Cp4.1LG01g14320 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g14320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTransmembrane protein, putative
LocationCp4.1LG01 : 7659359 .. 7659853 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAATGTTAGGGTTTCTTACTATCCCATACCAATGGAAGATTTCCCCATCTCTCTCTTCATCTTCATCACCTTTTTCCCTCTCAACGAGATCTTCCCTCTCCTTTCCACTCTTCAAATTCCCTCTCCATTACTCGGAATCTCAAATTCCTGGTAAACGCAAAAGATTCACGGCGTTGGCGAGTAATAACGACAATGGATTGGGCGGGAATATCAAGGAGAGAGAAGGAGAAAGAAATGGAGCGAAGGGCTCCAATGGCGGCGATGACTTGAGGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTCTTAATCGATCCGGATCCTGATAACATCTTGGCCGTGGCGTTGACTGGCTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTCTAATTACATTACTATAG

mRNA sequence

ATGACAATGTTAGGGTTTCTTACTATCCCATACCAATGGAAGATTTCCCCATCTCTCTCTTCATCTTCATCACCTTTTTCCCTCTCAACGAGATCTTCCCTCTCCTTTCCACTCTTCAAATTCCCTCTCCATTACTCGGAATCTCAAATTCCTGGTAAACGCAAAAGATTCACGGCGTTGGCGAGTAATAACGACAATGGATTGGGCGGGAATATCAAGGAGAGAGAAGGAGAAAGAAATGGAGCGAAGGGCTCCAATGGCGGCGATGACTTGAGGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTCTTAATCGATCCGGATCCTGATAACATCTTGGCCGTGGCGTTGACTGGCTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTCTAATTACATTACTATAG

Coding sequence (CDS)

ATGACAATGTTAGGGTTTCTTACTATCCCATACCAATGGAAGATTTCCCCATCTCTCTCTTCATCTTCATCACCTTTTTCCCTCTCAACGAGATCTTCCCTCTCCTTTCCACTCTTCAAATTCCCTCTCCATTACTCGGAATCTCAAATTCCTGGTAAACGCAAAAGATTCACGGCGTTGGCGAGTAATAACGACAATGGATTGGGCGGGAATATCAAGGAGAGAGAAGGAGAAAGAAATGGAGCGAAGGGCTCCAATGGCGGCGATGACTTGAGGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTCTTAATCGATCCGGATCCTGATAACATCTTGGCCGTGGCGTTGACTGGCTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTCTAATTACATTACTATAG

Protein sequence

MTMLGFLTIPYQWKISPSLSSSSSPFSLSTRSSLSFPLFKFPLHYSESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGGDDLRKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
BLAST of Cp4.1LG01g14320 vs. TrEMBL
Match: A0A0A0KRG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615300 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-52
Identity = 127/167 (76.05%), Postives = 139/167 (83.23%), Query Frame = 1

Query: 3   MLGFLTIPYQWKISPSLSSSSSPFSLSTRSSLSFPLFKFPLHY----SESQIPGKRKRFT 62
           MLGFLTIP+Q K+SPS +S SSP      SSL  PL+KFP+H+    S+  I    +RFT
Sbjct: 1   MLGFLTIPHQLKVSPSFASISSP------SSLFRPLYKFPIHHTFYNSQFLISSDHRRFT 60

Query: 63  ALASNNDNGLGGNIKEREGERNGAKG-SNGGDDLRKERGPVFNIKWAELLIDPDPDNILA 122
           A ASN +   GG+IKEREGERNGA G SNGGDDL+KERGPVFNIKWAELLIDPDPDNILA
Sbjct: 61  AFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILA 120

Query: 123 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 121 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161

BLAST of Cp4.1LG01g14320 vs. TrEMBL
Match: A0A067L981_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01521 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-26
Identity = 84/153 (54.90%), Postives = 105/153 (68.63%), Query Frame = 1

Query: 17  PSLSSSSSPFSLSTRSSLSFPLFKFPLHYSESQIPGKRKRFTALASNNDNGLGGNIKERE 76
           PS++S  +P       +L+F  F    H+   +IP  + RF   A  N+N     ++E+E
Sbjct: 13  PSIASLPTP-------NLAFISFLPRTHF---KIPKTQSRFLFFAQTNNNSPEPKLQEKE 72

