CsaV3_5G035650 (gene) Cucumber (Chinese Long) v3

NameCsaV3_5G035650
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTransmembrane protein
Locationchr5 : 28192504 .. 28194699 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTACGGACGGACCATCGGCGTGGGTCCGAAGCTGGAAAAATAGCGTGGGAGAGATTTGCTTAGGGCGGAAGTGGGAAGTCCATACTGCAAAAAAGCTACCGTTTGCGCTTTTTCTTTTCTTTTCATGTCATCATTTGATAATCTCCCCTCCTTCGTTAATAATTGTTTTTTTATTGATGTAAAAAATAATTTAAAACAAAAACAAAAGTTAAAATTACAAGGTGAAGTAAGATATTAGAGGCAAGTTTAATCTCAATTTCGTAGATATTGTTATATGTTTATATATATAGAAAATAGTTTAAATTGTTTATGAATATAACCAAAGTTTAACAACTATATAGATATATACATCTACGAAAATGTGAGCGATAGCGGACAAAGATTCATTAATATATATCAACATGTCATATATTTATAACTATTTTGGTTCGTGTATATAATTAGAGGAGTTTGGTAATATTTTGTTTGTGTTTATGAGGTTTTATCTAAACTTTTATGTTATCTCTTCAAGTTTTAGGTTACGTTTGTCCATACGATTTTAAAAATATTTTGGTGAGGTTTTGTTTGTGTCCCAAAATCACACTATGTATCAAATTGTTTGTTGTTGAGGATTGTATTCCATTCAAATGAAAACACTTTTATCTATTTAATTAAATTGAAAAATAAATTTATATTTTTTATATGGTAAATTTTAATGTTATTAACTTTTTTAACAAAATTTAGTTTGACTAAATTTAAGGTTACCGAAAGTGTGCACAGGCTAAGATCAAACATTTAAACATACTAAAATTATGAACAGATTAAACTCCAAAGAATAATGATCAAGATGGTATTACCTATAACCAATAATACATTTAGTCATTTATTTTGGACCAGGGGTCATCGTCCCATAATATTGTTTATTTAAATTTAACATTTGTGACTTTATTTTTTGAATAGATTAAAATATCTTATCCTAATCAAAATAGTTGTTATTATGACACAAGTTTTTTATTGAATTTATTTTATTGTTCTCAGTTATATCTAGCACAACTCTCAAACGAGTTAGAAGAGGTTAATTACTTTATGATTGAAAACTGCAAAGACAAAAAAAACTATTTTCATATTAATTGATTTAAACACTCCTCCAACAAGTCGCAACTATTTCATTTGATCAATCTTATTTATACGATAAAAGCATGCAATCTTAAACAAAAGAAATACAATTCACTTGATTTATAAAATACCTCAAATGGGGATATTAAGCTCAACTAAAATTATCGGCTTTGATCTAGAGAACTGTAGGGTGTATTGTTATTTTATATGTACATAATATGCATCTTCACGAACTCACCTTGCATTCTCTTATGTTTAGTTTGAATGTTCGCAACCTTAAAAGGGCTTGTACTTCTATTGTGAGATCGAAAATAACAGCTCTCATCGAGATATTTTTTTCTTGAGTTATCTGTACAGGAATTCAATGGAACAAATTAAATATAAATCAAAATGAAATAATATATATATAGAAAAACAGAACTAGCTTTGAAATTGGTCTAATTAAAAATAAAAATAACGCCCGGCGTTCTACAACGCACATTTACTACTAAGTTCCTACCCTCCCCATCTCTTCCCGTCTTGTTTCCATCGCCCGAAAACCATGTGTGCTGCGAACCGCTATAGATTTCGGGAACGTTTCGGACAAAATTGAACCAAAAATCAATACAACAATGTTAGGGTTTCTCACAATCCCACACCAATTGAAGGTTTCCCCATCTTTCGCTTCAATCTCATCACCTTCTTCCCTCTTTCGTCCACTCTACAAATTTCCTATCCATCACACATTTTACAACTCCCAATTTCTAATTTCCAGTGACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACTGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAACGGCTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTTTACTTTAG

mRNA sequence

ATGTGTACGGACGGACCATCGGCGTGGGTCCGAAGCTGGAAAAATAGCGTGGGAGAGATTTGCTTAGGGCGGAAGTGGGAAGTCCATACTGCAAAAAAGCTACCTGACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACTGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAACGGCTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTTTACTTTAG

Coding sequence (CDS)

