Cp4.1LG12g04160 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g04160
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Potassium voltage-gated channel subfamily C member 4
Location	Cp4.1LG12 : 3142155 .. 3143859 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATGGTTAAAAACGGATTTATACACCGACTTGAAGACACCACCAGTTTTGTTTTATATTTAAGTCATTCTCTTAGCTTTTTCTCTCTCATCATCTTCATCTTCTTCATCTTGGTTGTTCTTGTGTTGTTTGTTGTTGGATATAAATTTAAGAATGGTGGATCTTCAGATCGTTTGCTGCTTGTGCGGCGACGTCGGCTTCCCTGACAAGCTCTTCCGCTGTATCAAGTGCTCCAACCGCTTCCAACACTCGTACTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTNTCTCTCCTTCTTTCTTCCTTCTATGTCACATGCATGTTCTCATCAATTCTAATTAAATTTACCAGTTCAACCTTTTCGGTTCTATCCTAATTTTCTTCATATGGGTATTTCACTCCGATATCGATTTTAGGTTAAGGGCATCATTCTCATATCAATTTTATTCGGATGGTTAAGTCGAGGGAATGACTATGATATTGATTTTATTGATATAGCTAAGTTAAATGCATGATTTTAATACTATTTGAGGGTATGATATTGTCTAATTTGAGTATGAACTTTCGTAGTTTTGCTTTTGATCTTCTCCAAACACTTAATAATGTAGGTGGTATCATTTATGTGATCGGTTGAAAATAAGAACAAAACCTTCTTTATAAGGGTGTGTAAATCTCTACTATCAGCATTTTAAAAATCTTTGAGAGAAACCCCAAAATGGAAATCCAAAAATAACAAAATATTTGTTAGTGGTGGGCTTGTTGCTGTTACAAATGGTAGAAAACGGAAAAGGGAAATCCAAAAAATGACAATATTTGTTAGTGGTGGGCTTGGGGCTGTTACAAATGGAATGAGAACCAAATACTGGAGGTGTGTCAGTGAGGAGACTGAGTCTTAAAGTAGGTGAATACGAAGCAGTGTGTCAGCAAAGATGCTGGGCCTCTGGGGTCCTACATCAACGGGAGAAGGGGACCATGTGTGTCCTTGAATGAGGTAGATTGTTCGATCCCACCTTAGTGGGTAGGAGAACAAAACATTTTTTACCAGACACGACCAGAGAGGATAATTATATTAATTTGTGGTAGATTAGTAAAAAGATTAAGAGGGTATTAGAGAAATTAATTTAATTTTGTTTTAAGAATAAAAATAAAAAGTATTTGGTTAAAAATCCGCAGGTACTGCAGCAATTACTATAGCGAATCGGCGGAGCCAATTGAGGTGTGTGATTGGTGCCAGTGTGAAGGCCGGAGCTCCTCCAGATCACACGGAACCTCCTCCAGAAGACCGCCACCAACCGCTACCCAACCCGCCGGAATCATGAGCCGCTCCGTTTACTCCGGCGACAAAATCAAACACCATCATGAAGATGCCGCCGCCGCCACCGTCGACAAGGGCAAACAAGGCGCCGCCGGCAGCGTCCCATCGCCGAGGCCGACCACGCGGAGGTATAAGCTTCTCAAGGACGTAATGTGCTGATAAAACGCAGCGTTTCGATATGCCCGAACAGGGTTGGTTTTATTTTCTCTCTTTTTTTTCTCAAATGTTAATTATTAATAAATAATAATATTATTATTATTATGTAAGAAAAAACGTATATATATATATATATATATAATATAGTTTGCTTTTGTGTGCGCGTGGGTTTCTCTGTAGACTCCATGAATTTTGGTTGATTTTTAAATAAATAATGTAA

