CmaCh04G014170 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G014170
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTransmembrane protein, putative
LocationCma_Chr04 : 7247606 .. 7248100 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAATGTTAGGGTTTCTTACTATCCCATACCAATGGAAGATTTCCCCATCTCTCTCTTCATCTTCATCACCTTTTCCCCTCTCAACGAGATCTTTCCTCTCCTTTCCACTCTTCAAATTCCCTCTCCATTACTCGGAATCTCAAATTTCTGGTAAACGCAAAAGATTCGCGGCGTTGGCGAGTAATAACGACAATGGATTGGGCGGAAATATCAAGGAGAGAGAAGGAGAAAGAAATGGAGCGAAGGGATCCAAGGGCGACGATGACTTGAGGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTCTTAATCGATCCGGATCCTGATAACATCTTGGCCGTGGCGTTGACTGGCTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTCTAATTACATTACTATAG

mRNA sequence

ATGACAATGTTAGGGTTTCTTACTATCCCATACCAATGGAAGATTTCCCCATCTCTCTCTTCATCTTCATCACCTTTTCCCCTCTCAACGAGATCTTTCCTCTCCTTTCCACTCTTCAAATTCCCTCTCCATTACTCGGAATCTCAAATTTCTGGTAAACGCAAAAGATTCGCGGCGTTGGCGAGTAATAACGACAATGGATTGGGCGGAAATATCAAGGAGAGAGAAGGAGAAAGAAATGGAGCGAAGGGATCCAAGGGCGACGATGACTTGAGGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTCTTAATCGATCCGGATCCTGATAACATCTTGGCCGTGGCGTTGACTGGCTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTCTAATTACATTACTATAG

Coding sequence (CDS)

ATGACAATGTTAGGGTTTCTTACTATCCCATACCAATGGAAGATTTCCCCATCTCTCTCTTCATCTTCATCACCTTTTCCCCTCTCAACGAGATCTTTCCTCTCCTTTCCACTCTTCAAATTCCCTCTCCATTACTCGGAATCTCAAATTTCTGGTAAACGCAAAAGATTCGCGGCGTTGGCGAGTAATAACGACAATGGATTGGGCGGAAATATCAAGGAGAGAGAAGGAGAAAGAAATGGAGCGAAGGGATCCAAGGGCGACGATGACTTGAGGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTCTTAATCGATCCGGATCCTGATAACATCTTGGCCGTGGCGTTGACTGGCTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGCTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCTTAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTCTAATTACATTACTATAG

Protein sequence

MTMLGFLTIPYQWKISPSLSSSSSPFPLSTRSFLSFPLFKFPLHYSESQISGKRKRFAALASNNDNGLGGNIKEREGERNGAKGSKGDDDLRKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
BLAST of CmaCh04G014170 vs. TrEMBL
Match: A0A0A0KRG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615300 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.1e-50
Identity = 124/167 (74.25%), Postives = 136/167 (81.44%), Query Frame = 1

Query: 3   MLGFLTIPYQWKISPSLSSSSSPFPLSTRSFLSFPLFKFPLHY----SESQISGKRKRFA 62
           MLGFLTIP+Q K+SPS +S SSP      S L  PL+KFP+H+    S+  IS   +RF 
Sbjct: 1   MLGFLTIPHQLKVSPSFASISSP------SSLFRPLYKFPIHHTFYNSQFLISSDHRRFT 60

Query: 63  ALASNNDNGLGGNIKEREGERNGAKGSK-GDDDLRKERGPVFNIKWAELLIDPDPDNILA 122
           A ASN +   GG+IKEREGERNGA GS  G DDL+KERGPVFNIKWAELLIDPDPDNILA
Sbjct: 61  AFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILA 120

Query: 123 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 121 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161

BLAST of CmaCh04G014170 vs. TrEMBL
Match: A0A067L981_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01521 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-24
Identity = 81/155 (52.26%), Postives = 101/155 (65.16%), Query Frame = 1

Query: 15  ISPSLSSSSSPFPLSTRSFLSFPLFKFPLHYSESQISGKRKRFAALASNNDNGLGGNIKE 74
           +SP    S +  P    +F+SF      L  +  +I   + RF   A  N+N     ++E
Sbjct: 7   LSPPPLPSIASLPTPNLAFISF------LPRTHFKIPKTQSRFLFFAQTNNNSPEPKLQE 66