Query: 77  GER----NGAKGSNGG-DDLRKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQV 136
                  NG  GSNGG DD +K+R P+ NIKW ELL+DPDPDNI+AV LTGLL WASVQV
Sbjct: 73  KLNGFTDNGGGGSNGGGDDPKKDRSPLLNIKWVELLLDPDPDNIIAVGLTGLLTWASVQV 132

Query: 137 LWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           LWQLF +S++ILVAALKYSFIAALL+FILITLL
Sbjct: 133 LWQLFIVSVSILVAALKYSFIAALLLFILITLL 155

BLAST of Cp4.1LG01g14320 vs. TrEMBL
Match: M5X0G0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011136mg PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-23
Identity = 82/153 (53.59%), Postives = 108/153 (70.59%), Query Frame = 1

Query: 16  SPSLSSSSSPFSLSTRSSLSFPLFKFPLHYSESQIPGKRKRFTALASNNDNGLGGNIKER 75
           S +L S+S P S+ +++ L+       L   ++QIP K K+F   A+N       + KER
Sbjct: 79  SAALISTSRPLSIPSQTLLNSSAL---LVKPQTQIPRKPKKFVVFANNP------SAKER 138

Query: 76  EGERNGAK--GSNGGDD-LRKERGPVF-NIKWAELLIDPDPDNILAVALTGLLAWASVQV 135
           E E++  +  G  GGDD LR+ + P+F NI+W +LL+DPDP+NILAV LTGLL WASVQV
Sbjct: 139 EEEKDKEEEIGFGGGDDDLRENQRPLFGNIRWGDLLLDPDPNNILAVGLTGLLTWASVQV 198

Query: 136 LWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           LWQL FI+LAILVAA+KYSFIAA+L+FILI LL
Sbjct: 199 LWQLVFIALAILVAAVKYSFIAAVLLFILIALL 222

BLAST of Cp4.1LG01g14320 vs. TrEMBL
Match: W9RHI9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010155 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-23
Identity = 89/150 (59.33%), Postives = 104/150 (69.33%), Query Frame = 1

Query: 25  PFSLSTRSSLSFPLFK----FPLHYSESQIPGKRKRFTALASN--NDNGLGGNIKER--E 84
           P SL++R  LS PL +    FP  + +S  P +  R   LASN  N+N L  +  ER   
Sbjct: 84  PVSLTSRP-LSRPLKETHLYFPYGFLKSYAPRRPTRVLTLASNDNNNNELRKDPNERGEN 143

Query: 85  GERNGAKGSNGGDDLRKERG-PVFN-IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQ 144
           GE+    G+NG D L KE G  +FN I+W ELL +PDPDNILAV LTGLL WASVQVLWQ
Sbjct: 144 GEKREGLGANGRDGLGKENGRSIFNSIRWGELL-NPDPDNILAVGLTGLLTWASVQVLWQ 203

Query: 145 LFFISLAILVAALKYSFIAALLIFILITLL 165
           L FISLAIL+AA+KYSFIAALLIFILITLL
Sbjct: 204 LLFISLAILLAAIKYSFIAALLIFILITLL 231

BLAST of Cp4.1LG01g14320 vs. TrEMBL
Match: M1CLZ6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027341 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-23
Identity = 81/152 (53.29%), Postives = 99/152 (65.13%), Query Frame = 1

Query: 15  ISPSLSSSSSPFSLSTRSSLSFPLFKFPLHYSESQIPGKRKRFTALASNNDNGLGGNIKE 74
           ISPS S         TR+  SF     P+H  +S+I  KRK F   A+ N N    N +E
Sbjct: 7   ISPSYSLPILQNPSITRTHFSFS----PIHTPKSKICPKRKHFLVFAAENGNNNTEN-QE 66

Query: 75  REGERNGAKGSNGGDDLRKERG--PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVL 134
              + NG+   NG +D   + G  P  N++W +LL+DPDPDNI+AV LTGLL WASV +L
Sbjct: 67  NGLKNNGSSNGNGSNDGNGDGGGKPRLNLRWMDLLLDPDPDNIVAVGLTGLLTWASVSIL 126

Query: 135 WQLFFISLAILVAALKYSFIAALLIFILITLL 165
           WQLF I+LAIL+AALKYSFIAALLIFILITLL
Sbjct: 127 WQLFVIALAILLAALKYSFIAALLIFILITLL 153

