Cp4.1LG01g20820 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGATTCAGAGTCTCGCCGGACGACAATCGGGTGCTACCCGAGCAAAACCCGACCGCCCACTACCTGCCCTCCGTCAATGCCAACCACCTTGCTCCAATCGATCCGGCGAAATCAGAAATTTCAACGTTGACCAAGCCTGCAATCCCGTATCAGGTCGGCGACAGAAAAGCGCAATCTGTGCTTCCGTTCATTCCGGCGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGGAAAGCGCAATCTGTGCTTCCGTTCATTCCGGTGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGGAAAGCGCAATCTGTGCTTCCGTTCATTCCGGTGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGGAAAGCGCAATCTGTGCTTCCGTTCATTCCGGTGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGAAAGGCGCAATCTGTGCTTCCGTTGATCCCGGCGACCCCAGAGACGGCGGTGACGTCGACCAATTCTCTCGGGTACAGAGCCGGCGTCGGAAAAGGGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTCCTCAAAACGCTCTTCCGCCGCTCGCCGAAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAG ATGCGATTCAGAGTCTCGCCGGACGACAATCGGGTGCTACCCGAGCAAAACCCGACCGCCCACTACCTGCCCTCCGTCAATGCCAACCACCTTGCTCCAATCGATCCGGCGAAATCAGAAATTTCAACGTTGACCAAGCCTGCAATCCCGTATCAGGTCGGCGACAGAAAAGCGCAATCTGTGCTTCCGTTCATTCCGGCGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGGAAAGCGCAATCTGTGCTTCCGTTCATTCCGGTGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGGAAAGCGCAATCTGTGCTTCCGTTCATTCCGGTGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGGAAAGCGCAATCTGTGCTTCCGTTCATTCCGGTGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGAAAGGCGCAATCTGTGCTTCCGTTGATCCCGGCGACCCCAGAGACGGCGGTGACGTCGACCAATTCTCTCGGGTACAGAGCCGGCGTCGGAAAAGGGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTCCTCAAAACGCTCTTCCGCCGCTCGCCGAAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAG ATGCGATTCAGAGTCTCGCCGGACGACAATCGGGTGCTACCCGAGCAAAACCCGACCGCCCACTACCTGCCCTCCGTCAATGCCAACCACCTTGCTCCAATCGATCCGGCGAAATCAGAAATTTCAACGTTGACCAAGCCTGCAATCCCGTATCAGGTCGGCGACAGAAAAGCGCAATCTGTGCTTCCGTTCATTCCGGCGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGGAAAGCGCAATCTGTGCTTCCGTTCATTCCGGTGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGGAAAGCGCAATCTGTGCTTCCGTTCATTCCGGTGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGGAAAGCGCAATCTGTGCTTCCGTTCATTCCGGTGAACCCAGAGACGGCGGTGGTGTCGACCAGGCCTGCAATCCCATATCAGGTCGCCGACGGAAAGGCGCAATCTGTGCTTCCGTTGATCCCGGCGACCCCAGAGACGGCGGTGACGTCGACCAATTCTCTCGGGTACAGAGCCGGCGTCGGAAAAGGGAAATCTGTAATTCCGAAGAAGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGGACTTCCTCAAAACGCTCTTCCGCCGCTCGCCGAAAACCCACCGCCGCCGCCCCAAACCCATTATCCATGACTAG MRFRVSPDDNRVLPEQNPTAHYLPSVNANHLAPIDPAKSEISTLTKPAIPYQVGDRKAQSVLPFIPANPETAVVSTRPAIPYQVADGKAQSVLPFIPVNPETAVVSTRPAIPYQVADGKAQSVLPFIPVNPETAVVSTRPAIPYQVADGKAQSVLPFIPVNPETAVVSTRPAIPYQVADGKAQSVLPLIPATPETAVTSTNSLGYRAGVGKGKSVIPKKRKLVKTMMYHCIKDFLKTLFRRSPKTHRRRPKPIIHD
BLAST of Cp4.1LG01g20820 vs. TrEMBL
Match: L0E044_THIND (TPR repeat-containing protein OS=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) GN=TVNIR_2943 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.3e-10 Identity = 57/186 (30.65%), Postives = 96/186 (51.61%), Query Frame = 1
BLAST of Cp4.1LG01g20820 vs. TrEMBL
Match: W0DLG4_9GAMM (Highly repetitive protein OS=Thioalkalivibrio paradoxus ARh 1 GN=THITH_04880 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.7e-08 Identity = 51/175 (29.14%), Postives = 87/175 (49.71%), Query Frame = 1
BLAST of Cp4.1LG01g20820 vs. TrEMBL
Match: W4Z5A2_STRPU (Uncharacterized protein OS=Strongylocentrotus purpuratus GN=Sp-Hypp_2666 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.4e-07 Identity = 57/172 (33.14%), Postives = 71/172 (41.28%), Query Frame = 1
BLAST of Cp4.1LG01g20820 vs. TrEMBL
Match: K4BSQ2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.3e-07 Identity = 67/201 (33.33%), Postives = 104/201 (51.74%), Query Frame = 1
BLAST of Cp4.1LG01g20820 vs. TrEMBL
Match: W4CTH9_9BACL (Putative threonine-rich GPI-anchored glycoprotein OS=Paenibacillus sp. FSL R7-277 GN=C173_29556 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.1e-06 Identity = 59/181 (32.60%), Postives = 71/181 (39.23%), Query Frame = 1
BLAST of Cp4.1LG01g20820 vs. NCBI nr
Match: gi|505072587|ref|WP_015259689.1| (hypothetical protein [Thioalkalivibrio nitratireducens]) HSP 1 Score: 73.2 bits (178), Expect = 7.6e-10 Identity = 57/186 (30.65%), Postives = 96/186 (51.61%), Query Frame = 1
BLAST of Cp4.1LG01g20820 vs. NCBI nr
Match: gi|916811564|ref|WP_051418620.1| (hypothetical protein [Thioalkalivibrio paradoxus]) HSP 1 Score: 68.2 bits (165), Expect = 2.4e-08 Identity = 51/175 (29.14%), Postives = 87/175 (49.71%), Query Frame = 1
BLAST of Cp4.1LG01g20820 vs. NCBI nr
Match: gi|780177576|ref|XP_011661563.1| (PREDICTED: extensin-like [Strongylocentrotus purpuratus]) HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07 Identity = 57/172 (33.14%), Postives = 71/172 (41.28%), Query Frame = 1
BLAST of Cp4.1LG01g20820 vs. NCBI nr
Match: gi|573552390|gb|ETT51173.1| (putative threonine-rich GPI-anchored glycoprotein [Paenibacillus sp. FSL H7-689]) HSP 1 Score: 63.2 bits (152), Expect = 7.8e-07 Identity = 61/188 (32.45%), Postives = 78/188 (41.49%), Query Frame = 1
BLAST of Cp4.1LG01g20820 vs. NCBI nr
Match: gi|723692054|ref|XP_010319742.1| (PREDICTED: uncharacterized serine-rich protein C215.13 [Solanum lycopersicum]) HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06 Identity = 67/201 (33.33%), Postives = 104/201 (51.74%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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