CmoCh04G025110 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G025110
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr04 : 18503854 .. 18504285 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGATTCAGAGTCTCGCCGGACCACAATCGGGTCATACCCGACCCACATCCGACCCCCCACCACCCGCCCTCCCTCAATGCCCACCATCTTGCTCCAATCGATCCGCCGAAATCTGTGCTTCCGTTGATTCCGGCAAACCCAGAGACGGCGGTGATGTCGACCAGGCCTGTAATCGGAAACAAAGCCGGCGACGGAAAAGCGAAATCTGTGCTTCCGTTGATCGCAGAGACGGCGGTGACGTCGACGGGGACGTTGACCGATTCTCACGGGTACAGAGTCGGCATCGGAAAAGGGAAATCTGAAATTTCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGAACTTCCTCAAATCGCTGTTCCGTCGCCCGCCGGAAACCCACAACGGCCCCAAACCCATTGCCGATTACCAGTAA

mRNA sequence

ATGCGATTCAGAGTCTCGCCGGACCACAATCGGGTCATACCCGACCCACATCCGACCCCCCACCACCCGCCCTCCCTCAATGCCCACCATCTTGCTCCAATCGATCCGCCGAAATCTGTGCTTCCGTTGATTCCGGCAAACCCAGAGACGGCGGTGATGTCGACCAGGCCTGTAATCGGAAACAAAGCCGGCGACGGAAAAGCGAAATCTGTGCTTCCGTTGATCGCAGAGACGGCGGTGACGTCGACGGGGACGTTGACCGATTCTCACGGGTACAGAGTCGGCATCGGAAAAGGGAAATCTGAAATTTCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGAACTTCCTCAAATCGCTGTTCCGTCGCCCGCCGGAAACCCACAACGGCCCCAAACCCATTGCCGATTACCAGTAA

Coding sequence (CDS)

ATGCGATTCAGAGTCTCGCCGGACCACAATCGGGTCATACCCGACCCACATCCGACCCCCCACCACCCGCCCTCCCTCAATGCCCACCATCTTGCTCCAATCGATCCGCCGAAATCTGTGCTTCCGTTGATTCCGGCAAACCCAGAGACGGCGGTGATGTCGACCAGGCCTGTAATCGGAAACAAAGCCGGCGACGGAAAAGCGAAATCTGTGCTTCCGTTGATCGCAGAGACGGCGGTGACGTCGACGGGGACGTTGACCGATTCTCACGGGTACAGAGTCGGCATCGGAAAAGGGAAATCTGAAATTTCGAAGAGGAGGAAGTTAGTGAAGACGATGATGTACCACTGCATTAAGAACTTCCTCAAATCGCTGTTCCGTCGCCCGCCGGAAACCCACAACGGCCCCAAACCCATTGCCGATTACCAGTAA
Homology
[Close]
BLAST of CmoCh04G025110 vs. TrEMBL
Match: A0A0A0KDQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G374710 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.7e-06
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 1 

Query: 93  RVGIGKGKSEISKRRKLVKTMMYHCIKNFLKSLFRRPPETHNGPKPIA 141
           RVG  K KS I K+RKLVKTM+YH +K+FL SLFR   + HN PKPI+
Sbjct: 32  RVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPIS 79

[Close]
BLAST of CmoCh04G025110 vs. NCBI nr
Match: gi|700192474|gb|KGN47678.1| (hypothetical protein Csa_6G374710 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 8.2e-06
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 1 

Query: 93  RVGIGKGKSEISKRRKLVKTMMYHCIKNFLKSLFRRPPETHNGPKPIA 141
           RVG  K KS I K+RKLVKTM+YH +K+FL SLFR   + HN PKPI+
Sbjct: 32  RVGGRKIKSVIPKQRKLVKTMIYHSLKDFLISLFRPSSDIHNRPKPIS 79

The following BLAST results are available for this feature:
BLAST of CmoCh04G025110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh04G025110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDQ7_CUCSA5.7e-0662.50Uncharacterized protein OS=Cucumis sativus GN=Csa_6G374710 PE=4 SV=1[more]
BLAST of CmoCh04G025110 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmoCh04G025110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192474|gb|KGN47678.1|8.2e-0662.50hypothetical protein Csa_6G374710 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G025110.1CmoCh04G025110.1mRNA