mRNA sequence

TTATGGTTAAAAACGGATTTATACACCGACTTGAAGACACCACCAGTTTTGTTTTATATTTAAGTCATTCTCTTAGCTTTTTCTCTCTCATCATCTTCATCTTCTTCATCTTGGTTGTTCTTGTGTTGTTTGTTGTTGGATATAAATTTAAGAATGGTGGATCTTCAGATCGTTTGCTGCTTGTGCGGCGACGTCGGCTTCCCTGACAAGCTCTTCCGCTGTATCAAGTGCTCCAACCGCTTCCAACACTCGTACTGCAGCAATTACTATAGCGAATCGGCGGAGCCAATTGAGGTGTGTGATTGGTGCCAGTGTGAAGGCCGGAGCTCCTCCAGATCACACGGAACCTCCTCCAGAAGACCGCCACCAACCGCTACCCAACCCGCCGGAATCATGAGCCGCTCCGTTTACTCCGGCGACAAAATCAAACACCATCATGAAGATGCCGCCGCCGCCACCGTCGACAAGGGCAAACAAGGCGCCGCCGGCAGCGTCCCATCGCCGAGGCCGACCACGCGGAGGTATAAGCTTCTCAAGGACGTAATGTGCTGATAAAACGCAGCGTTTCGATATGCCCGAACAGGGTTGGTTTTATTTTCTCTCTTTTTTTTCTCAAATGTTAATTATTAATAAATAATAATATTATTATTATTATGTAAGAAAAAACGTATATATATATATATATATATAATATAGTTTGCTTTTGTGTGCGCGTGGGTTTCTCTGTAGACTCCATGAATTTTGGTTGATTTTTAAATAAATAATGTAA

Coding sequence (CDS)

ATGGTGGATCTTCAGATCGTTTGCTGCTTGTGCGGCGACGTCGGCTTCCCTGACAAGCTCTTCCGCTGTATCAAGTGCTCCAACCGCTTCCAACACTCGTACTGCAGCAATTACTATAGCGAATCGGCGGAGCCAATTGAGGTGTGTGATTGGTGCCAGTGTGAAGGCCGGAGCTCCTCCAGATCACACGGAACCTCCTCCAGAAGACCGCCACCAACCGCTACCCAACCCGCCGGAATCATGAGCCGCTCCGTTTACTCCGGCGACAAAATCAAACACCATCATGAAGATGCCGCCGCCGCCACCGTCGACAAGGGCAAACAAGGCGCCGCCGGCAGCGTCCCATCGCCGAGGCCGACCACGCGGAGGTATAAGCTTCTCAAGGACGTAATGTGCTGA

Protein sequence

MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSSRSHGTSSRRPPPTATQPAGIMSRSVYSGDKIKHHHEDAAAATVDKGKQGAAGSVPSPRPTTRRYKLLKDVMC

Homology

[Close]

BLAST of Cp4.1LG12g04160 vs. TrEMBL
Match: A0A0A0KFQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108590 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 4.3e-56
Identity = 106/133 (79.70%), Postives = 113/133 (84.96%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  RSHGTSSRRPPPTATQPAGIMSRSVYSGDK-IKHHHEDAAAATVDKGKQGAAGSVPSPRP 120
           RSHG+SSRRPP T T   GIM+RS YSGDK IKHHH D   +  +KGK G AGS  SPRP
Sbjct: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD---SPTEKGKHGGAGSTSSPRP 120

Query: 121 TTRRYKLLKDVMC 133
           TTRRYKLLKDVMC
Sbjct: 121 TTRRYKLLKDVMC 130

[Close]

BLAST of Cp4.1LG12g04160 vs. TrEMBL
Match: W9QSM3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021784 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-41
Identity = 89/134 (66.42%), Postives = 101/134 (75.37%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60
           MVDLQ VCC+CGDVGFPDKLFRC KC +RFQHSYCSNYYSE AEP++VCDWCQ EG+ SS
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFRCNKCRHRFQHSYCSNYYSEYAEPVQVCDWCQSEGKLSS 60

