CsaV3_5G035650 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTACGGACGGACCATCGGCGTGGGTCCGAAGCTGGAAAAATAGCGTGGGAGAGATTTGCTTAGGGCGGAAGTGGGAAGTCCATACTGCAAAAAAGCTACCGTTTGCGCTTTTTCTTTTCTTTTCATGTCATCATTTGATAATCTCCCCTCCTTCGTTAATAATTGTTTTTTTATTGATGTAAAAAATAATTTAAAACAAAAACAAAAGTTAAAATTACAAGGTGAAGTAAGATATTAGAGGCAAGTTTAATCTCAATTTCGTAGATATTGTTATATGTTTATATATATAGAAAATAGTTTAAATTGTTTATGAATATAACCAAAGTTTAACAACTATATAGATATATACATCTACGAAAATGTGAGCGATAGCGGACAAAGATTCATTAATATATATCAACATGTCATATATTTATAACTATTTTGGTTCGTGTATATAATTAGAGGAGTTTGGTAATATTTTGTTTGTGTTTATGAGGTTTTATCTAAACTTTTATGTTATCTCTTCAAGTTTTAGGTTACGTTTGTCCATACGATTTTAAAAATATTTTGGTGAGGTTTTGTTTGTGTCCCAAAATCACACTATGTATCAAATTGTTTGTTGTTGAGGATTGTATTCCATTCAAATGAAAACACTTTTATCTATTTAATTAAATTGAAAAATAAATTTATATTTTTTATATGGTAAATTTTAATGTTATTAACTTTTTTAACAAAATTTAGTTTGACTAAATTTAAGGTTACCGAAAGTGTGCACAGGCTAAGATCAAACATTTAAACATACTAAAATTATGAACAGATTAAACTCCAAAGAATAATGATCAAGATGGTATTACCTATAACCAATAATACATTTAGTCATTTATTTTGGACCAGGGGTCATCGTCCCATAATATTGTTTATTTAAATTTAACATTTGTGACTTTATTTTTTGAATAGATTAAAATATCTTATCCTAATCAAAATAGTTGTTATTATGACACAAGTTTTTTATTGAATTTATTTTATTGTTCTCAGTTATATCTAGCACAACTCTCAAACGAGTTAGAAGAGGTTAATTACTTTATGATTGAAAACTGCAAAGACAAAAAAAACTATTTTCATATTAATTGATTTAAACACTCCTCCAACAAGTCGCAACTATTTCATTTGATCAATCTTATTTATACGATAAAAGCATGCAATCTTAAACAAAAGAAATACAATTCACTTGATTTATAAAATACCTCAAATGGGGATATTAAGCTCAACTAAAATTATCGGCTTTGATCTAGAGAACTGTAGGGTGTATTGTTATTTTATATGTACATAATATGCATCTTCACGAACTCACCTTGCATTCTCTTATGTTTAGTTTGAATGTTCGCAACCTTAAAAGGGCTTGTACTTCTATTGTGAGATCGAAAATAACAGCTCTCATCGAGATATTTTTTTCTTGAGTTATCTGTACAGGAATTCAATGGAACAAATTAAATATAAATCAAAATGAAATAATATATATATAGAAAAACAGAACTAGCTTTGAAATTGGTCTAATTAAAAATAAAAATAACGCCCGGCGTTCTACAACGCACATTTACTACTAAGTTCCTACCCTCCCCATCTCTTCCCGTCTTGTTTCCATCGCCCGAAAACCATGTGTGCTGCGAACCGCTATAGATTTCGGGAACGTTTCGGACAAAATTGAACCAAAAATCAATACAACAATGTTAGGGTTTCTCACAATCCCACACCAATTGAAGGTTTCCCCATCTTTCGCTTCAATCTCATCACCTTCTTCCCTCTTTCGTCCACTCTACAAATTTCCTATCCATCACACATTTTACAACTCCCAATTTCTAATTTCCAGTGACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACTGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAACGGCTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTTTACTTTAG ATGTGTACGGACGGACCATCGGCGTGGGTCCGAAGCTGGAAAAATAGCGTGGGAGAGATTTGCTTAGGGCGGAAGTGGGAAGTCCATACTGCAAAAAAGCTACCTGACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACTGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAACGGCTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTTTACTTTAG ATGTGTACGGACGGACCATCGGCGTGGGTCCGAAGCTGGAAAAATAGCGTGGGAGAGATTTGCTTAGGGCGGAAGTGGGAAGTCCATACTGCAAAAAAGCTACCTGACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACTGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAACGGCTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTTTACTTTAG MCTDGPSAWVRSWKNSVGEICLGRKWEVHTAKKLPDHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL
BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_011655841.1 (PREDICTED: uncharacterized protein LOC105435592 [Cucumis sativus] >KGN52208.1 hypothetical protein Csa_5G615300 [Cucumis sativus]) HSP 1 Score: 208.0 bits (528), Expect = 2.2e-50 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_008446780.1 (PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo]) HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46 Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_023549272.1 (uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177.6 bits (449), Expect = 3.2e-41 Identity = 101/121 (83.47%), Postives = 109/121 (90.08%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_022139143.1 (uncharacterized protein LOC111010120 [Momordica charantia]) HSP 1 Score: 176.4 bits (446), Expect = 7.2e-41 Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_022957096.1 (uncharacterized protein LOC111458579 [Cucurbita moschata]) HSP 1 Score: 172.6 bits (436), Expect = 1.0e-39 Identity = 99/121 (81.82%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. TAIR10
Match: AT4G40045.1 (unknown protein) HSP 1 Score: 86.3 bits (212), Expect = 1.8e-17 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|A0A0A0KRG8|A0A0A0KRG8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615300 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|A0A1S3BFX0|A0A1S3BFX0_CUCME (uncharacterized protein LOC103489407 OS=Cucumis melo OX=3656 GN=LOC103489407 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46 Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|A0A2C9VY13|A0A2C9VY13_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G202400 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26 Identity = 79/123 (64.23%), Postives = 91/123 (73.98%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|D7UBV1|D7UBV1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0074g00420 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 3.4e-23 Identity = 67/96 (69.79%), Postives = 81/96 (84.38%), Query Frame = 0
BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|A0A200Q2G4|A0A200Q2G4_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1711g38 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.7e-22 Identity = 69/111 (62.16%), Postives = 83/111 (74.77%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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