BLAST of Cp4.1LG01g14320 vs. TAIR10
Match: AT4G40045.1 (AT4G40045.1 unknown protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 63/128 (49.22%), Postives = 81/128 (63.28%), Query Frame = 1

Query: 37  PLFKFPLHYSESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGGDDLRKERG 96
           P F + + +    I   +     L +N  NG   + KE  G  N    ++ G+  +K++ 
Sbjct: 15  PRFSYNIPHHHHHIRLCKSPSLILRTNAQNG-NDSAKESSGGGNRPVTNDDGNGSKKDQF 74

Query: 97  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL 156
             F+ KW ELL +PD DN +AV L G+L WAS+QVL QLFFIS AILVAALKYSFIAALL
Sbjct: 75  AGFSFKWGELL-NPDQDNFVAVGLAGVLTWASLQVLSQLFFISFAILVAALKYSFIAALL 134

Query: 157 IFILITLL 165
           IFIL+TLL
Sbjct: 135 IFILVTLL 140

BLAST of Cp4.1LG01g14320 vs. NCBI nr
Match: gi|659091876|ref|XP_008446780.1| (PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 3.2e-54
Identity = 132/168 (78.57%), Postives = 143/168 (85.12%), Query Frame = 1

Query: 2   TMLGFLTIPYQWKISPSLSSSSSPFSLSTRSSLSFPLFKFPLHY----SESQIPGKRKRF 61
           TMLGFLTIP+Q KISPSL+S  S   +S+ SSL  PL+KFPLH+    S+  I   R+RF
Sbjct: 22  TMLGFLTIPHQLKISPSLASLPS---ISSPSSLFLPLYKFPLHHTFFNSKFLISSNRRRF 81

Query: 62  TALASNNDNGLGGNIKEREGERNGAKG-SNGGDDLRKERGPVFNIKWAELLIDPDPDNIL 121
           TA ASN +   GG+IKEREGERNGAK  SNGGDDL+KERGPVFNIKWAELLIDPDPDNIL
Sbjct: 82  TASASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDPDNIL 141

Query: 122 AVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           AVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Sbjct: 142 AVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 186

BLAST of Cp4.1LG01g14320 vs. NCBI nr
Match: gi|778706388|ref|XP_011655841.1| (PREDICTED: uncharacterized protein LOC105435592 [Cucumis sativus])

HSP 1 Score: 214.2 bits (544), Expect = 1.8e-52
Identity = 127/167 (76.05%), Postives = 139/167 (83.23%), Query Frame = 1

Query: 3   MLGFLTIPYQWKISPSLSSSSSPFSLSTRSSLSFPLFKFPLHY----SESQIPGKRKRFT 62
           MLGFLTIP+Q K+SPS +S SSP      SSL  PL+KFP+H+    S+  I    +RFT
Sbjct: 1   MLGFLTIPHQLKVSPSFASISSP------SSLFRPLYKFPIHHTFYNSQFLISSDHRRFT 60

Query: 63  ALASNNDNGLGGNIKEREGERNGAKG-SNGGDDLRKERGPVFNIKWAELLIDPDPDNILA 122
           A ASN +   GG+IKEREGERNGA G SNGGDDL+KERGPVFNIKWAELLIDPDPDNILA
Sbjct: 61  AFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILA 120

Query: 123 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 121 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161

BLAST of Cp4.1LG01g14320 vs. NCBI nr
Match: gi|802547375|ref|XP_012089894.1| (PREDICTED: uncharacterized protein LOC105648190 [Jatropha curcas])

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-26
Identity = 84/153 (54.90%), Postives = 105/153 (68.63%), Query Frame = 1

Query: 17  PSLSSSSSPFSLSTRSSLSFPLFKFPLHYSESQIPGKRKRFTALASNNDNGLGGNIKERE 76
           PS++S  +P       +L+F  F    H+   +IP  + RF   A  N+N     ++E+E
Sbjct: 13  PSIASLPTP-------NLAFISFLPRTHF---KIPKTQSRFLFFAQTNNNSPEPKLQEKE 72

Query: 77  GER----NGAKGSNGG-DDLRKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQV 136
                  NG  GSNGG DD +K+R P+ NIKW ELL+DPDPDNI+AV LTGLL WASVQV
Sbjct: 73  KLNGFTDNGGGGSNGGGDDPKKDRSPLLNIKWVELLLDPDPDNIIAVGLTGLLTWASVQV 132