Query: 61  RSHGTSSRRPPPTATQPAGIMSRSVYSGDKIKHH--HEDAAAATVDKGKQGAAGSVPSPR 120
           R HG+SS++   T    +G+ +RS YSGDKIK H   ED   +   KGK       PSPR
Sbjct: 61  R-HGSSSKK-SVTVGGESGVSNRSEYSGDKIKQHVDREDGGGSGDQKGKN--PSGAPSPR 120

Query: 121 PTTRRYKLLKDVMC 133
           PTTRRYKLLKDVMC
Sbjct: 121 PTTRRYKLLKDVMC 130

[Close]

BLAST of Cp4.1LG12g04160 vs. TrEMBL
Match: A0A0D2T417_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G107200 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.3e-40
Identity = 83/132 (62.88%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60
           MVD Q VCC+CGDVGF DK+FRC KC +RFQHSYCSNYYSE AEPIE+CDWC+ E R+S 
Sbjct: 1   MVDYQTVCCMCGDVGFSDKIFRCNKCRHRFQHSYCSNYYSEFAEPIELCDWCRSEERNS- 60

Query: 61  RSHGTSSRRPPPTATQPAGIMSRSVYSGDKIKHHHEDAAAATVDKGKQGAAGSVPSPRPT 120
             HG+ S++ P       GI++RS YSGDKIK H++D       +GK    G  PSPRPT
Sbjct: 61  -KHGSFSKKSPLMNRNETGIVNRSEYSGDKIKQHNDDHQHEHHHRGKN---GGTPSPRPT 120

Query: 121 TRRYKLLKDVMC 133
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 127

[Close]

BLAST of Cp4.1LG12g04160 vs. TrEMBL
Match: A0A0D2R5X2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G164800 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39
Identity = 84/132 (63.64%), Postives = 99/132 (75.00%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60
           MVDLQ VCC+CGDVGFPDKLFRC KC +RFQHSYCSNYYSE AEPIE+CDWCQ E ++S 
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFRCNKCHHRFQHSYCSNYYSEFAEPIELCDWCQSEAKNSR 60

Query: 61  RSHGTSSRRPPPTATQPAGIMSRSVYSGDKIKHHHEDAAAATVDKGKQGAAGSVPSPRPT 120
           +  G SS++  PT    +GI++RS YSGDKIK    D +       ++G +   PSPRPT
Sbjct: 61  Q--GRSSKK--PTTGNESGIINRSEYSGDKIKQQDRDESG----DHQKGKSSGTPSPRPT 120

Query: 121 TRRYKLLKDVMC 133
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 124

[Close]

BLAST of Cp4.1LG12g04160 vs. TrEMBL
Match: A0A0B0MQZ3_GOSAR (Potassium voltage-gated channel subfamily C member 4 OS=Gossypium arboreum GN=F383_30050 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.8e-39
Identity = 84/132 (63.64%), Postives = 99/132 (75.00%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60
           MVDLQ VCC+CGDVGFPDKLFRC KC +RFQHSYCSNYYSE AEPIE+CDWCQ E ++S 
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFRCNKCRHRFQHSYCSNYYSEFAEPIELCDWCQSEAKNSR 60

Query: 61  RSHGTSSRRPPPTATQPAGIMSRSVYSGDKIKHHHEDAAAATVDKGKQGAAGSVPSPRPT 120
           +  G SS++  PT    +GI++RS YSGDKIK    D +       ++G +   PSPRPT
Sbjct: 61  Q--GRSSKK--PTTGNESGIINRSEYSGDKIKLQDRDESG----DHQKGKSSGTPSPRPT 120

Query: 121 TRRYKLLKDVMC 133
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 124

[Close]

BLAST of Cp4.1LG12g04160 vs. TAIR10
Match: AT3G60520.1 (AT3G60520.1 unknown protein)

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-32
Identity = 73/145 (50.34%), Postives = 86/145 (59.31%), Query Frame = 1


