Lsi11G015610 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi11G015610
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_91
Locationchr11 : 23919924 .. 23920646 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTACCTCGTCCCCGCTACTACACCGACGTCAAGCTCAACGATGAGCGTGTTGATCCACCGACGCCGGTCCTTGATCCACTCCTCTCATGGGCGAACGAGGCTCATTGGTCAATGGGTGGCCTCAGCTTCAATCGCCTCAGGCTTCAAGGTCGAATCGAAGGCAATGTCCACAAGCTTCGAGTCGAGCGCGAGAAGGTGGCCAAGAAGAAGCTTAAAGCCAAGAAACTGGACTCTGCGCCAAAGAGATCTGAATCAGATACTGGAGCTGATGCCGATCGCCAATTCAATAAGGTGAGATCTGTATCTCCACCGCCGGCACCAATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGATGATGTTGGCGTGGATAAAGTAGAGACTAGGGTTGTGAAGAGGAGGTTGGTGAAGAAGTTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGAGGAATCAATTGAAGGGTTTGAAGGATAGAAGCTCGGAGATCAATGGGGTTGATGAATCTGTAATGAAGATCGTTGAAGAGATTAATGATGAAAATACTAAAGGGAAAAAGATGAACAGTGAAAGAAAGGGGAAGAATGGTGGAAAACTGGAGTCTGGTTCTGTTTCTTCTACAAGAACTTCTCCTAGATTGGCTAATAAGCGTGGATTAAATTGA

mRNA sequence

ATGGTTGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTACCTCGTCCCCGCTACTACACCGACGTCAAGCTCAACGATGAGCGTGTTGATCCACCGACGCCGGTCCTTGATCCACTCCTCTCATGGGCGAACGAGGCTCATTGGTCAATGGGTGGCCTCAGCTTCAATCGCCTCAGGCTTCAAGGTCGAATCGAAGGCAATGTCCACAAGCTTCGAGTCGAGCGCGAGAAGGTGGCCAAGAAGAAGCTTAAAGCCAAGAAACTGGACTCTGCGCCAAAGAGATCTGAATCAGATACTGGAGCTGATGCCGATCGCCAATTCAATAAGGTGAGATCTGTATCTCCACCGCCGGCACCAATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGATGATGTTGGCGTGGATAAAGTAGAGACTAGGGTTGTGAAGAGGAGGTTGGTGAAGAAGTTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGAGGAATCAATTGAAGGGTTTGAAGGATAGAAGCTCGGAGATCAATGGGGTTGATGAATCTGTAATGAAGATCGTTGAAGAGATTAATGATGAAAATACTAAAGGGAAAAAGATGAACAGTGAAAGAAAGGGGAAGAATGGTGGAAAACTGGAGTCTGGTTCTGTTTCTTCTACAAGAACTTCTCCTAGATTGGCTAATAAGCGTGGATTAAATTGA

Coding sequence (CDS)

ATGGTTGTTCCTCTCGGCCCCGGCAAGTTCTACGGCAGCAGCCTACCTCGTCCCCGCTACTACACCGACGTCAAGCTCAACGATGAGCGTGTTGATCCACCGACGCCGGTCCTTGATCCACTCCTCTCATGGGCGAACGAGGCTCATTGGTCAATGGGTGGCCTCAGCTTCAATCGCCTCAGGCTTCAAGGTCGAATCGAAGGCAATGTCCACAAGCTTCGAGTCGAGCGCGAGAAGGTGGCCAAGAAGAAGCTTAAAGCCAAGAAACTGGACTCTGCGCCAAAGAGATCTGAATCAGATACTGGAGCTGATGCCGATCGCCAATTCAATAAGGTGAGATCTGTATCTCCACCGCCGGCACCAATTGCAACCAAGAGACGGCGATTGATGGTTCTGTTTGAAGATGAGGATGATGTTGGCGTGGATAAAGTAGAGACTAGGGTTGTGAAGAGGAGGTTGGTGAAGAAGTTGGGAGATGATTTTGATCGAGTGGCTGCAGAGAGTAAGAGGAATCAATTGAAGGGTTTGAAGGATAGAAGCTCGGAGATCAATGGGGTTGATGAATCTGTAATGAAGATCGTTGAAGAGATTAATGATGAAAATACTAAAGGGAAAAAGATGAACAGTGAAAGAAAGGGGAAGAATGGTGGAAAACTGGAGTCTGGTTCTGTTTCTTCTACAAGAACTTCTCCTAGATTGGCTAATAAGCGTGGATTAAATTGA

