Cp4.1LG14g02440 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTTTCCAGGACGTCTTTTGGATTTGTTGCTGCGGCTGCGCTCATCTTTGCTATTTTCTTGCCGGTTGCTCAGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCACCAGCGACGGTTAGTTCTCTTCTTAATTTCTATTTCTCTAAGTTTTGTTTTGTATTTTTGTTCTAGATCTGTGTGGACTGTTGATCTCTGGCTTGAAATGAGTTTTGTTTGTTTATTCTTTGTTTCCGGATTATTTTGAGAGTTTCAGTTTCTGAGTTACCAAAACATTGTTTCGGTTTCCGTTTCTTGATGAATTGTGATTAAAGATATTAAGCGCAAATCTTCACTTCTTTTCCCCTTTAGTTTTGATTGTTTGTTCAAGCCTTGGTGGATCTATTTTCCTACACGTATTTGTATTCTCAATTTTGCGAGAGGTCATTGGCATCAATTTGTGGACCAAATGTTAGAAATGACAAATAATACAGAAGCTATTTTCTTGTATTCGTAACAACAGCATAAAGTTATCTTATAGTTTCTATAAACTATTAATTTGCGAGTGTAATTAAACCTATTGCCATGATTATGCAAAGTAATTCTGTTTGCTATTTGGTTGGCCTGACTACTATTACGTTACCTTTTAGAACAAAGGTGTTTGGTCTTGATGTCTTATCCTCAGAAGTTCATTTTAAATAGTTCTTTGAAATGCAAAATCCTAAGGAATTAGGGTTGAAATTCATAGATTTCTTAGTGAACTTAATTGGTATCTTTAAAACGTCATTTCACAGGGACATCCATAGACCAAGGGATAGCTTATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAACGCTGACTTATCCAACAGCTTCTAA ATGGCGGTTTCCAGGACGTCTTTTGGATTTGTTGCTGCGGCTGCGCTCATCTTTGCTATTTTCTTGCCGGTTGCTCAGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCACCAGCGACGGGACATCCATAGACCAAGGGATAGCTTATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAACGCTGACTTATCCAACAGCTTCTAA ATGGCGGTTTCCAGGACGTCTTTTGGATTTGTTGCTGCGGCTGCGCTCATCTTTGCTATTTTCTTGCCGGTTGCTCAGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCACCAGCGACGGGACATCCATAGACCAAGGGATAGCTTATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAACGCTGACTTATCCAACAGCTTCTAA MAVSRTSFGFVAAAALIFAIFLPVAQPQSLAPAPAPTSDGTSIDQGIAYVLMLVALALTYLIHNADLSNSF
BLAST of Cp4.1LG14g02440 vs. Swiss-Prot
Match: AGP20_ARATH (Arabinogalactan peptide 20 OS=Arabidopsis thaliana GN=AGP20 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 9.7e-16 Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. Swiss-Prot
Match: AGP16_ARATH (Arabinogalactan peptide 16 OS=Arabidopsis thaliana GN=AGP16 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 4.8e-15 Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. Swiss-Prot
Match: AGP22_ARATH (Arabinogalactan peptide 22 OS=Arabidopsis thaliana GN=AGP22 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-12 Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. TrEMBL
Match: A0A0A0KZS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051380 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 9.8e-23 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. TrEMBL
Match: A0A067JZA6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20491 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 8.0e-17 Identity = 53/67 (79.10%), Postives = 56/67 (83.58%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. TrEMBL
Match: A0A087GCU3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G416500 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 7.5e-15 Identity = 44/63 (69.84%), Postives = 53/63 (84.13%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. TrEMBL
Match: A9PA79_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s13640g PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 7.5e-15 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. TrEMBL
Match: W9RQA8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012077 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 9.8e-15 Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. TAIR10
Match: AT3G61640.1 (AT3G61640.1 arabinogalactan protein 20) HSP 1 Score: 83.6 bits (205), Expect = 5.5e-17 Identity = 44/67 (65.67%), Postives = 51/67 (76.12%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. TAIR10
Match: AT5G24105.1 (AT5G24105.1 arabinogalactan protein 41) HSP 1 Score: 83.2 bits (204), Expect = 7.2e-17 Identity = 45/63 (71.43%), Postives = 50/63 (79.37%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. TAIR10
Match: AT2G46330.1 (AT2G46330.1 arabinogalactan protein 16) HSP 1 Score: 81.3 bits (199), Expect = 2.7e-16 Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. TAIR10
Match: AT5G53250.1 (AT5G53250.1 arabinogalactan protein 22) HSP 1 Score: 73.2 bits (178), Expect = 7.4e-14 Identity = 40/63 (63.49%), Postives = 46/63 (73.02%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. NCBI nr
Match: gi|659102138|ref|XP_008451971.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]) HSP 1 Score: 114.4 bits (285), Expect = 8.2e-23 Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. NCBI nr
Match: gi|449464078|ref|XP_004149756.1| (PREDICTED: arabinogalactan peptide 22-like [Cucumis sativus]) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-22 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. NCBI nr
Match: gi|720033434|ref|XP_010266430.1| (PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera]) HSP 1 Score: 99.8 bits (247), Expect = 2.1e-18 Identity = 54/69 (78.26%), Postives = 57/69 (82.61%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. NCBI nr
Match: gi|720017497|ref|XP_010261486.1| (PREDICTED: arabinogalactan peptide 20-like [Nelumbo nucifera]) HSP 1 Score: 97.1 bits (240), Expect = 1.4e-17 Identity = 52/69 (75.36%), Postives = 56/69 (81.16%), Query Frame = 1
BLAST of Cp4.1LG14g02440 vs. NCBI nr
Match: gi|802735165|ref|XP_012086771.1| (PREDICTED: arabinogalactan peptide 20-like [Jatropha curcas]) HSP 1 Score: 94.0 bits (232), Expect = 1.1e-16 Identity = 53/67 (79.10%), Postives = 56/67 (83.58%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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