Query: 1   MVDLQI-VCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS- 60
           MVDL+  VCC+CGDVGF DKLF C KC NRFQHSYCS+YY E A+PI++CDWCQCE +S 
Sbjct: 1   MVDLERRVCCMCGDVGFFDKLFHCSKCLNRFQHSYCSSYYKEQADPIKICDWCQCEAKSR 60

Query: 61  SSRSHGTSSRRPPPTATQPAGIMSRSVYSGDKIKHHHE-----------DAAAATVDKGK 120
           +   HG +            G  S+  Y  +    HH+            +     DKGK
Sbjct: 61  TGAKHGVN------------GGSSKRSYRSEYSSPHHQIKQQEINQTTSSSIPPAADKGK 120

Query: 121 QGAAGSVPSPRPTTRRYKLLKDVMC 133
            G    VPSPRP TRRYKLLKDVMC
Sbjct: 121 TG----VPSPRPATRRYKLLKDVMC 129

[Close]

BLAST of Cp4.1LG12g04160 vs. TAIR10
Match: AT1G02070.1 (AT1G02070.1 unknown protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.5e-31
Identity = 69/133 (51.88%), Postives = 85/133 (63.91%), Query Frame = 1


Query: 4   LQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS--- 63
           ++ VCC+CGDVGF DKLF C  C  RFQHSYCSNYY + AEP E+CDWC+ + R  S   
Sbjct: 1   MERVCCMCGDVGFSDKLFSCGHCRCRFQHSYCSNYYGQFAEPTEICDWCRSDDRKLSNVA 60

Query: 64  RSHGTSSRRPPPTATQPAGIMSRSVYS-GDKIKHHHEDAAAATVDKGKQGAAGSVPSPRP 123
           R  G+SS++P  +        +RS YS G +IKH++       V KG  G  G V SP+ 
Sbjct: 61  RHGGSSSKKPSSSVKYENDFSNRSEYSPGHRIKHNNN--RHDQVAKGVAGDGGGVTSPKT 120

Query: 124 TTRRYKLLKDVMC 133
            TRRYKLLKDVMC
Sbjct: 121 ATRRYKLLKDVMC 131

[Close]

BLAST of Cp4.1LG12g04160 vs. NCBI nr
Match: gi|449445461|ref|XP_004140491.1| (PREDICTED: uncharacterized protein LOC101205257 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 6.1e-56
Identity = 106/133 (79.70%), Postives = 113/133 (84.96%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS+S
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  RSHGTSSRRPPPTATQPAGIMSRSVYSGDK-IKHHHEDAAAATVDKGKQGAAGSVPSPRP 120
           RSHG+SSRRPP T T   GIM+RS YSGDK IKHHH D   +  +KGK G AGS  SPRP
Sbjct: 61  RSHGSSSRRPPSTGTNATGIMTRSEYSGDKLIKHHHHD---SPTEKGKHGGAGSTSSPRP 120

Query: 121 TTRRYKLLKDVMC 133
           TTRRYKLLKDVMC
Sbjct: 121 TTRRYKLLKDVMC 130

[Close]

BLAST of Cp4.1LG12g04160 vs. NCBI nr
Match: gi|659134040|ref|XP_008467003.1| (PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 2.6e-54
Identity = 108/135 (80.00%), Postives = 114/135 (84.44%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRS-S 60
           MVDLQIVCC+CGD+GFPDKLF C KC NRFQHSYCSNYYSESAEPIEVCDWCQCEGRS S
Sbjct: 1   MVDLQIVCCMCGDIGFPDKLFHCNKCRNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSTS 60

Query: 61  SRSHG-TSSRRPPPTATQPAGIMSRSVYSGDK-IKHHHEDAAAATVDKGKQGAAGSVPSP 120
           SRSHG +SSRRPP T T   GIMSRS YS DK IKHHH+D   +  +KGK G AGS PSP
Sbjct: 61  SRSHGSSSSRRPPSTGTNATGIMSRSEYSSDKLIKHHHDD---SPTEKGKHGGAGSTPSP 120

