Cp4.1LG17g03870 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TNACCGACTCCACATCTTTTTTGTTTATATTTAAAGTCTGTTTGTGGTTGCTTGCTGGGTCGCATCTTGATTTCATTTTAGAAGCATGGTGGATGTTCAAATTGTTTGCTGCATGTGCGGCGACATCGGCTTCCCTGACAAGCTCTTCCGCTGCAACCACTGCCGCACCCGCTTTCAACATTCGTATGTCTCTGCTTTTTCTTTCTTCCATATTCCATGCAATATATCAATCAATTAATTTTGAGTGTTTTGCTTCAAAATCTGGCAGCTATTGCAGTAATTACTACACTGAATTGGGTCGCGCCGACCCAATTCAGGTCTGTGATTGGTGCCGGTGTGAAGGTCGTACTTCCTCCTCCTCCAGATCACATGGAACCTCCTCCAAGAGACCGCCGCCCACCAGTGAGAGAATCAAGCAGCACCATGAAGATGCCTCCTCCTCCGTTGGTGAGAAGGGGAAACACGGCACCGCGGGTGGCGTTCCGTCGCCCAAGCCCACCACACGCAGGTACAAGCTTCTGAAGGACGTAATGTGCTGAAAAAGAGGGCGGTGAATTGGGTTCCTTTAATTTTCTCAAATCTTAAATATTATTATATAGACATCGTATATATAATATATATATATATATATATATATATATATATATATATATATATATATAGTTTATAATATAGGTTGCTTTTGAGTGTGCGTGGGTTTATATGCAGTAGACCACATGAGTTTTGCTTCCTCTTTGTCATCAGTATATTAGTATATAGTATATTAGTATATTATATAAGCAGATATTGTCTTATTTGAGTTGTTTCCAAAATTTTAGAACATGTCTACTAGAATGTTTAGTTTATATGGTGTTATATAGGTTCTTTCCAAAATTTTAAACATGTCTGCTAGAATGTTTCGTTTATATTGTGTTATCCGGGTTCTTTCCAAAATTTTAAAATATGTCTGCTAGAATGTGTGTTATTTGAGTTTTTCTGTTCTGGGTTCTTTCCAAAATTTTAAAACATGTCGGCTAGAGTTTCGTTTAGTTCTCCTCCGAAACGAACGTCAAACGTAGTGATCACTATGAATTTGGGAGAAAAATTATAAAAAGAATGATAATAAAGAAGGCTCAAAGTCAATGAGAAATAATGGAGTGTTTTGTTGTTATTGATTTGTGGCCATTCATTTTA TNACCGACTCCACATCTTTTTTGTTTATATTTAAAGTCTGTTTGTGGTTGCTTGCTGGGTCGCATCTTGATTTCATTTTAGAAGCATGGTGGATGTTCAAATTGTTTGCTGCATGTGCGGCGACATCGGCTTCCCTGACAAGCTCTTCCGCTGCAACCACTGCCGCACCCGCTTTCAACATTCCTATTGCAGTAATTACTACACTGAATTGGGTCGCGCCGACCCAATTCAGGTCTGTGATTGGTGCCGGTGTGAAGGTCGTACTTCCTCCTCCTCCAGATCACATGGAACCTCCTCCAAGAGACCGCCGCCCACCAGTGAGAGAATCAAGCAGCACCATGAAGATGCCTCCTCCTCCGTTGGTGAGAAGGGGAAACACGGCACCGCGGGTGGCGTTCCGTCGCCCAAGCCCACCACACGCAGGTACAAGCTTCTGAAGGACGTAATGTGCTGAAAAAGAGGGCGGTGAATTGGGTTCCTTTAATTTTCTCAAATCTTAAATATTATTATATAGACATCGTATATATAATATATATATATATATATATATATATATATATATATATATATATATATAGTTTATAATATAGGTTGCTTTTGAGTGTGCGTGGGTTTATATGCAGTAGACCACATGAGTTTTGCTTCCTCTTTGTCATCAGTATATTAGTATATAGTATATTAGTATATTATATAAGCAGATATTGTCTTATTTGAGTTGTTTCCAAAATTTTAGAACATGTCTACTAGAATGTTTAGTTTATATGGTGTTATATAGGTTCTTTCCAAAATTTTAAACATGTCTGCTAGAATGTTTCGTTTATATTGTGTTATCCGGGTTCTTTCCAAAATTTTAAAATATGTCTGCTAGAATGTGTGTTATTTGAGTTTTTCTGTTCTGGGTTCTTTCCAAAATTTTAAAACATGTCGGCTAGAGTTTCGTTTAGTTCTCCTCCGAAACGAACGTCAAACGTAGTGATCACTATGAATTTGGGAGAAAAATTATAAAAAGAATGATAATAAAGAAGGCTCAAAGTCAATGAGAAATAATGGAGTGTTTTGTTGTTATTGATTTGTGGCCATTCATTTTA ATGGTGGATGTTCAAATTGTTTGCTGCATGTGCGGCGACATCGGCTTCCCTGACAAGCTCTTCCGCTGCAACCACTGCCGCACCCGCTTTCAACATTCCTATTGCAGTAATTACTACACTGAATTGGGTCGCGCCGACCCAATTCAGGTCTGTGATTGGTGCCGGTGTGAAGGTCGTACTTCCTCCTCCTCCAGATCACATGGAACCTCCTCCAAGAGACCGCCGCCCACCAGTGAGAGAATCAAGCAGCACCATGAAGATGCCTCCTCCTCCGTTGGTGAGAAGGGGAAACACGGCACCGCGGGTGGCGTTCCGTCGCCCAAGCCCACCACACGCAGGTACAAGCTTCTGAAGGACGTAATGTGCTGA MVDVQIVCCMCGDIGFPDKLFRCNHCRTRFQHSYCSNYYTELGRADPIQVCDWCRCEGRTSSSSRSHGTSSKRPPPTSERIKQHHEDASSSVGEKGKHGTAGGVPSPKPTTRRYKLLKDVMC
BLAST of Cp4.1LG17g03870 vs. TrEMBL
