Cp4.1LG17g05980 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGACCAAACGTATTAAAAGTCCACTGTACGGTCCATTTGTAGATGTGGCAAAGGGTTATTCGTAGTATTATTCAGTGCCCCCTCTTCTCTTCTCTTCTCTTCCCCGATCTCAATTTCCTCTCTTCCCCTCTCTCTCTCTCTCTCTCCGCTGTTCCCGGCCACCGGAGCTACTTCTTCACTCTCCTCACACCCCATTCTCCACCCCCTTTTCCCCTCAATTTCATCTCATTCTTCGATTCGATTCCCACAACCTCTGTTTCTCGATCGCTTTCTCCATCTCTTACCGTTTTCCGGCGCCTCTTTGCTCTTCTTTTCCACCCTTCGCCGCCGAGGTTCGTTTTTCGTTTTTTCCGTTTCTGGAATGGATTCCTTTCGAGTTGTTTTTGGGTTTGGGCACTGCCTTCCCCTTCCGGCCCCGGGGTTTTCAGTTCTGTGATTTTGATTGGTGTGTTTAGGGTTTCTTGCTTCCAGTCCTGTGGGTTTTGTTGCTCGAGCTGAATTGGGTGCTTTGAATTTTGCTTTGGTTTCTGGGCTTTTGGGTTCTCGTAGAATTTTGAGAGGAGGCGTTTTTTGAGGGATTGGAATTGGGGTTCTTCTGAAATTGTGTGTCCTGCTTGTTTCATTCTTGTGTTTGAGTTTAGATGGGGTTCTTGTTTTCGTTTGGACGAGAATGGTTTTAGCATGCTCAATATAGGATTGGGCTAATTTCTGTTTTGTCTTCCCAGTTCAATTCTTTTTAAATTTTTAACCAGTGGTTCTCTTAGGTAATGGTTTTTAGATAGATTGTACGACTCAAGTTTTCTTGTGTATAGTATTGGTTATGTGCATGATTTGCTGAAAAACTCACCAAATGTTCGAATTGGGCTAGAGGTTTCTTGATCTTAGAATTGTTCTAGCTCAATTACTCCTCCAAGTTCTATATAAATTTATTTTCTCTTTCTGAATCATTAAGTGATAACACACCATACATGTAACTATGTAGCTCCGTTATATTGTCTGTTCTATGAGTTTGTCTAATGGAGTTATGCACGTCTATGCTTTATTTCCTTGTTTGATAAGTACTTAGGAAAGCCCAAAAAGTGGTTTGTGTTGTTTTTTTTTTTTATCATTCGATAGGATAGAGGAAAATTACGTTGATTGTCTTGGAGTTGTAATTTCACTACCCTTTTGGTTTTTATGATTGCAGTTATAATGTGACATTGTTCCAAGGAAGTGTGATACATGGAATCTGAAGATAAGAAGTTTGGCCAAGGTAAATGCTGATGTATTCAATTTAGTTCCCTCTCTCTCGTGCACTGACGTAGTTTGACTATACATTGATGTGGTTCGTTGAGCTAGAGTATCTCATTCTATATAATTTTCCTAAGACATGCAGAAGCGTTAGGATTTCAGGGTCGAAACACACAGTAAAAGAAAGTTTTGCTTGATCTGGAATTGTAGTAGGAAATTTGTAGCTCAAATTTAGAGCTGATTTTAAAACACTCGAGCCTTCGGAAGAGGGGTTTCCTTTAGTAAAGGCTCAAGGGTTTGCCTATACTTTTTGGTGCTTTTATTATCTATGTACAAGATTTTAAAAGCAAATCAGGCCATATTATAATGCTTGGATTTGGAAATCTTAAATTTTGATTTTTTGGAGGGGTTATTAGATCTCTGATACTTTTGGCTACCGTTTTATCCTTGCATTTCATAGAGATAGCATAATGGAGTTTGACCCATGAGAACCACCAGACTTCCCTTACCATACAAATCATTATGCTCTTCTTGTTTTGATAATGTAGGAGCAACTTAGGAAGTTATTTAACTTCCTACATTGCCATTTCCCCTAAAACATCAAATTAAATGCCACAGGAGTTATTGATTTCCCATAAGCCTCACAACAAGTTCTGGAAAAAATCCTTGCAAAAGTTCTTATTGAAAGGTTGAAAAAATTCCTACCTGATATGATTAGATTCTTACTTCCAATTGAACTTTTGTAGCTGAAAGACAAATCATAGGTCCTGTTTCAATTGCAAATAAAGCTATTGGTTGAGTGGAGGATATCGTGAAAAGTTGTAGTACATGATATATCTGTTTTCCGTTCCATTTTGTTCATCTTCGATCTGTATTGATTATCTGCCACCTAAGTTTTTCTATGTATTTTTATTTGTGCCTTTAGGACCTAGGGAACTGACTGGTGCTGTGGATCTTATAAGTCACTACAAGCTGTTACCTCATCATGAGTTTTTCTGCAAGAAGTCACTTCCATTGTCAATTTCAGACACACATTATCTTCATAACGTGGTTGGGGACACAGAAATTAGAAAAGGGGAAGGGATGCAATTGAATCAACTCATACAGAATCCTTCTTACCCTAGAGAGACTAATGCTCGTATACAGCCATTTGACCAAGATATTCTCATAGAAGCCTTCCAACTGAGGGAAACTGGTCCTGTTGAGCTGCCTCCTGTAAGAAATCTATAACTATAATTGTTAAAATGAGCCATTTTCTTTAGCTTTCTTCCGTCAGCTGGAACTTTGATGTTAGGCTTGATTATCAGCATTTCTAGTCCTAGTTATTTTCTCTGCAAGTGATGGTCCATTTCTTTTTCTTTGGTTAGGCCGAGAAGGGTGTTCCTACTATTCCAGGGAAGTCAAAAAGCGAGTCCAAAGATAAAGACAGGAAGCATAAAAAGCACAAAGATAGGGATAAGGATAAGGATAGAGAGCATAAGAAGCACAAGCATCGACATAAAGACCGGAGTAAGGATAAAGACAAGGACAAGAAGAAGGACAAAAGTACACATCAAGATTCTGGTGCTGACCATTCAAAGAAGCATCACGAAAAGGTCGGAAAACCTTTATTCTTTTCCAGCTCCTTTGTAAATACCAGGATTAGATAACAATGAAATAGCTCAGGAGTAGATTGTTATTGACGTTAACATTATGGACTTTTTATTTTGTACCAATTTCTTGTTTGTGGTTCCTCACTTCATAAAGCATATCCCTTCCGCTGAATTTTCATCATTTGACATTGATTATCAACCACCAGCATGTCCCGAGGGCAGGGAATTGTAAAGTTAATTTATATGTACCATATTTTCTCTACTAAAAGTTAAGGGTTAAGTAATATTTTTGTGTTTTACTGCCAAACTAATATACATTTATTGTGCATATTGCCCAAACTAGCTGTTTCTTAATTTCTAACTTCATTTAATTTTCAGAAAAGGAAGCATGATGGAGAAGATGATATTAATGACATTCATAGGCACAAAAAAAATAAGGTAATATGAAGTCAAAATTTCTTTTCAGTTCTAGATTACTTGCATACTGCTAAGAACAATCATCGGGTTAACTTTTATCTTTGTAATCCATATTTTTTTTAATTTTTCGATTGATTGTTTTCCAACTAAAAGCCTTCTGCATTTAATTTCTGCAGCATAAGGCCGCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCGGGCTGACATTGTGGAATAATCTAGGTCATTTATTTCCTCATATGGTTGTTGAAAGATTGCTGGAATTTTCACTTAATGTTGTCAAAAAATACTTGAGGTATATTTATATCTTTCAAGTATATTCTATATTCAATTGTTCTTCATATGATTTCATTTCTTTTTCATTAATGGGTTTTTTTTTTATCTTTCATTGATATTTGAAAAAGTTACGTTATAAACTGTTGCTCCCATGGGGGAGCGTACAGAGGAGTATTGACATCCAATCATCACATAACTTAAAAGAGTAAAATGAAACTGAAACTCCAAAAGTCTACAAAAAGACATCTCAACTATAATTGACTGCATCAGGAGTATAACTTTAAAGTGTGAGAGATTCCATGTACTTTTACCTGTTGTGTTGTGGAAATTAAGTCGTTCTTCTCTAGTTTATTTAGGGTTCCTTAGTTAAGTTTGAAGAAAAAAGTTCTTTTTACATTAGGTTTGCATGTGAGCTTTTTCTTTGGTGGAGTATACTGTACTGGAGCTTAAATTTTGGTTGTGAAATTTATGAGCTTGTGGGATAAAAAGAAGGCAGCGCATCAGTGTGTCTGGTTGTTTCAAACAAGGGGAAGATAGTTCGTTGCAAAAGAAAAAAATGGTCCCAAGGAGTAACAAACAATACTATATTCTTAGGCTTTTACAAGCTCAGAGAGACAAGGAAGAAGGTGGAGGGAAGGAAGGACAGTTTTGAACGAAGTGATGGAAAACATATAATTGTTTTTACATGATTTAGTTTCCGTAGGAATTGGATCTTGTATGCTACAGCTAGGGGTGTGCATGGTTCTATTTGGTCCGATTTTGGAAGGAACTGTTGACCGAACCAAGCCCCAGTTTTTGAAATCTTCGAATGGATTAAACCGAAGAATTTCCTTGTTTTGGTTCAAAACTGAACTAGTTTACTTTTTGTTTCCTTGGTTCGGTTTCAGTTTTAGCGGTCTTTTTTGCATTTTTTCCCCCGGTAAATGGCCTTCCGACCCACAAAGAAATGATCCAGAACGAGAGGAAAGGAAGAGGAAAAATGAGTGAGAGGGATGTTTACTAGTAAATATTAAATTTCATTTATGCGTATGATGTTTACTAGTAAATATTAAATTTCATTTATGCGTATGATGTTTACTAGTAAATACCTTGAGGATTTCTGATTCAAAAGAGTCGAGAACAATTGGATATTGTATCGGTTTAACCATCATTACCACGTGTTCAATGGAAAACAATGGGTGTTAGAATTAAAACCTTCTCTAAGATCTCATTTTTTCTTTTGAACTTCTAAATGAGCTTGGTTTTTTTTTAGTGTTTGGGCCATCTTATGTGTATTTCGACTATTTTCATCATCTCCATCATGATTTTATATTTAAATCTATCTATCTATCTATGCATATACTTGGATTCTAGACTTGCTTAAGCCTGCGACTTGAAATTTGTATCGTATTTGTAGTCTTTCTTTGATTCTGAATTTAGAAATATAATCCATTTTCATAGTCTTGGGTGACTTGGGTAGGTATTGTGTGATTGTCTTTCATCATTATTTTCTTTTCTTGCTTGGGTTGGATTGTGTCTGCTGGCCTAAGGATTGATATTCCCTTTTGATGAAACTTGCAACAAATTAGTAAAGAATAAGAGAAAACATACGGCATGCGTATTAGTTGAATACAAAATCAGAGTCAGCATACATTTCATGTATGAGTAGCAATTCCATTGGTACATGTCAGTCATTTTTGTGTTCTGCAATATTTTAGTGATTCTTGACAAGACTTTGCTCAGTTCGAGTTCTCTTTTGAAGCATTTCCGTTCTTTTCTTTTTATTGATTTCGTTTCGTCGTCTGTAACGGTTTGAACTCCTTAATGCCTGTTGTGATTGCCTGAAATATGCCAAGACTAATTGGGTATAACACTCTGATTTAAGTGTTCATGAAAAATTAGTATCTGAAGGAATTTGGAGTCTGCTGGAAGCAGCAGCTAAGCTAATCCTGTCGAGTCGACTTTTATTTGTAGGGAGCTAAAGCCATCTCAGCTGGTTCCATTTGGTACAATGCATGAGTTAGAGATAGTAGTCTAGCTGAACTGAGCTGAGCTGAGCTTTAATTGTTTTGTCTTCTCATATTTTGGTTTTCCTGTAACCTATTGAGTGAATGATAGCCATTGTTCTTTCTTTCTCCGTGCAGAGTAGCTTCTGATGAGGGTGAATTTACCAGTTTTAGGGGAGATATGTGGAAGCAAATGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGGTGGAAATGAACTTTTGTATCATAACAAACAATGGGTCTGATATATAAATATGAGCGATTTGCAGGACTGGTTTCCTCAATTTTCCACATGTAACATTATGTTCTTCTTCTTCTTTTTCTTTTCATTTTCTGGACGTCTTTCGAGTTTTAGTTTGAAGTAGCGTTGCTTCGTGTTCGGTATTTCGAACGGAGGTAGAAGCCTAGAACTTCTCTCTGATCTCTTGTTTTCTTTGTCTGGCCATCTTTTGAGCTAACTGAATTGGTTCCTTAGAGTGT TGACCAAACGTATTAAAAGTCCACTGTACGGTCCATTTGTAGATGTGGCAAAGGGTTATTCGTAGTATTATTCAGTGCCCCCTCTTCTCTTCTCTTCTCTTCCCCGATCTCAATTTCCTCTCTTCCCCTCTCTCTCTCTCTCTCTCCGCTGTTCCCGGCCACCGGAGCTACTTCTTCACTCTCCTCACACCCCATTCTCCACCCCCTTTTCCCCTCAATTTCATCTCATTCTTCGATTCGATTCCCACAACCTCTGTTTCTCGATCGCTTTCTCCATCTCTTACCGTTTTCCGGCGCCTCTTTGCTCTTCTTTTCCACCCTTCGCCGCCGAGTTATAATGTGACATTGTTCCAAGGAAGTGTGATACATGGAATCTGAAGATAAGAAGTTTGGCCAAGGACCTAGGGAACTGACTGGTGCTGTGGATCTTATAAGTCACTACAAGCTGTTACCTCATCATGAGTTTTTCTGCAAGAAGTCACTTCCATTGTCAATTTCAGACACACATTATCTTCATAACGTGGTTGGGGACACAGAAATTAGAAAAGGGGAAGGGATGCAATTGAATCAACTCATACAGAATCCTTCTTACCCTAGAGAGACTAATGCTCGTATACAGCCATTTGACCAAGATATTCTCATAGAAGCCTTCCAACTGAGGGAAACTGGTCCTGTTGAGCTGCCTCCTAAAAGGAAGCATGATGGAGAAGATGATATTAATGACATTCATAGGCACAAAAAAAATAAGCATAAGGCCGCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCGGGCTGACATTGTGGAATAATCTAGGTCATTTATTTCCTCATATGGTTGTTGAAAGATTGCTGGAATTTTCACTTAATGTTGTCAAAAAATACTTGAGGGAGCTAAAGCCATCTCAGCTGGTTCCATTTGGTACAATGCATGAGTTAGAGATAGTAGTCTAGCTGAACTGAGCTGAGCTGAGCTTTAATTGTTTTGTCTTCTCATATTTTGGTTTTCCTGTAACCTATTGAGTGAATGATAGCCATTGTTCTTTCTTTCTCCGTGCAGAGTAGCTTCTGATGAGGGTGAATTTACCAGTTTTAGGGGAGATATGTGGAAGCAAATGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGGTGGAAATGAACTTTTGTATCATAACAAACAATGGGTCTGATATATAAATATGAGCGATTTGCAGGACTGGTTTCCTCAATTTTCCACATGTAACATTATGTTCTTCTTCTTCTTTTTCTTTTCATTTTCTGGACGTCTTTCGAGTTTTAGTTTGAAGTAGCGTTGCTTCGTGTTCGGTATTTCGAACGGAGGTAGAAGCCTAGAACTTCTCTCTGATCTCTTGTTTTCTTTGTCTGGCCATCTTTTGAGCTAACTGAATTGGTTCCTTAGAGTGT ATGGAATCTGAAGATAAGAAGTTTGGCCAAGGACCTAGGGAACTGACTGGTGCTGTGGATCTTATAAGTCACTACAAGCTGTTACCTCATCATGAGTTTTTCTGCAAGAAGTCACTTCCATTGTCAATTTCAGACACACATTATCTTCATAACGTGGTTGGGGACACAGAAATTAGAAAAGGGGAAGGGATGCAATTGAATCAACTCATACAGAATCCTTCTTACCCTAGAGAGACTAATGCTCGTATACAGCCATTTGACCAAGATATTCTCATAGAAGCCTTCCAACTGAGGGAAACTGGTCCTGTTGAGCTGCCTCCTAAAAGGAAGCATGATGGAGAAGATGATATTAATGACATTCATAGGCACAAAAAAAATAAGCATAAGGCCGCAAAAATTGAAGAAATGGGAGTGATAAAGGTAGCGGGCTGA MESEDKKFGQGPRELTGAVDLISHYKLLPHHEFFCKKSLPLSISDTHYLHNVVGDTEIRKGEGMQLNQLIQNPSYPRETNARIQPFDQDILIEAFQLRETGPVELPPKRKHDGEDDINDIHRHKKNKHKAAKIEEMGVIKVAG
BLAST of Cp4.1LG17g05980 vs. Swiss-Prot
Match: MD19B_ARATH (Probable mediator of RNA polymerase II transcription subunit 19b OS=Arabidopsis thaliana GN=MED19B PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.5e-39 Identity = 92/150 (61.33%), Postives = 103/150 (68.67%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. Swiss-Prot
Match: MD19A_ARATH (Mediator of RNA polymerase II transcription subunit 19a OS=Arabidopsis thaliana GN=MED19A PE=1 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 4.3e-39 Identity = 89/151 (58.94%), Postives = 101/151 (66.89%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. TrEMBL
Match: A0A162APC8_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_012709 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-53 Identity = 115/209 (55.02%), Postives = 130/209 (62.20%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. TrEMBL
Match: A0A0A0K716_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G374560 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.2e-53 Identity = 111/151 (73.51%), Postives = 117/151 (77.48%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. TrEMBL
Match: A0A0K9RRB6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_037250 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 2.9e-50 Identity = 112/213 (52.58%), Postives = 130/213 (61.03%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. TrEMBL