Query: 121 RPTTRRYKLLKDVMC 133
           RPTTRRYKLLKDVMC
Sbjct: 121 RPTTRRYKLLKDVMC 132

[Close]

BLAST of Cp4.1LG12g04160 vs. NCBI nr
Match: gi|747044635|ref|XP_011090075.1| (PREDICTED: uncharacterized protein LOC105170847 [Sesamum indicum])

HSP 1 Score: 183.0 bits (463), Expect = 3.5e-43
Identity = 87/132 (65.91%), Postives = 98/132 (74.24%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60
           MVD+Q VCC+CGDVGFPDKLFRC KC NRFQHSYCSNYYSE A+PI+VCDWCQCE R+SS
Sbjct: 1   MVDIQTVCCMCGDVGFPDKLFRCSKCRNRFQHSYCSNYYSEHAQPIQVCDWCQCEERNSS 60

Query: 61  RSHGTSSRRPPPTATQPAGIMSRSVYSGDKIKHHHEDAAAATVDKGKQGAAGSVPSPRPT 120
             HG SSR      +  A  + RS YSGDKIK HH +  ++  +K      G  PSPRPT
Sbjct: 61  SRHGISSRNNNNNRSAHANEV-RSAYSGDKIKQHHREEGSSAAEK----PTGKTPSPRPT 120

Query: 121 TRRYKLLKDVMC 133
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 127

[Close]

BLAST of Cp4.1LG12g04160 vs. NCBI nr
Match: gi|703072320|ref|XP_010089254.1| (hypothetical protein L484_021784 [Morus notabilis])

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-41
Identity = 89/134 (66.42%), Postives = 101/134 (75.37%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60
           MVDLQ VCC+CGDVGFPDKLFRC KC +RFQHSYCSNYYSE AEP++VCDWCQ EG+ SS
Sbjct: 1   MVDLQTVCCMCGDVGFPDKLFRCNKCRHRFQHSYCSNYYSEYAEPVQVCDWCQSEGKLSS 60

Query: 61  RSHGTSSRRPPPTATQPAGIMSRSVYSGDKIKHH--HEDAAAATVDKGKQGAAGSVPSPR 120
           R HG+SS++   T    +G+ +RS YSGDKIK H   ED   +   KGK       PSPR
Sbjct: 61  R-HGSSSKK-SVTVGGESGVSNRSEYSGDKIKQHVDREDGGGSGDQKGKN--PSGAPSPR 120

Query: 121 PTTRRYKLLKDVMC 133
           PTTRRYKLLKDVMC
Sbjct: 121 PTTRRYKLLKDVMC 130

[Close]

BLAST of Cp4.1LG12g04160 vs. NCBI nr
Match: gi|823208044|ref|XP_012437521.1| (PREDICTED: uncharacterized protein LOC105763733 isoform X2 [Gossypium raimondii])

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39
Identity = 83/132 (62.88%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 1   MVDLQIVCCLCGDVGFPDKLFRCIKCSNRFQHSYCSNYYSESAEPIEVCDWCQCEGRSSS 60
           MVD Q VCC+CGDVGF DK+FRC KC +RFQHSYCSNYYSE AEPIE+CDWC+ E R+S 
Sbjct: 1   MVDYQTVCCMCGDVGFSDKIFRCNKCRHRFQHSYCSNYYSEFAEPIELCDWCRSEERNS- 60

Query: 61  RSHGTSSRRPPPTATQPAGIMSRSVYSGDKIKHHHEDAAAATVDKGKQGAAGSVPSPRPT 120
             HG+ S++ P       GI++RS YSGDKIK H++D       +GK    G  PSPRPT
Sbjct: 61  -KHGSFSKKSPLMNRNETGIVNRSEYSGDKIKQHNDDHQHEHHHRGKN---GGTPSPRPT 120