Query: 75  REGER----NGAKGSKGD-DDLRKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASV 134
           +E       NG  GS G  DD +K+R P+ NIKW ELL+DPDPDNI+AV LTGLL WASV
Sbjct: 67  KEKLNGFTDNGGGGSNGGGDDPKKDRSPLLNIKWVELLLDPDPDNIIAVGLTGLLTWASV 126

Query: 135 QVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           QVLWQLF +S++ILVAALKYSFIAALL+FILITLL
Sbjct: 127 QVLWQLFIVSVSILVAALKYSFIAALLLFILITLL 155

BLAST of CmaCh04G014170 vs. TrEMBL
Match: M1CLZ6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027341 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.0e-24
Identity = 81/152 (53.29%), Postives = 99/152 (65.13%), Query Frame = 1

Query: 15  ISPSLSSSSSPFPLSTRSFLSFPLFKFPLHYSESQISGKRKRFAALASNNDNGLGGNIKE 74
           ISPS S      P  TR+  SF     P+H  +S+I  KRK F   A+ N N    N +E
Sbjct: 7   ISPSYSLPILQNPSITRTHFSFS----PIHTPKSKICPKRKHFLVFAAENGNNNTEN-QE 66

Query: 75  REGERNGAKGSKGDDDLRKERG--PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVL 134
              + NG+    G +D   + G  P  N++W +LL+DPDPDNI+AV LTGLL WASV +L
Sbjct: 67  NGLKNNGSSNGNGSNDGNGDGGGKPRLNLRWMDLLLDPDPDNIVAVGLTGLLTWASVSIL 126

Query: 135 WQLFFISLAILVAALKYSFIAALLIFILITLL 165
           WQLF I+LAIL+AALKYSFIAALLIFILITLL
Sbjct: 127 WQLFVIALAILLAALKYSFIAALLIFILITLL 153

BLAST of CmaCh04G014170 vs. TrEMBL
Match: B9T3G3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0442770 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.8e-23
Identity = 90/168 (53.57%), Postives = 106/168 (63.10%), Query Frame = 1

Query: 3   MLGFLTIPYQWKISPSLSSSSSPFPLSTRSFLSFPLFKFPLHYSESQISGKRKRFAALAS 62
           MLGF  +     I   +SS S P       F SFPL K  L +S++Q SG    F   A 
Sbjct: 1   MLGFKPL-----IRSPISSISRPI----FHFTSFPL-KTQLKFSKTQ-SG----FILFAQ 60

Query: 63  NNDNG--LGGNIKEREGERNGAKGSKGD----DDLRKERGPVFNIKWAELLIDPDPDNIL 122
           NN N   +     + + + NG+  + GD    DDLR  R  +FNIK  +LL+DPDPDNIL
Sbjct: 61  NNSNNNQIQEPSNQEQQQNNGSPKNSGDADNDDDLRGSRNSLFNIKLGDLLLDPDPDNIL 120

Query: 123 AVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           AV LTGLLAWAS QVLWQLF +S AILVAALKYSFIAALL+FILITLL
Sbjct: 121 AVGLTGLLAWASAQVLWQLFVVSFAILVAALKYSFIAALLVFILITLL 153

BLAST of CmaCh04G014170 vs. TrEMBL
Match: M5X0G0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011136mg PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-22
Identity = 79/153 (51.63%), Postives = 105/153 (68.63%), Query Frame = 1

Query: 16  SPSLSSSSSPFPLSTRSFLSFPLFKFPLHYSESQISGKRKRFAALASNNDNGLGGNIKER 75
           S +L S+S P  + +++ L+       L   ++QI  K K+F   A+N       + KER
Sbjct: 79  SAALISTSRPLSIPSQTLLNSSAL---LVKPQTQIPRKPKKFVVFANNP------SAKER 138

Query: 76  EGERNGAKG---SKGDDDLRKERGPVF-NIKWAELLIDPDPDNILAVALTGLLAWASVQV 135
           E E++  +      GDDDLR+ + P+F NI+W +LL+DPDP+NILAV LTGLL WASVQV
Sbjct: 139 EEEKDKEEEIGFGGGDDDLRENQRPLFGNIRWGDLLLDPDPNNILAVGLTGLLTWASVQV 198

Query: 136 LWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           LWQL FI+LAILVAA+KYSFIAA+L+FILI LL
Sbjct: 199 LWQLVFIALAILVAAVKYSFIAAVLLFILIALL 222

BLAST of CmaCh04G014170 vs. TAIR10
Match: AT4G40045.1 (AT4G40045.1 unknown protein)