ATGTGTACGGACGGACCATCGGCGTGGGTCCGAAGCTGGAAAAATAGCGTGGGAGAGATTTGCTTAGGGCGGAAGTGGGAAGTCCATACTGCAAAAAAGCTACCTGACCACAGAAGATTCACAGCGTTTGCGAGCAACAAGAACACTGAATTTGGCGGAAGTATAAAGGAAAGAGAAGGAGAAAGAAATGGGGCAAACGGCTCCTCTAATGGCGGCGATGACTTGAAGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTTTTGATCGACCCGGATCCTGATAACATCTTGGCCGTTGCGTTGACTGGTTTGCTTGCTTGGGCAAGTGTGCAGGTCTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTATTCTTTTATTGCCGCGCTTCTTCTTTTCATTCTAATTACTTTACTTTAG

Protein sequence

MCTDGPSAWVRSWKNSVGEICLGRKWEVHTAKKLPDHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL
BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_011655841.1 (PREDICTED: uncharacterized protein LOC105435592 [Cucumis sativus] >KGN52208.1 hypothetical protein Csa_5G615300 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 2.2e-50
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0

Query: 36  DHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPD 95
           DHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPD
Sbjct: 49  DHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPD 108

Query: 96  PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 149
           PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL
Sbjct: 109 PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161

BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_008446780.1 (PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo])

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46
Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0

Query: 36  DHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPD 95
           + RRFTA ASNKNTEFGGSIKEREGERNGA  SSNGGDDLKKERGPVFNIKWAELLIDPD
Sbjct: 74  NRRRFTASASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPD 133

Query: 96  PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 149
           PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 134 PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 186

BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_023549272.1 (uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.6 bits (449), Expect = 3.2e-41
Identity = 101/121 (83.47%), Postives = 109/121 (90.08%), Query Frame = 0

Query: 29  HTAKKLPDHR-RFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKW 88
           ++  ++P  R RFTA ASN +   GG+IKEREGERNGA G SNGGDDL+KERGPVFNIKW
Sbjct: 45  YSESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKG-SNGGDDLRKERGPVFNIKW 104

Query: 89  AELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITL 148
           AELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITL
Sbjct: 105 AELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITL 164

BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_022139143.1 (uncharacterized protein LOC111010120 [Momordica charantia])

HSP 1 Score: 176.4 bits (446), Expect = 7.2e-41
Identity = 101/120 (84.17%), Postives = 108/120 (90.00%), Query Frame = 0

Query: 30  TAKKLPDHR-RFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWA 89
           T  ++P +R RFTAF+ N +   GG+IKEREGER GA G SNGGDDLKKERGPVFNIKWA
Sbjct: 50  TRSQIPRNRARFTAFSGNGDNGLGGNIKEREGERTGAKG-SNGGDDLKKERGPVFNIKWA 109

Query: 90  ELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 149
           ELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 110 ELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 168

BLAST of CsaV3_5G035650 vs. NCBI nr
Match: XP_022957096.1 (uncharacterized protein LOC111458579 [Cucurbita moschata])

HSP 1 Score: 172.6 bits (436), Expect = 1.0e-39
Identity = 99/121 (81.82%), Postives = 107/121 (88.43%), Query Frame = 0

Query: 29  HTAKKLPDHR-RFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKW 88
           ++  ++P  R RFTA ASN +   GG+IKEREGERNGA G S G DDL+KERGPVFNIKW
Sbjct: 45  YSESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKG-SKGDDDLRKERGPVFNIKW 104

Query: 89  AELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITL 148
           AELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITL
Sbjct: 105 AELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITL 164

BLAST of CsaV3_5G035650 vs. TAIR10
Match: AT4G40045.1 (unknown protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-17
Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 0

Query: 68  SSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAIL 127
           +++ G+  KK++   F+ KW ELL +PD DN +AV L G+L WAS+QVL QLFFIS AIL
Sbjct: 61  TNDDGNGSKKDQFAGFSFKWGELL-NPDQDNFVAVGLAGVLTWASLQVLSQLFFISFAIL 120

Query: 128 VAALKYSFIAALLLFILITLL 149
           VAALKYSFIAALL+FIL+TLL
Sbjct: 121 VAALKYSFIAALLIFILVTLL 140

BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|A0A0A0KRG8|A0A0A0KRG8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615300 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0

Query: 36  DHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPD 95
           DHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPD
Sbjct: 49  DHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPD 108

Query: 96  PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 149
           PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL
Sbjct: 109 PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161

BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|A0A1S3BFX0|A0A1S3BFX0_CUCME (uncharacterized protein LOC103489407 OS=Cucumis melo OX=3656 GN=LOC103489407 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46
Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0

Query: 36  DHRRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPD 95
           + RRFTA ASNKNTEFGGSIKEREGERNGA  SSNGGDDLKKERGPVFNIKWAELLIDPD
Sbjct: 74  NRRRFTASASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPD 133

Query: 96  PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 149
           PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 134 PDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 186

BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|A0A2C9VY13|A0A2C9VY13_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G202400 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26
Identity = 79/123 (64.23%), Postives = 91/123 (73.98%), Query Frame = 0

Query: 28  VHTAKKLPDHR-RFTAFASNKNTEFGGSIKEREGER-NGANGSSNGGDDLKKERGPVFNI 87
           + T  K+P  + RF  FA N N    G  KE++ E+ NG+  +   GDDLKK R P+ NI
Sbjct: 28  LQTDIKIPKFQSRFLIFALNNNN--SGEPKEQKQEKLNGSTDNGTNGDDLKKNRPPLLNI 87

Query: 88  KWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILI 147
           KW ELL+D DPDNILAVALTGLL WAS QVLWQLF +S AILVAALKYSFIAALL+FILI
Sbjct: 88  KWGELLLDSDPDNILAVALTGLLTWASAQVLWQLFLVSAAILVAALKYSFIAALLIFILI 147

Query: 148 TLL 149
           TLL
Sbjct: 148 TLL 148

BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|D7UBV1|D7UBV1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0074g00420 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-23
Identity = 67/96 (69.79%), Postives = 81/96 (84.38%), Query Frame = 0

Query: 53  GSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWAS 112
           G+ KE E E+   NG   GG+DLKK++GP+ N+KW +LL DP+P+NILA+ L+G+L WAS
Sbjct: 102 GNGKEGEEEKRSKNG---GGEDLKKDKGPILNVKWRDLL-DPNPENILAIGLSGVLTWAS 161

Query: 113 VQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 149
           VQVLWQLFFISL ILVAALKYSFIAALL+FILITLL
Sbjct: 162 VQVLWQLFFISLTILVAALKYSFIAALLIFILITLL 193

BLAST of CsaV3_5G035650 vs. TrEMBL
Match: tr|A0A200Q2G4|A0A200Q2G4_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1711g38 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-22
Identity = 69/111 (62.16%), Postives = 83/111 (74.77%), Query Frame = 0

Query: 38  RRFTAFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPD 97
           RRF  FA N N +       ++  +   NG++NG +DLK++R    N+KW +LL DPDP+
Sbjct: 44  RRFVVFAENDNGQ------NKKDPKETGNGNNNGKEDLKRDRRLFLNLKWKDLL-DPDPE 103

Query: 98  NILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 149
           N +AV LTGLL WASVQVLWQL FISLAILVAALKYSFIAALL+FILITLL
Sbjct: 104 NFVAVGLTGLLTWASVQVLWQLLFISLAILVAALKYSFIAALLIFILITLL 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011655841.12.2e-50100.00PREDICTED: uncharacterized protein LOC105435592 [Cucumis sativus] >KGN52208.1 hy... [more]
XP_008446780.12.5e-4694.69PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo][more]
XP_023549272.13.2e-4183.47uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo][more]
XP_022139143.17.2e-4184.17uncharacterized protein LOC111010120 [Momordica charantia][more]
XP_022957096.11.0e-3981.82uncharacterized protein LOC111458579 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT4G40045.11.8e-1764.20unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KRG8|A0A0A0KRG8_CUCSA1.5e-50100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615300 PE=4 SV=1[more]
tr|A0A1S3BFX0|A0A1S3BFX0_CUCME1.7e-4694.69uncharacterized protein LOC103489407 OS=Cucumis melo OX=3656 GN=LOC103489407 PE=... [more]
tr|A0A2C9VY13|A0A2C9VY13_MANES1.9e-2664.23Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G202400 PE=4 SV=... [more]
tr|D7UBV1|D7UBV1_VITVI3.4e-2369.79Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0074g00420 PE=4 SV=... [more]
tr|A0A200Q2G4|A0A200Q2G4_9MAGN1.7e-2262.16Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1711g38 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G035650.1CsaV3_5G035650.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..78
NoneNo IPR availablePANTHERPTHR36789FAMILY NOT NAMEDcoord: 35..148

The following gene(s) are paralogous to this gene:

None