Query: 121 TRRYKLLKDVMC 133
           TRRYKLLKDVMC
Sbjct: 121 TRRYKLLKDVMC 127

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g04160 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g04160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFQ0_CUCSA	4.3e-56	79.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108590 PE=4 SV=1	[more]
W9QSM3_9ROSA	1.3e-41	66.42	Uncharacterized protein OS=Morus notabilis GN=L484_021784 PE=4 SV=1	[more]
A0A0D2T417_GOSRA	7.3e-40	62.88	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G107200 PE=4 SV=1	[more]
A0A0D2R5X2_GOSRA	1.3e-39	63.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G164800 PE=4 SV=1	[more]
A0A0B0MQZ3_GOSAR	2.8e-39	63.64	Potassium voltage-gated channel subfamily C member 4 OS=Gossypium arboreum GN=F3...	[more]

BLAST of Cp4.1LG12g04160 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60520.1	1.3e-32	50.34	unknown protein	[more]
AT1G02070.1	1.5e-31	51.88	unknown protein	[more]

BLAST of Cp4.1LG12g04160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445461\|ref\|XP_004140491.1\|	6.1e-56	79.70	PREDICTED: uncharacterized protein LOC101205257 [Cucumis sativus]	[more]
gi\|659134040\|ref\|XP_008467003.1\|	2.6e-54	80.00	PREDICTED: uncharacterized protein LOC103504413 [Cucumis melo]	[more]
gi\|747044635\|ref\|XP_011090075.1\|	3.5e-43	65.91	PREDICTED: uncharacterized protein LOC105170847 [Sesamum indicum]	[more]
gi\|703072320\|ref\|XP_010089254.1\|	1.9e-41	66.42	hypothetical protein L484_021784 [Morus notabilis]	[more]
gi\|823208044\|ref\|XP_012437521.1\|	1.1e-39	62.88	PREDICTED: uncharacterized protein LOC105763733 isoform X2 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g04160.1	Cp4.1LG12g04160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33779	FAMILY NOT NAMED	coord: 1..132 score: 2.6
None	No IPR available	PANTHER	PTHR33779:SF2	SUBFAMILY NOT NAMED	coord: 1..132 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g04160	Cucsa.120640	Cucumber (Gy14) v1	cgycpeB0286
Cp4.1LG12g04160	CmaCh17G004910	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g04160	CmaCh08G008610	Cucurbita maxima (Rimu)	cmacpeB904
Cp4.1LG12g04160	CmoCh17G004630	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g04160	CmoCh08G008300	Cucurbita moschata (Rifu)	cmocpeB840
Cp4.1LG12g04160	Csa6G108590	Cucumber (Chinese Long) v2	cpecuB152
Cp4.1LG12g04160	ClCG06G002990	Watermelon (Charleston Gray)	cpewcgB144
Cp4.1LG12g04160	CSPI06G08740	Wild cucumber (PI 183967)	cpecpiB154
Cp4.1LG12g04160	Lsi09G016320	Bottle gourd (USVL1VR-Ls)	cpelsiB101
Cp4.1LG12g04160	CsaV3_6G009110	Cucumber (Chinese Long) v3	cpecucB0176
Cp4.1LG12g04160	Bhi12G001916	Wax gourd	cpewgoB0174
Cp4.1LG12g04160	CsGy6G008840	Cucumber (Gy14) v2	cgybcpeB732
Cp4.1LG12g04160	Carg26662	Silver-seed gourd	carcpeB1250
Cp4.1LG12g04160	Carg13871	Silver-seed gourd	carcpeB0850

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g04160	Cp4.1LG17g03870	Cucurbita pepo (Zucchini)	cpecpeB159

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g04160	Watermelon (97103) v1	cpewmB155
Cp4.1LG12g04160	Melon (DHL92) v3.5.1	cpemeB112
Cp4.1LG12g04160	Melon (DHL92) v3.6.1	cpemedB138