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16
Identity = 62/128 (48.44%), Postives = 79/128 (61.72%), Query Frame = 1

Query: 37  PLFKFPLHYSESQISGKRKRFAALASNNDNGLGGNIKEREGERNGAKGSKGDDDLRKERG 96
           P F + + +    I   +     L +N  NG   + KE  G  N    +   +  +K++ 
Sbjct: 15  PRFSYNIPHHHHHIRLCKSPSLILRTNAQNG-NDSAKESSGGGNRPVTNDDGNGSKKDQF 74

Query: 97  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL 156
             F+ KW ELL +PD DN +AV L G+L WAS+QVL QLFFIS AILVAALKYSFIAALL
Sbjct: 75  AGFSFKWGELL-NPDQDNFVAVGLAGVLTWASLQVLSQLFFISFAILVAALKYSFIAALL 134

Query: 157 IFILITLL 165
           IFIL+TLL
Sbjct: 135 IFILVTLL 140

BLAST of CmaCh04G014170 vs. NCBI nr
Match: gi|659091876|ref|XP_008446780.1| (PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo])

HSP 1 Score: 213.4 bits (542), Expect = 3.0e-52
Identity = 129/168 (76.79%), Postives = 140/168 (83.33%), Query Frame = 1

Query: 2   TMLGFLTIPYQWKISPSLSSSSSPFPLSTRSFLSFPLFKFPLHY----SESQISGKRKRF 61
           TMLGFLTIP+Q KISPSL+S  S   +S+ S L  PL+KFPLH+    S+  IS  R+RF
Sbjct: 22  TMLGFLTIPHQLKISPSLASLPS---ISSPSSLFLPLYKFPLHHTFFNSKFLISSNRRRF 81

Query: 62  AALASNNDNGLGGNIKEREGERNGAKGSK-GDDDLRKERGPVFNIKWAELLIDPDPDNIL 121
            A ASN +   GG+IKEREGERNGAK S  G DDL+KERGPVFNIKWAELLIDPDPDNIL
Sbjct: 82  TASASNKNTEFGGSIKEREGERNGAKSSSNGGDDLKKERGPVFNIKWAELLIDPDPDNIL 141

Query: 122 AVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           AVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Sbjct: 142 AVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 186

BLAST of CmaCh04G014170 vs. NCBI nr
Match: gi|778706388|ref|XP_011655841.1| (PREDICTED: uncharacterized protein LOC105435592 [Cucumis sativus])

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-50
Identity = 124/167 (74.25%), Postives = 136/167 (81.44%), Query Frame = 1

Query: 3   MLGFLTIPYQWKISPSLSSSSSPFPLSTRSFLSFPLFKFPLHY----SESQISGKRKRFA 62
           MLGFLTIP+Q K+SPS +S SSP      S L  PL+KFP+H+    S+  IS   +RF 
Sbjct: 1   MLGFLTIPHQLKVSPSFASISSP------SSLFRPLYKFPIHHTFYNSQFLISSDHRRFT 60

Query: 63  ALASNNDNGLGGNIKEREGERNGAKGSK-GDDDLRKERGPVFNIKWAELLIDPDPDNILA 122
           A ASN +   GG+IKEREGERNGA GS  G DDL+KERGPVFNIKWAELLIDPDPDNILA
Sbjct: 61  AFASNKNTEFGGSIKEREGERNGANGSSNGGDDLKKERGPVFNIKWAELLIDPDPDNILA 120

Query: 123 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALL+FILITLL
Sbjct: 121 VALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLLFILITLL 161

BLAST of CmaCh04G014170 vs. NCBI nr
Match: gi|802547375|ref|XP_012089894.1| (PREDICTED: uncharacterized protein LOC105648190 [Jatropha curcas])

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-24
Identity = 81/155 (52.26%), Postives = 101/155 (65.16%), Query Frame = 1

Query: 15  ISPSLSSSSSPFPLSTRSFLSFPLFKFPLHYSESQISGKRKRFAALASNNDNGLGGNIKE 74
           +SP    S +  P    +F+SF      L  +  +I   + RF   A  N+N     ++E
Sbjct: 7   LSPPPLPSIASLPTPNLAFISF------LPRTHFKIPKTQSRFLFFAQTNNNSPEPKLQE 66

Query: 75  REGER----NGAKGSKGD-DDLRKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASV 134
           +E       NG  GS G  DD +K+R P+ NIKW ELL+DPDPDNI+AV LTGLL WASV
Sbjct: 67  KEKLNGFTDNGGGGSNGGGDDPKKDRSPLLNIKWVELLLDPDPDNIIAVGLTGLLTWASV 126

