGAAGAGAAGCGAGTTCATGACCTGTAAGCCTTCTACCTCCACACGGTATTGCTCGAGAAGATTTTCAAACTTCGACAGATTTTTTATAGCAAACCCGAGAAGAAACGTTGTTCGACCACTAACGGATGGACACGACTCTGAAGATGCAAAACAAAGCACAGCTGATATGACTGTGCAAAATCTTCTTCAACAGATGAGCATCAACGACCTAAAAGCTGAGATGGGCGTGGAGGGTTCGCCGTTGCCTCCGTCCAAGACGAATGCCGATGAATCGAAGAAAGACGAAGGTTCTGCGTAG

Protein sequence

MPSSSPISSHMYPATFPMGYLTITSHWSSYLRANIHSIINSSVEMKERFRLSRQREEKRSEFMTCKPSTSTRYCSRRFSNFDRFFIANPRRNVVRPLTDGHDSEDAKQSTADMTVQNLLQQMSINDLKAEMGVEGSPLPPSKTNADESKKDEGSA
Homology
[Close]
BLAST of Cp4.1LG17g07150 vs. TrEMBL
Match: A0A0A0K7R0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396350 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-16
Identity = 54/61 (88.52%), Postives = 54/61 (88.52%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMT--VQNLLQQMSINDLKAEMGVEG--SPLPPSKTNADESKKDEGS 156
           DGHDSEDAKQSTADMT  VQNLLQQMSINDLKAEMGVEG  SPLPPSK  ADE KKDEGS
Sbjct: 2   DGHDSEDAKQSTADMTIFVQNLLQQMSINDLKAEMGVEGSPSPLPPSKPVADEVKKDEGS 61

[Close]
BLAST of Cp4.1LG17g07150 vs. TrEMBL
Match: A0A0B0P429_GOSAR (Heat shock factor-binding 1 OS=Gossypium arboreum GN=F383_25423 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-10
Identity = 47/76 (61.84%), Postives = 53/76 (69.74%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMTV--QNLLQQM---------------SINDLKAEMGVEG--SPLP 156
           DG +S+D+KQSTADMTV  QNLLQQM               SINDLKAEMGVEG  SPL 
Sbjct: 2   DGQNSDDSKQSTADMTVFVQNLLQQMVTLDDMGNRINELEQSINDLKAEMGVEGTSSPLD 61

[Close]
BLAST of Cp4.1LG17g07150 vs. TrEMBL
Match: V4TVF9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023083mg PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.1e-10
Identity = 49/88 (55.68%), Postives = 52/88 (59.09%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMT--VQNLLQQM---------------------------SINDLKA 156
           DGHDSED KQSTADMT  VQNLLQQM                           SINDL+A
Sbjct: 2   DGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIVTKIDEMGNRINELEQSINDLRA 61

[Close]
BLAST of Cp4.1LG17g07150 vs. TrEMBL
Match: A0A067H629_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034185mg PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.1e-10
Identity = 49/88 (55.68%), Postives = 52/88 (59.09%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMT--VQNLLQQM---------------------------SINDLKA 156
           DGHDSED KQSTADMT  VQNLLQQM                           SINDL+A
Sbjct: 15  DGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIVTKIDEMGNRINELEQSINDLRA 74

[Close]
BLAST of Cp4.1LG17g07150 vs. TrEMBL
Match: A0A067H5L4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034185mg PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.1e-10
Identity = 49/88 (55.68%), Postives = 52/88 (59.09%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMT--VQNLLQQM---------------------------SINDLKA 156
           DGHDSED KQSTADMT  VQNLLQQM                           SINDL+A
Sbjct: 2   DGHDSEDPKQSTADMTVFVQNLLQQMQSRFQTMSDSIVTKIDEMGNRINELEQSINDLRA 61