Match: A0A164Z5H5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018605 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48 Identity = 107/206 (51.94%), Postives = 127/206 (61.65%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. TrEMBL
Match: A0A0V0IYH3_SOLCH (Putative mediator of RNA polymerase II transcription subunit 19a-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 6.1e-48 Identity = 106/215 (49.30%), Postives = 131/215 (60.93%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. TAIR10
Match: AT5G19480.1 (AT5G19480.1 unknown protein) HSP 1 Score: 163.7 bits (413), Expect = 8.4e-41 Identity = 92/150 (61.33%), Postives = 103/150 (68.67%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. TAIR10
Match: AT5G12230.1 (AT5G12230.1 MED19A) HSP 1 Score: 162.2 bits (409), Expect = 2.4e-40 Identity = 89/151 (58.94%), Postives = 101/151 (66.89%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. NCBI nr
Match: gi|1021046172|gb|KZN03953.1| (hypothetical protein DCAR_012709 [Daucus carota subsp. sativus]) HSP 1 Score: 217.2 bits (552), Expect = 1.8e-53 Identity = 115/209 (55.02%), Postives = 130/209 (62.20%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. NCBI nr
Match: gi|449462429|ref|XP_004148943.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis sativus]) HSP 1 Score: 216.5 bits (550), Expect = 3.1e-53 Identity = 111/151 (73.51%), Postives = 117/151 (77.48%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. NCBI nr
Match: gi|700189481|gb|KGN44714.1| (hypothetical protein Csa_7G374560 [Cucumis sativus]) HSP 1 Score: 216.5 bits (550), Expect = 3.1e-53 Identity = 111/151 (73.51%), Postives = 117/151 (77.48%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. NCBI nr
Match: gi|659092757|ref|XP_008447203.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 19a-like [Cucumis melo]) HSP 1 Score: 216.5 bits (550), Expect = 3.1e-53 Identity = 111/151 (73.51%), Postives = 117/151 (77.48%), Query Frame = 1
BLAST of Cp4.1LG17g05980 vs. NCBI nr
Match: gi|902231010|gb|KNA22080.1| (hypothetical protein SOVF_037250 [Spinacia oleracea]) HSP 1 Score: 206.1 bits (523), Expect = 4.2e-50 Identity = 112/213 (52.58%), Postives = 130/213 (61.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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