Protein sequence

MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPAPIATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRSSEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKRGLN
Homology
[Close]
BLAST of Lsi11G015610 vs. TrEMBL
Match: A0A0A0K3S4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.4e-108
Identity = 208/240 (86.67%), Postives = 221/240 (92.08%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNVHKLR EREKVAKKKLKA+KLDSAPKRS+ D GADA RQ  K RSV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180
           PIATKRRRLMVLFEDEDD+G++K E  VVKRRLVKKLGDDFDRVAAESKR+QLKGLKDRS
Sbjct: 121 PIATKRRRLMVLFEDEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDRS 180

Query: 181 SEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKRGLN 240
           SEINGV+ESVMKIVEEIN+ENTK KK N ERKGK GG +ES SVS +R+SPRLANKR LN
Sbjct: 181 SEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRALN 240

[Close]
BLAST of Lsi11G015610 vs. TrEMBL
Match: W9R4I2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.0e-55
Identity = 143/253 (56.52%), Postives = 169/253 (66.80%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           M+V LGPGKFYG+SLPRPR+YTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           R QGRIEG+V KLR EREK+ +K+ K  K  +    + SD    ++R+       SPPPA
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDL-VGSERKMVDSDEDSPPPA 120

Query: 121 PIATKRRRLMVLF-EDEDDVGVDKVE------TRVVKRRLVKKLGDDFDRVAAESK---R 180
           PIATKRRR M L  EDE+D   ++ E       RV +RRLVKKLGDDFDRVA E++   R
Sbjct: 121 PIATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKLGDDFDRVAPENEKADR 180

Query: 181 NQLKGL------KDRSSEINGVDESVMKIVEEINDENTKGKK-MNSERKGKNGGKLESGS 237
           +  K L      + R  E N   E+VM +VEE+N  N+ GKK   S  KGK  G  ES  
Sbjct: 181 SPSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNSMGKKSKGSGNKGKAAGGSES-P 240

[Close]
BLAST of Lsi11G015610 vs. TrEMBL
Match: B9RVZ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.6e-53
Identity = 125/238 (52.52%), Postives = 163/238 (68.49%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTDVK N +RVDPP PV DP LSWA EAHWSMGG SF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDVKFNSDRVDPPVPVTDPFLSWAQEAHWSMGGHSFQRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEG+V+KLR  REK A  KL+A+   ++ K++++           +V S SPPPA
Sbjct: 61  RLQGRIEGSVNKLRKFREKEA--KLQARNSPASNKKNDNG---------KRVGSASPPPA 120

Query: 121 PIATKRRRLMVLFEDE-DDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDR 180
           P   KRRR M L ++E ++   +++  +V K++ V+KL  DF++VA ES  N+ K     
Sbjct: 121 PKVIKRRRFMDLMDEESEEEEEEEIVEKVKKKKSVRKLVGDFEKVATESVENKGKA---- 180

Query: 181 SSEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKR 238
                G+D++VMK+VEE+N EN+ GKK+   +KGK+  +  S  V+  RTSPRLA +R
Sbjct: 181 ---SGGIDDAVMKVVEEVNRENSVGKKLRRGKKGKSNKENGSSPVNGVRTSPRLAKQR 220

[Close]
BLAST of Lsi11G015610 vs. TrEMBL
Match: A0A061EAW7_THECC (Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 8.1e-53
Identity = 132/251 (52.59%), Postives = 160/251 (63.75%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YTD K N +RVDPP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTDTKFNSDRVDPPLPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNV +L+ +REK+ K               +S   A   ++  +  SVSPPPA
Sbjct: 61  RLQGRIEGNVKRLKAQREKLVK---------------DSPDKAHIIKKNKRDASVSPPPA 120

