Cp4.1LG07g09690 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTAGGAGCAGCAGCAACCCCTTAGCCCATCTGGTTGCCTCAATAAAGTTAAAATTTGCATACACATTCAAACAAACTTTGGATTTTCTCTTTCATTATCGCTCACGTGACACCTTTCCCTTGCTCTGTGAGGGAGAGAAGTGGCATCTTTGGCCACAAACAAAGCCAAAACGGCTGCCCCAAAGCTCCTTTTCTCTCTGCTCTGCTACCTCTCTCATAATGCATTTTCTGTTTGTGTAATTTGCAGAAGCTCTGCTACCTTCCTCTGTCACTATCACCGTCCAAACCCCCTCTCCCTTCCCTCTCTGTTTCAAAACCCCAAAGAAGAAGAGAAGAAAATCAGCTGTTTCTTTGAAAACCCATCATTCATTTCTCTCAAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATCCCAACAACGTCACTACTGATCATATTCAACAGGTTCTTCTTCTTTTTCTTCCTTTTTTTCACTTTTTTCATCTGGGTTTTCCTTGTTCTTCATGATTTTTATTCTCTTTCATGTGGGTTTTCCTTGTTTTTCATGTTTGAGATGATTCGTAAGAGGTTCTTCTTCTTCTTCTTCCAATGTTTTGATTTCTTTCATGTGGGGTTTCCTTGTTTTTTATGTTAGAGATGATTCATAATATGTTCTTCATCTTCTTCCATTTTTTATGATCTCTTTCATGTGGGTTTTCCTTGTTCTTCATGTTAGATATGATTCGTAACTTGTTTTTCATTCTTTTAATCTCTTTCATGTGGGTTTTCCTTGTTTTTCATGTTAGAAATGATTCATAACATGTTCTTCTTCATCTTCATCTTCCATTTTTTTTGATCTTTTTCATCTGGGTTTTCCTTGTTCTTCATGTTAGAGATGATTCATAACTTATTTATTCATTCTTTTAATCTCTTTCATATGGGTTTTCCTTGTTCTTCATGTTAGAGATGATTCATAAGAATGTCTTGCTTCCTTTATCCTATTGGGTTTAATTGTTGCCTTTTTCACGTGCTCTTGTCTCTATTGACTGATTTTAATATCTAATACCAAAAGGTGAGACCAGTCCATCAATGGCTTTTCTCTTGTTTATTTCCATCTCTTTTCCTGATTAAGTATTTGTTTCCATATTGGTCAAAGCTTAATTACTTTTAATCTTTCAATTCCATGATTGACTTCTGAACCCTTTTGGCCTTAATCTTAATGGGAAAAGGAATCAGAACTGGTTGGATGGTGCATTTTTTTTCCCTTTTCTTCTCTCTTTCTCTGTTCATCAAGTGGGGCAAAAAGTGGCTCATGAAACTGTTGAGAGCTTGAGCTTTTGAGGACTATAAGGTTAATTTAAGGTTTTGGATTTTATGTTCTTTCATGTTGGTCTAAACTTGTTGTAAATGAATGTACCATATAAAAGTTCTTAACTAAGATTTATGTTTTTGGTAAAAGGGTTTCTTTAGAAAGAAAATAATAGCTTTTCTTTGGACTATGAATGTGATATCAGCTTCATTAATTACTAGAAATCTTGATTCAAATTGTTTCGTGAGATCCCACATCGGTTGGGGAGGAGAACCAAACACCCTTTATAAGGGTATGAAAACCTCTCCCAAGCAAACACGTAGTAAAGTTCAAAAAGAAAAACCCAAAGAGGATAATACTTGCTAGTCGTGGGCTTGGGCCGTTACAAATGGTATCAGAGTTAGACACCGGGCGACGTGCCAACGAGGAGGCTGTTCCCCGAAAGGGGTTAGACACGAGGCGGTGTGCCAGTAAGAACACTGGCCCCAAATGGGGGTGGATTAGGGTCCCAAATCGATTGGATGAAGGAACGAGTTCTAGCGAGGACGTTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAACACCCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGGAAGTCCTGGATTGTGAGATCCCACATCGGTTGGGAGGAGGAGGTGCGGAAACCTCTCCCTAGTAGACGCGTTTTAAAATCCTTGAGGGAAGTCAAAAGGACTGCCGATAGCGGTGGGCTTGGGCCGTTACATTATTCTTTTAGTTTATGAACTTCTTTGATGAGGTTTCTTAAGAAAATTATTCATGAATTTTGGCCGGAGTTCATATAATCTCACTGGAATTGGCCAAGATTCAAGTGATTTTTTGGTATTTTTTAACAGTTTTGTGATGAACTATAATGAGGATAATGTTAAAACAGTCTACATCAGTAGAGAAGTAAAAAGTGTTTATAATGGAAGACAGAAGAGCTTGAATAGTGATTGGTCAACCATGAAACAGTATTATAAGTTGCTGTCTGGTTCTGTTTGTGTTTCAGCTCATGTTTTTTAAGGTTTATGATGTCTTATTTGATCATCTATGTTGCAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGTAAGTATATGGTTGAATCATTGTGATAAATGTGAATTTTCTTTTTCGGTTTGATCCATTCGGTTCCTAGGATGAAGAAACAGAGTAAGTATATGGGCCTTTCCCTTCTGGGCTTTCCCTTCTGGGCTTCCCCTCAAGGTTTTATAACGCGTCTGCTTGGAAGAGGTTTCCTCGAATGCTTCGTTTCGATGTGGGATTTCATAATCCACACTCCAGGGGCCCAATGTCCTCGTTGACATATCGCCCGGTGTCTGGCTTTGATATATTTGCAACCACTCAAGCCCACAACTAACAGATATTGTTCTCTCAATGTTTTAAAGAGCGTCTATAGGGAGAGGTTTCCACACTCTTATAAGAAATGCTTCGTTCCCCTCTCTAACCGATGTGAGATCTCACAATCCACCCCCTTGGAGGCTAGCGCCTCGCTTGCACACCACCTAGTGTCTGGCTATGCACGCCGTTCAGTACTGGCTATGCACGCCGTTCAGTACTGGCTATGATACCATTTGTTGCCCAAATCCACTGCTAGTAGATATGGTTCTCTTTGGACTTTCCCTCTAGTGCTTCCCCTCAAGATTTTAAAACACGTTTGCTAGGGAGAGGTTCCCACACGCTTATAAGAAATGCTTAGTTTCCCTTTACAACCGATGTGACATCTCACAATCCACTCCCTTTGGGGGCCCAGTATCCTTGATGGCACGCCGTCTAGTGTCTGGTTCTGATACCATTTGTAACAGCTCAAGCCCACCGCTAGCTGATATTGTCCTCGTTGAGCTTTCCCTTCTGGGCTTCTCCTCAATGTGTGTCTGCTAGGGAGAGGTTTTCACACCCTTATAAGAAATGTTTTGTTCCCTTCTCCCCGGATGTGGGATCTCACACATGGGATATGACAGTCATATATTGAAAGGTCGATCGAGAGTCAAAACCAACCCTAATATTGCTTAAACAAAGTTTTGAGGCTGAAAACGAAGGTTTTGAAGAACAAAAGTAATTCTGATATCTTTTCCTGTGCAGGAATCAAGCAAGGCTACAGAGGAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGGTATGAACATAGTTAGCCGTGTTTTGTTTGGCTGGTGATCATTTGGGGAGGTTTTGTCTAACTTTAAGTCGGTTACAAATTTAGCGGCTTGAATCTTGGACTTTAGAATGTAATATGTAATAGCCCATGCCCACAACTGGTAGATATTATCCGCTTTCGCGCGTTATGTATCTCCGTCAGCTTTACTGTTTTAGAACGTGTCTGGCTGATGGCTATATGTAACGGGCCAAAATGGACAATATCTGCTAATGGTGGGCTTAGGCTGTTCCAAATGGTGTCAGAGCTAGACATCGGACGATGTGCCAGTGATTACGTTGGCCCCCAATAAGGGTGGATTGTGAGATCCCACATCGGTTGAGGGGAACAAACGAAGCATTCTTTATGAATTTTTCCCTAGCAAACGCGTTTTAAAGCGTTGAAGGGAACCTCAAAAGGAAAAGTCCAAAGAGGATAATATCTGTTAGCTGTGGGTTTAAGCTGTTCCAAATGGTATTAGAGCCCGACACAAGGCGGTGTGTCAATAAGGATGTTGGGCCCCCAATGAGGGTGGATTGTGAGATCCCACATCGGTGGGAGAGAGAAACAAACGAAGCATTCTTAATGAATTTTTCCCTAGCAAAAGCGTTTTAAAGCCTTGAAAGGAACCTCAGAAAGAAAAGCCCAAAGAGGACAATATCTGCAAGCGGTGGGTTTGAGCTGTTCCAAATGGTATTAGAGCCAGACACAGGGTGGTGTGTCAGTGAGGACGTTGGGCCCCTAAGGAGGGTGGATTTGCGAGATCCTACATTGATTCGAGAGGGGAACGAAACATTCCTTCTAAGGGTGTGGAAACCTCTCTCTAGCATACGCATTTTAAAACCGTGAGGCTGGCGATAATACGGAATGGGCCAAAGCGGGCTTCGGTTGTTACGTATATCCAAACATGTCAAAGTAAATTGAATTGAAATGAATCCAATATGTTTTGGTTTTGCCATGTTCTCTCCAGTACTCTTCTAGTGGCCTAATCCAACCAGGAGGACATTACATTCAACACCAACAAGCTCAGCAAATGACACCACAATCACTGATGGCTGCTCGGTCCTCCATGTTGTACACCCAACAGCCATTTTCTAGCCTGCAGCAGCAAGCTTTACACAGCCAACTCGGGATGAGCTCCGGAGGCGGCATAGGATTCAACATGCTGCAAAACGATGCCGCCAATGCCGGAGGCAACGGAGGAGCCCTTGGAGGAGGAGGAGGATTCCCAGATTTCAGCCACAATGCTGCAGCTGATAGCTTGCACCGCAGCCTAGCTGGTGGGAGCAAGCAAGATATGGGAGGAAGCGGGTCGGGCGAGGGACGTGGAGGGAGCTCCGGGAGCCATGGCGGCGATGGAGGTGAGACGCTCTACTTGAAATCAGCTGATGATGGGAACTGAAAGTATGAGAATAAAGTCAATAGAAATTATGAGTAAACAATGGGGTGAGGATTCAAACCTCATAAAACTTTGATCTTTGGTGTTCTTTTTCCAAGTTAAGGTATTTGTTTGTAGTGTATTATGTAAATTTTCTTCTCTTTCTTTTGTGCTTATGAGAAGTGAACGAACGAACGAACTGATATCATATTCGAATGAGAGTGATTATGATCTCGTCGGGTATTCCTTCAATGTTTTTAAAACGCGCCTGCTAGAGAGGTTCTCACACCCTTATAAAGAATGCTCTTTCTCCTC TGTTAGGAGCAGCAGCAACCCCTTAGCCCATCTGGTTGCCTCAATAAAGTTAAAATTTGCATACACATTCAAACAAACTTTGGATTTTCTCTTTCATTATCGCTCACGTGACACCTTTCCCTTGCTCTGTGAGGGAGAGAAGTGGCATCTTTGGCCACAAACAAAGCCAAAACGGCTGCCCCAAAGCTCCTTTTCTCTCTGCTCTGCTACCTCTCTCATAATGCATTTTCTGTTTGTGTAATTTGCAGAAGCTCTGCTACCTTCCTCTGTCACTATCACCGTCCAAACCCCCTCTCCCTTCCCTCTCTGTTTCAAAACCCCAAAGAAGAAGAGAAGAAAATCAGCTGTTTCTTTGAAAACCCATCATTCATTTCTCTCAAATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATCCCAACAACGTCACTACTGATCATATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCTAGTGGCCTAATCCAACCAGGAGGACATTACATTCAACACCAACAAGCTCAGCAAATGACACCACAATCACTGATGGCTGCTCGGTCCTCCATGTTGTACACCCAACAGCCATTTTCTAGCCTGCAGCAGCAAGCTTTACACAGCCAACTCGGGATGAGCTCCGGAGGCGGCATAGGATTCAACATGCTGCAAAACGATGCCGCCAATGCCGGAGGCAACGGAGGAGCCCTTGGAGGAGGAGGAGGATTCCCAGATTTCAGCCACAATGCTGCAGCTGATAGCTTGCACCGCAGCCTAGCTGGTGGGAGCAAGCAAGATATGGGAGGAAGCGGGTCGGGCGAGGGACGTGGAGGGAGCTCCGGGAGCCATGGCGGCGATGGAGGTGAGACGCTCTACTTGAAATCAGCTGATGATGGGAACTGAAAGTATGAGAATAAAGTCAATAGAAATTATGAGTAAACAATGGGGTGAGGATTCAAACCTCATAAAACTTTGATCTTTGGTGTTCTTTTTCCAAGTTAAGGTATTTGTTTGTAGTGTATTATGTAAATTTTCTTCTCTTTCTTTTGTGCTTATGAGAAGTGAACGAACGAACGAACTGATATCATATTCGAATGAGAGTGATTATGATCTCGTCGGGTATTCCTTCAATGTTTTTAAAACGCGCCTGCTAGAGAGGTTCTCACACCCTTATAAAGAATGCTCTTTCTCCTC ATGCAACAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTATTATCCCAACAACGTCACTACTGATCATATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAGAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCAAGGCTACAGAGGAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGTACTCTTCTAGTGGCCTAATCCAACCAGGAGGACATTACATTCAACACCAACAAGCTCAGCAAATGACACCACAATCACTGATGGCTGCTCGGTCCTCCATGTTGTACACCCAACAGCCATTTTCTAGCCTGCAGCAGCAAGCTTTACACAGCCAACTCGGGATGAGCTCCGGAGGCGGCATAGGATTCAACATGCTGCAAAACGATGCCGCCAATGCCGGAGGCAACGGAGGAGCCCTTGGAGGAGGAGGAGGATTCCCAGATTTCAGCCACAATGCTGCAGCTGATAGCTTGCACCGCAGCCTAGCTGGTGGGAGCAAGCAAGATATGGGAGGAAGCGGGTCGGGCGAGGGACGTGGAGGGAGCTCCGGGAGCCATGGCGGCGATGGAGGTGAGACGCTCTACTTGAAATCAGCTGATGATGGGAACTGA MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQYSSSGLIQPGGHYIQHQQAQQMTPQSLMAARSSMLYTQQPFSSLQQQALHSQLGMSSGGGIGFNMLQNDAANAGGNGGALGGGGGFPDFSHNAAADSLHRSLAGGSKQDMGGSGSGEGRGGSSGSHGGDGGETLYLKSADDGN
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: GIF1_ARATH (GRF1-interacting factor 1 OS=Arabidopsis thaliana GN=GIF1 PE=1 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.7e-61 Identity = 155/241 (64.32%), Postives = 172/241 (71.37%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: GIF2_ARATH (GRF1-interacting factor 2 OS=Arabidopsis thaliana GN=GIF2 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 6.0e-19 Identity = 80/183 (43.72%), Postives = 105/183 (57.38%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: GIF3_ARATH (GRF1-interacting factor 3 OS=Arabidopsis thaliana GN=GIF3 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15 Identity = 87/242 (35.95%), Postives = 117/242 (48.35%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: S18L2_HUMAN (SS18-like protein 2 OS=Homo sapiens GN=SS18L2 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-06 Identity = 32/69 (46.38%), Postives = 41/69 (59.42%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. Swiss-Prot