Match: A0A0A0KFQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108590 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 4.2e-42 Identity = 89/137 (64.96%), Postives = 101/137 (73.72%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. TrEMBL
Match: W9QSM3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021784 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 3.8e-35 Identity = 81/137 (59.12%), Postives = 95/137 (69.34%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. TrEMBL
Match: A0A067H1B5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033128mg PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 7.3e-34 Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. TrEMBL
Match: V4TE16_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022623mg PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 7.3e-34 Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. TrEMBL
Match: A0A0D2QGP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G175800 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 7.3e-34 Identity = 76/131 (58.02%), Postives = 88/131 (67.18%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. TAIR10
Match: AT1G02070.1 (AT1G02070.1 unknown protein) HSP 1 Score: 131.7 bits (330), Expect = 3.0e-31 Identity = 67/130 (51.54%), Postives = 80/130 (61.54%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. TAIR10
Match: AT3G60520.1 (AT3G60520.1 unknown protein) HSP 1 Score: 128.3 bits (321), Expect = 3.3e-30 Identity = 74/136 (54.41%), Postives = 89/136 (65.44%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. NCBI nr
Match: gi|659134040|ref|XP_008467003.1| (PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]) HSP 1 Score: 181.4 bits (459), Expect = 9.4e-43 Identity = 90/137 (65.69%), Postives = 104/137 (75.91%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. NCBI nr
Match: gi|449445461|ref|XP_004140491.1| (PREDICTED: uncharacterized protein LOC101205257 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 6.1e-42 Identity = 89/137 (64.96%), Postives = 101/137 (73.72%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. NCBI nr
Match: gi|747044635|ref|XP_011090075.1| (PREDICTED: uncharacterized protein LOC105170847 [Sesamum indicum]) HSP 1 Score: 159.8 bits (403), Expect = 2.9e-36 Identity = 81/135 (60.00%), Postives = 92/135 (68.15%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. NCBI nr
Match: gi|703072320|ref|XP_010089254.1| (hypothetical protein L484_021784 [Morus notabilis]) HSP 1 Score: 155.6 bits (392), Expect = 5.5e-35 Identity = 81/137 (59.12%), Postives = 95/137 (69.34%), Query Frame = 1
BLAST of Cp4.1LG17g03870 vs. NCBI nr
Match: gi|641866960|gb|KDO85644.1| (hypothetical protein CISIN_1g033128mg [Citrus sinensis]) HSP 1 Score: 151.4 bits (381), Expect = 1.0e-33 Identity = 76/130 (58.46%), Postives = 92/130 (70.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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