Query: 121 PIATKRRRLMVLFED------EDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLK 180
           P+A KRRR + L +D      ED++  ++ E RV+++   +KLGDDF+RVA+    N + 
Sbjct: 121 PVAVKRRRFLDLNDDDESENEEDEMVEEREEKRVLRKGAARKLGDDFERVAS----NGVA 180

Query: 181 GLKDRSSEINGVDESVMKIVEEIN-------DENTKGKKMNSERKGKNGGKLESGSVSST 239
             K   S  +G+   VM IVEE+N       D+  K KK  S  KG   GK+E    S T
Sbjct: 181 VSKRERSFSDGIGVDVMNIVEEVNMESEFQGDKKKKKKKKKSIEKGLKNGKVE--GQSGT 229

[Close]
BLAST of Lsi11G015610 vs. TrEMBL
Match: A0A0D2SKK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G201200 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.4e-51
Identity = 127/249 (51.00%), Postives = 165/249 (66.27%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPR YT+ + N ERV+PP PVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRIYTETRFNSERVNPPVPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNV +L+ +R+K    K      D  PK++ SD             S SPPPA
Sbjct: 61  RLQGRIEGNVQRLKAQRDKFLNNK------DPIPKKNNSDA------------SFSPPPA 120

Query: 121 PIATKRRRLMVLFE-------DEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQL 180
           P+A KR+R + L +       +++++ +++ E RV+++  V+KLGDDF+RVA +      
Sbjct: 121 PVAVKRKRFLDLNDEDVESENEDNEIVMNREEKRVLRKGAVRKLGDDFERVAKDKDSGVA 180

Query: 181 KGLKDRSSEINGVDESVMKIVEEINDENTKGKKMNSER--KG--KNGGKLESGSVSSTRT 239
            G K   S+  G+D  VMKIVEE+N E+ + KK   +R  KG  K   ++ SG+ ++TR 
Sbjct: 181 SGGKRGFSDGIGID--VMKIVEEVNVESEEIKKKKKKRIVKGLKKGTDEVRSGTGTTTRA 228

[Close]
BLAST of Lsi11G015610 vs. TAIR10
Match: AT4G28310.1 (AT4G28310.1 unknown protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 101/234 (43.16%), Postives = 130/234 (55.56%), Query Frame = 1 

Query: 3   VPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRLRL 62
           + + P  FYG+ LPRPR++ + K ND RVDPP  VLDPLLSWA +AHWSMGGL+F RLRL
Sbjct: 9   IAIRPVSFYGNGLPRPRFFDNPKFNDYRVDPPLSVLDPLLSWARDAHWSMGGLNFTRLRL 68

Query: 63  QGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPAPI 122
           QGRIEGNV+KLR + EK    KL                  ++ R+  +  S SPP API
Sbjct: 69  QGRIEGNVNKLRAQLEKSTPVKL------------------ESGRKKKRSGSESPPSAPI 128

Query: 123 ATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRSSE 182
             KRRR + L  D DD  V   +  VV  R+ +KL DDFDRVA ESK             
Sbjct: 129 VVKRRRYLDL-NDSDDEEVGSEDEGVV--RIRRKLSDDFDRVAEESK------------- 188

Query: 183 INGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANK 237
                    K+V E N ++ K + +  +R  +    ++    SSTR+SPRLA +
Sbjct: 189 --------TKLV-EANKKSIKSEFVEKKRLIEKKKIVKVNKTSSTRSSPRLAKR 199

[Close]
BLAST of Lsi11G015610 vs. TAIR10
Match: AT1G52270.1 (AT1G52270.1 unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 7.8e-07
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 1 

Query: 7  PGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWA 46
          P  FY + LPRPR++ + + N  RVD P  VLDPLLSWA
Sbjct: 13 PVAFYRNGLPRPRFFDNHRFNSYRVDTPLSVLDPLLSWA 51

[Close]
BLAST of Lsi11G015610 vs. NCBI nr
Match: gi|659110606|ref|XP_008455314.1| (PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 8.7e-109
Identity = 210/237 (88.61%), Postives = 221/237 (93.25%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNVHKLRVEREKVAKKKLKA+KLDSAPKRS+ D GADA RQ  K RSV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAEKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180
           P+ATKRRRLMVLFEDEDDVG+DK E  VVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS
Sbjct: 121 PVATKRRRLMVLFEDEDDVGMDKEEIGVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180