Query: 137 LWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           LWQLF +S++ILVAALKYSFIAALL+FILITLL
Sbjct: 133 LWQLFIVSVSILVAALKYSFIAALLLFILITLL 155

BLAST of Cp4.1LG01g14320 vs. NCBI nr
Match: gi|764627904|ref|XP_011469307.1| (PREDICTED: uncharacterized protein LOC105352905 [Fragaria vesca subsp. vesca])

HSP 1 Score: 122.1 bits (305), Expect = 9.1e-25
Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 1

Query: 47  ESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGGDDLRKERGPVF-NIKWAE 106
           ++QIP +  RF ALA+NN NGL    +E + +  G   + GGD+  K +  +F NI+W +
Sbjct: 38  KTQIPKRSIRFIALANNN-NGLNQEKQEEKEKEQGIGSNGGGDESGKNQRSIFSNIRWGD 97

Query: 107 LLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           LL+DPDP+NILAV LTGLL WASVQVLWQL FISLAILVAA+KYSFIAA+L+FILITLL
Sbjct: 98  LLLDPDPNNILAVGLTGLLTWASVQVLWQLLFISLAILVAAVKYSFIAAVLLFILITLL 155

BLAST of Cp4.1LG01g14320 vs. NCBI nr
Match: gi|657968040|ref|XP_008375714.1| (PREDICTED: uncharacterized protein LOC103438948 [Malus domestica])

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-24
Identity = 84/157 (53.50%), Postives = 104/157 (66.24%), Query Frame = 1

Query: 24  SPFSLSTRSSLSFPLFKFPLHYS-----ESQIPGKRKRFTALASNNDNGL--GGNIKERE 83
           +P  ++T  S+ FP     L++S     ++QIP   KRF   A NN NGL    N +ERE
Sbjct: 8   TPPPIATLPSIPFPSLHIHLNFSSYSPLKTQIPKIPKRFVVFA-NNGNGLKQDSNSEERE 67

Query: 84  GERN--------GAKGSNGGDDLRKERGPVF-NIKWAELLIDPDPDNILAVALTGLLAWA 143
                       G+ G  G DDL K + P+F NI+W +LL+DPDP+NILAV LTGLL WA
Sbjct: 68  EREEEKGDEEGIGSDGGGGDDDLGKNQRPLFGNIRWGDLLLDPDPNNILAVGLTGLLTWA 127

Query: 144 SVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           SVQVLWQL FI+LAILVAA+KYSFIAA+L+FILI LL
Sbjct: 128 SVQVLWQLLFIALAILVAAVKYSFIAAVLLFILIALL 163

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KRG8_CUCSA1.2e-5276.05Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615300 PE=4 SV=1[more]
A0A067L981_JATCU2.0e-2654.90Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01521 PE=4 SV=1[more]
M5X0G0_PRUPE2.7e-2353.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011136mg PE=4 SV=1[more]
W9RHI9_9ROSA4.5e-2359.33Uncharacterized protein OS=Morus notabilis GN=L484_010155 PE=4 SV=1[more]
M1CLZ6_SOLTU4.5e-2353.29Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027341 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G40045.11.1e-1749.22 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659091876|ref|XP_008446780.1|3.2e-5478.57PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo][more]
gi|778706388|ref|XP_011655841.1|1.8e-5276.05PREDICTED: uncharacterized protein LOC105435592 [Cucumis sativus][more]
gi|802547375|ref|XP_012089894.1|2.8e-2654.90PREDICTED: uncharacterized protein LOC105648190 [Jatropha curcas][more]
gi|764627904|ref|XP_011469307.1|9.1e-2562.18PREDICTED: uncharacterized protein LOC105352905 [Fragaria vesca subsp. vesca][more]
gi|657968040|ref|XP_008375714.1|2.6e-2453.50PREDICTED: uncharacterized protein LOC103438948 [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g14320.1Cp4.1LG01g14320.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36789FAMILY NOT NAMEDcoord: 61..164
score: 1.4
NoneNo IPR availablePANTHERPTHR36789:SF1SUBFAMILY NOT NAMEDcoord: 61..164
score: 1.4

The following gene(s) are paralogous to this gene:

None