[Close]
BLAST of Cp4.1LG17g07150 vs. TAIR10
Match: AT4G15802.1 (AT4G15802.1 heat shock factor binding protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 42/86 (48.84%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMT--VQNLLQQM---------------------------SINDLKA 156
           DGHDSED KQSTADMT  VQNLLQQM                           SINDL+A
Sbjct: 2   DGHDSEDTKQSTADMTAFVQNLLQQMQTRFQTMSDSIITKIDDMGGRINELEQSINDLRA 61

[Close]
BLAST of Cp4.1LG17g07150 vs. NCBI nr
Match: gi|700189686|gb|KGN44919.1| (hypothetical protein Csa_7G396350 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 4.3e-16
Identity = 54/61 (88.52%), Postives = 54/61 (88.52%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMT--VQNLLQQMSINDLKAEMGVEG--SPLPPSKTNADESKKDEGS 156
           DGHDSEDAKQSTADMT  VQNLLQQMSINDLKAEMGVEG  SPLPPSK  ADE KKDEGS
Sbjct: 2   DGHDSEDAKQSTADMTIFVQNLLQQMSINDLKAEMGVEGSPSPLPPSKPVADEVKKDEGS 61

[Close]
BLAST of Cp4.1LG17g07150 vs. NCBI nr
Match: gi|659101430|ref|XP_008451602.1| (PREDICTED: heat shock factor-binding protein 1 [Cucumis melo])

HSP 1 Score: 79.3 bits (194), Expect = 6.4e-12
Identity = 54/88 (61.36%), Postives = 55/88 (62.50%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMT--VQNLLQQM---------------------------SINDLKA 156
           DGHDSEDAKQSTADMT  VQNLLQQM                           SINDLKA
Sbjct: 2   DGHDSEDAKQSTADMTIFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKA 61

[Close]
BLAST of Cp4.1LG17g07150 vs. NCBI nr
Match: gi|449436519|ref|XP_004136040.1| (PREDICTED: heat shock factor-binding protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 1.1e-11
Identity = 54/88 (61.36%), Postives = 54/88 (61.36%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMT--VQNLLQQM---------------------------SINDLKA 156
           DGHDSEDAKQSTADMT  VQNLLQQM                           SINDLKA
Sbjct: 2   DGHDSEDAKQSTADMTIFVQNLLQQMQSRFQTMSDSIITKIDEMGSRINELEQSINDLKA 61

[Close]
BLAST of Cp4.1LG17g07150 vs. NCBI nr
Match: gi|729355906|ref|XP_010545028.1| (PREDICTED: heat shock factor-binding protein 1-like [Tarenaya hassleriana])

HSP 1 Score: 72.4 bits (176), Expect = 7.8e-10
Identity = 47/88 (53.41%), Postives = 55/88 (62.50%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMTV--QNLLQQM---------------------------SINDLKA 156
           DGHDS+D+KQS+ADMTV  QNLLQQM                           SIN+LKA
Sbjct: 2   DGHDSQDSKQSSADMTVFVQNLLQQMQSRFQTMSDTIVTKIDEMGNRVNELEQSINELKA 61

[Close]
BLAST of Cp4.1LG17g07150 vs. NCBI nr
Match: gi|728839431|gb|KHG18874.1| (Heat shock factor-binding 1 [Gossypium arboreum])

HSP 1 Score: 72.4 bits (176), Expect = 7.8e-10
Identity = 47/76 (61.84%), Postives = 53/76 (69.74%), Query Frame = 1 

Query: 99  DGHDSEDAKQSTADMTV--QNLLQQM---------------SINDLKAEMGVEG--SPLP 156
           DG +S+D+KQSTADMTV  QNLLQQM               SINDLKAEMGVEG  SPL 
Sbjct: 2   DGQNSDDSKQSTADMTVFVQNLLQQMVTLDDMGNRINELEQSINDLKAEMGVEGTSSPLD 61