Match: S18L2_MOUSE (SS18-like protein 2 OS=Mus musculus GN=Ss18l2 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.8e-06 Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: A0A0A0LL92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010170 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 1.7e-105 Identity = 213/225 (94.67%), Postives = 218/225 (96.89%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: A0A061F2S4_THECC (SSXT family protein isoform 1 OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 9.4e-88 Identity = 183/227 (80.62%), Postives = 202/227 (88.99%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: W9RHN8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024545 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 4.7e-87 Identity = 181/224 (80.80%), Postives = 194/224 (86.61%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: A0A061F252_THECC (SSXT family protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_026261 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 2.3e-86 Identity = 183/228 (80.26%), Postives = 202/228 (88.60%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. TrEMBL
Match: B9S7I1_RICCO (Synovial sarcoma associated ss18 protein, putative OS=Ricinus communis GN=RCOM_0608010 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 6.3e-84 Identity = 177/225 (78.67%), Postives = 199/225 (88.44%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. TAIR10
Match: AT5G28640.1 (AT5G28640.1 SSXT family protein) HSP 1 Score: 236.1 bits (601), Expect = 2.1e-62 Identity = 155/241 (64.32%), Postives = 172/241 (71.37%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. TAIR10
Match: AT4G00850.1 (AT4G00850.1 GRF1-interacting factor 3) HSP 1 Score: 84.3 bits (207), Expect = 1.0e-16 Identity = 87/242 (35.95%), Postives = 117/242 (48.35%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. TAIR10
Match: AT1G01160.2 (AT1G01160.2 GRF1-interacting factor 2) HSP 1 Score: 78.6 bits (192), Expect = 5.6e-15 Identity = 80/217 (36.87%), Postives = 105/217 (48.39%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|449442961|ref|XP_004139249.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis sativus]) HSP 1 Score: 390.2 bits (1001), Expect = 2.4e-105 Identity = 213/225 (94.67%), Postives = 218/225 (96.89%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|659070713|ref|XP_008456296.1| (PREDICTED: GRF1-interacting factor 1 [Cucumis melo]) HSP 1 Score: 388.7 bits (997), Expect = 7.1e-105 Identity = 212/225 (94.22%), Postives = 217/225 (96.44%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|1009117529|ref|XP_015875366.1| (PREDICTED: GRF1-interacting factor 1 [Ziziphus jujuba]) HSP 1 Score: 339.0 bits (868), Expect = 6.5e-90 Identity = 186/225 (82.67%), Postives = 199/225 (88.44%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|590642355|ref|XP_007030495.1| (SSXT family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 331.3 bits (848), Expect = 1.3e-87 Identity = 183/227 (80.62%), Postives = 202/227 (88.99%), Query Frame = 1
BLAST of Cp4.1LG07g09690 vs. NCBI nr
Match: gi|703121167|ref|XP_010102263.1| (hypothetical protein L484_024545 [Morus notabilis]) HSP 1 Score: 328.9 bits (842), Expect = 6.7e-87 Identity = 181/224 (80.80%), Postives = 194/224 (86.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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