Query: 135 QVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           QVLWQLF +S++ILVAALKYSFIAALL+FILITLL
Sbjct: 127 QVLWQLFIVSVSILVAALKYSFIAALLLFILITLL 155

BLAST of CmaCh04G014170 vs. NCBI nr
Match: gi|657968040|ref|XP_008375714.1| (PREDICTED: uncharacterized protein LOC103438948 [Malus domestica])

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-24
Identity = 84/157 (53.50%), Postives = 104/157 (66.24%), Query Frame = 1

Query: 24  SPFPLSTRSFLSFPLFKFPLHYS-----ESQISGKRKRFAALASNNDNGL--GGNIKERE 83
           +P P++T   + FP     L++S     ++QI    KRF   A NN NGL    N +ERE
Sbjct: 8   TPPPIATLPSIPFPSLHIHLNFSSYSPLKTQIPKIPKRFVVFA-NNGNGLKQDSNSEERE 67

Query: 84  GERN--------GAKGSKGDDDLRKERGPVF-NIKWAELLIDPDPDNILAVALTGLLAWA 143
                       G+ G  GDDDL K + P+F NI+W +LL+DPDP+NILAV LTGLL WA
Sbjct: 68  EREEEKGDEEGIGSDGGGGDDDLGKNQRPLFGNIRWGDLLLDPDPNNILAVGLTGLLTWA 127

Query: 144 SVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL 165
           SVQVLWQL FI+LAILVAA+KYSFIAA+L+FILI LL
Sbjct: 128 SVQVLWQLLFIALAILVAAVKYSFIAAVLLFILIALL 163

BLAST of CmaCh04G014170 vs. NCBI nr
Match: gi|694424174|ref|XP_009339865.1| (PREDICTED: uncharacterized protein LOC103932046 [Pyrus x bretschneideri])

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23
Identity = 81/145 (55.86%), Postives = 101/145 (69.66%), Query Frame = 1

Query: 27  PLSTRSFLSFPLFKFPLHYSESQISGKRKRFAALASN-NDNGLGGNIKEREGERN----- 86
           P S R+  +F  +  PL   ++QI    KRF   A+N N +    N +ERE E+      
Sbjct: 17  PPSLRTHFNFSSYS-PL---KTQIQKIPKRFVVFANNGNGSKQDSNSEEREEEKGDEEGI 76

Query: 87  GAKGSKGDDDLRKERGPVF-NIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFIS 146
           G+ G  GDDDL K + P+F NI+W +LL+DPDP+NILAV LTGLL WASVQVLWQL FI+
Sbjct: 77  GSDGGGGDDDLGKNQRPLFGNIRWGDLLLDPDPNNILAVGLTGLLTWASVQVLWQLLFIA 136

Query: 147 LAILVAALKYSFIAALLIFILITLL 165
           LAILVAA+KYSFIAA+L+FILI LL
Sbjct: 137 LAILVAAVKYSFIAAVLLFILIALL 157

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KRG8_CUCSA1.1e-5074.25Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615300 PE=4 SV=1[more]
A0A067L981_JATCU1.4e-2452.26Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01521 PE=4 SV=1[more]
M1CLZ6_SOLTU7.0e-2453.29Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027341 PE=4 SV=1[more]
B9T3G3_RICCO7.8e-2353.57Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0442770 PE=4 SV=1[more]
M5X0G0_PRUPE1.3e-2251.63Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011136mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G40045.11.3e-1648.44 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659091876|ref|XP_008446780.1|3.0e-5276.79PREDICTED: uncharacterized protein LOC103489407 [Cucumis melo][more]
gi|778706388|ref|XP_011655841.1|1.6e-5074.25PREDICTED: uncharacterized protein LOC105435592 [Cucumis sativus][more]
gi|802547375|ref|XP_012089894.1|2.0e-2452.26PREDICTED: uncharacterized protein LOC105648190 [Jatropha curcas][more]
gi|657968040|ref|XP_008375714.1|2.6e-2453.50PREDICTED: uncharacterized protein LOC103438948 [Malus domestica][more]
gi|694424174|ref|XP_009339865.1|1.7e-2355.86PREDICTED: uncharacterized protein LOC103932046 [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G014170.1CmaCh04G014170.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36789FAMILY NOT NAMEDcoord: 54..164
score: 1.9

The following gene(s) are paralogous to this gene:

None