The following BLAST results are available for this feature:
BLAST of Cp4.1LG17g07150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG17g07150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7R0_CUCSA3.0e-1688.52Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396350 PE=4 SV=1[more]
A0A0B0P429_GOSAR5.4e-1061.84Heat shock factor-binding 1 OS=Gossypium arboreum GN=F383_25423 PE=4 SV=1[more]
V4TVF9_9ROSI7.1e-1055.68Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023083mg PE=4 SV=1[more]
A0A067H629_CITSI7.1e-1055.68Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034185mg PE=4 SV=1[more]
A0A067H5L4_CITSI7.1e-1055.68Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034185mg PE=4 SV=1[more]
BLAST of Cp4.1LG17g07150 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15802.11.4e-0948.84 heat shock factor binding protein[more]
BLAST of Cp4.1LG17g07150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189686|gb|KGN44919.1|4.3e-1688.52hypothetical protein Csa_7G396350 [Cucumis sativus][more]
gi|659101430|ref|XP_008451602.1|6.4e-1261.36PREDICTED: heat shock factor-binding protein 1 [Cucumis melo][more]
gi|449436519|ref|XP_004136040.1|1.1e-1161.36PREDICTED: heat shock factor-binding protein 1 isoform X2 [Cucumis sativus][more]
gi|729355906|ref|XP_010545028.1|7.8e-1053.41PREDICTED: heat shock factor-binding protein 1-like [Tarenaya hassleriana][more]
gi|728839431|gb|KHG18874.1|7.8e-1061.84Heat shock factor-binding 1 [Gossypium arboreum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045892 negative regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003714 transcription corepressor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG17g07150.1Cp4.1LG17g07150.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG17g07150CmaCh17G011030Cucurbita maxima (Rimu)cmacpeB376
Cp4.1LG17g07150CmaCh08G004130Cucurbita maxima (Rimu)cmacpeB917
Cp4.1LG17g07150CmoCh17G010780Cucurbita moschata (Rifu)cmocpeB339
Cp4.1LG17g07150CmoCh08G004070Cucurbita moschata (Rifu)cmocpeB853
Cp4.1LG17g07150Csa7G396350Cucumber (Chinese Long) v2cpecuB343
Cp4.1LG17g07150ClCG09G006050Watermelon (Charleston Gray)cpewcgB280
Cp4.1LG17g07150CsaV3_7G029090Cucumber (Chinese Long) v3cpecucB0422
Cp4.1LG17g07150Carg07185Silver-seed gourdcarcpeB0161
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG17g07150Cp4.1LG12g05610Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG17g07150Cucurbita pepo (Zucchini)cpecpeB336
Cp4.1LG17g07150Cucumber (Gy14) v1cgycpeB0189
Cp4.1LG17g07150Cucumber (Gy14) v1cgycpeB0580
Cp4.1LG17g07150Cucurbita moschata (Rifu)cmocpeB232
Cp4.1LG17g07150Wild cucumber (PI 183967)cpecpiB316
Cp4.1LG17g07150Wild cucumber (PI 183967)cpecpiB344
Cp4.1LG17g07150Cucumber (Chinese Long) v2cpecuB315
Cp4.1LG17g07150Bottle gourd (USVL1VR-Ls)cpelsiB262
Cp4.1LG17g07150Watermelon (97103) v1cpewmB311
Cp4.1LG17g07150Melon (DHL92) v3.5.1cpemeB293
Cp4.1LG17g07150Melon (DHL92) v3.5.1cpemeB318
Cp4.1LG17g07150Cucumber (Gy14) v2cgybcpeB931
Cp4.1LG17g07150Melon (DHL92) v3.6.1cpemedB341
Cp4.1LG17g07150Melon (DHL92) v3.6.1cpemedB375
Cp4.1LG17g07150Cucumber (Chinese Long) v3cpecucB0393
Cp4.1LG17g07150Wax gourdcpewgoB0376
Cp4.1LG17g07150Wax gourdcpewgoB0420