Query: 181 SEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKR 238
           SEIN V+ESVMKIVEEIN+ENTK K++N E+KGK  GK+ES SVS TRTSPRLANKR
Sbjct: 181 SEINEVNESVMKIVEEINNENTKVKEINIEKKGKTVGKVESVSVSGTRTSPRLANKR 237

[Close]
BLAST of Lsi11G015610 vs. NCBI nr
Match: gi|449438098|ref|XP_004136827.1| (PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.9e-108
Identity = 208/240 (86.67%), Postives = 221/240 (92.08%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYGSSLPRPRYY+DVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL
Sbjct: 1   MVVPLGPGKFYGSSLPRPRYYSDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEGNVHKLR EREKVAKKKLKA+KLDSAPKRS+ D GADA RQ  K RSV+PPPA
Sbjct: 61  RLQGRIEGNVHKLRTEREKVAKKKLKAQKLDSAPKRSDPDAGADAHRQLKKARSVTPPPA 120

Query: 121 PIATKRRRLMVLFEDEDDVGVDKVETRVVKRRLVKKLGDDFDRVAAESKRNQLKGLKDRS 180
           PIATKRRRLMVLFEDEDD+G++K E  VVKRRLVKKLGDDFDRVAAESKR+QLKGLKDRS
Sbjct: 121 PIATKRRRLMVLFEDEDDIGMEKEEIGVVKRRLVKKLGDDFDRVAAESKRSQLKGLKDRS 180

Query: 181 SEINGVDESVMKIVEEINDENTKGKKMNSERKGKNGGKLESGSVSSTRTSPRLANKRGLN 240
           SEINGV+ESVMKIVEEIN+ENTK KK N ERKGK GG +ES SVS +R+SPRLANKR LN
Sbjct: 181 SEINGVNESVMKIVEEINNENTKVKKTNIERKGKTGGNVESVSVSGSRSSPRLANKRALN 240

[Close]
BLAST of Lsi11G015610 vs. NCBI nr
Match: gi|1009129728|ref|XP_015881923.1| (PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba])

HSP 1 Score: 229.2 bits (583), Expect = 7.7e-57
Identity = 146/265 (55.09%), Postives = 174/265 (65.66%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTDVKLNDERVDPP PVLDP LSWA+EAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVPVLDPFLSWASEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEG V KL+ EREK AK+     K+ +        + +D+ R      S+SPP A
Sbjct: 61  RLQGRIEGCVKKLQAEREKFAKR----SKIVAGSSIGSGSSMSDSKRAV----SISPPAA 120

Query: 121 PIATKRRRLMVLF-EDEDDVGVDKVE----------TRVVKRRLVKKLGDDFDRVAAESK 180
           P+ATKRRRLM L  ED+DD   D+ E          +R VKRRLVK+L DDFDRVA+E++
Sbjct: 121 PMATKRRRLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLWDDFDRVASEAE 180

Query: 181 RNQ---LKGLKD------------RSSEINGVDESVMKIVEEINDENTKGKKM-NSERKG 239
           R +   LKGL              ++ E + V E+VMK+VEE+     KGK++     KG
Sbjct: 181 RGKGSPLKGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEVKMSTHKGKRVKGGGSKG 240

[Close]
BLAST of Lsi11G015610 vs. NCBI nr
Match: gi|1009165334|ref|XP_015900977.1| (PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba])

HSP 1 Score: 229.2 bits (583), Expect = 7.7e-57
Identity = 145/265 (54.72%), Postives = 175/265 (66.04%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           MVVPLGPGKFYG+SLPRPR YTDVKLNDERVDPP PVLDP LSWA+EAHWSMGGLSF RL
Sbjct: 1   MVVPLGPGKFYGTSLPRPRIYTDVKLNDERVDPPVPVLDPFLSWASEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           RLQGRIEG+V KL+ EREK AK+     K+ +        + +D+ R      S+SPP A
Sbjct: 61  RLQGRIEGSVKKLQAEREKFAKR----SKIVTGSSIGSGSSMSDSKRAV----SISPPAA 120

Query: 121 PIATKRRRLMVLF-EDEDDVGVDKVE----------TRVVKRRLVKKLGDDFDRVAAESK 180
           P+ATKRRRLM L  ED+DD   D+ E          +R VKRRLVK+L DDFDRVA+E++
Sbjct: 121 PMATKRRRLMALIDEDDDDSSADEEEEEEEVGVVAPSRGVKRRLVKRLWDDFDRVASEAE 180

Query: 181 RNQ---LKGLKD------------RSSEINGVDESVMKIVEEINDENTKGKKM-NSERKG 239
           R +   LKGL              ++ E + V E+VMK+VEE+     KGK++     KG
Sbjct: 181 RGKGSPLKGLSGGSEGMASRTRSRKTEEDDEVTETVMKVVEEVKMSTHKGKRVKGGGSKG 240

[Close]
BLAST of Lsi11G015610 vs. NCBI nr
Match: gi|703073457|ref|XP_010089552.1| (hypothetical protein L484_004788 [Morus notabilis])

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-55
Identity = 143/253 (56.52%), Postives = 169/253 (66.80%), Query Frame = 1 

Query: 1   MVVPLGPGKFYGSSLPRPRYYTDVKLNDERVDPPTPVLDPLLSWANEAHWSMGGLSFNRL 60
           M+V LGPGKFYG+SLPRPR+YTDVK NDERVDPPTPVLDPLLSWANEAHWSMGGLSF RL
Sbjct: 1   MMVSLGPGKFYGTSLPRPRFYTDVKFNDERVDPPTPVLDPLLSWANEAHWSMGGLSFKRL 60

Query: 61  RLQGRIEGNVHKLRVEREKVAKKKLKAKKLDSAPKRSESDTGADADRQFNKVRSVSPPPA 120
           R QGRIEG+V KLR EREK+ +K+ K  K  +    + SD    ++R+       SPPPA
Sbjct: 61  RFQGRIEGSVSKLRAEREKLERKRKKEGKQTAGSSSNGSDL-VGSERKMVDSDEDSPPPA 120

Query: 121 PIATKRRRLMVLF-EDEDDVGVDKVE------TRVVKRRLVKKLGDDFDRVAAESK---R 180
           PIATKRRR M L  EDE+D   ++ E       RV +RRLVKKLGDDFDRVA E++   R
Sbjct: 121 PIATKRRRFMDLIDEDEEDDAEEEEEEEKIRSLRVRRRRLVKKLGDDFDRVAPENEKADR 180

Query: 181 NQLKGL------KDRSSEINGVDESVMKIVEEINDENTKGKK-MNSERKGKNGGKLESGS 237
           +  K L      + R  E N   E+VM +VEE+N  N+ GKK   S  KGK  G  ES  
Sbjct: 181 SPSKSLGNGSRTRRRILEDNEAIETVMNVVEEVNKMNSMGKKSKGSGNKGKAAGGSES-P 240

The following BLAST results are available for this feature:
BLAST of Lsi11G015610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi11G015610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K3S4_CUCSA1.4e-10886.67Uncharacterized protein OS=Cucumis sativus GN=Csa_7G048030 PE=4 SV=1[more]
W9R4I2_9ROSA1.0e-5556.52Uncharacterized protein OS=Morus notabilis GN=L484_004788 PE=4 SV=1[more]
B9RVZ1_RICCO1.6e-5352.52Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1174260 PE=4 SV=1[more]
A0A061EAW7_THECC8.1e-5352.59Microtubule-associated protein 6, putative OS=Theobroma cacao GN=TCM_008115 PE=4... [more]
A0A0D2SKK6_GOSRA3.4e-5151.00Uncharacterized protein OS=Gossypium raimondii GN=B456_005G201200 PE=4 SV=1[more]
BLAST of Lsi11G015610 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28310.11.2e-3643.16 unknown protein[more]
AT1G52270.17.8e-0756.41 unknown protein[more]
BLAST of Lsi11G015610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110606|ref|XP_008455314.1|8.7e-10988.61PREDICTED: uncharacterized protein LOC103495510 [Cucumis melo][more]
gi|449438098|ref|XP_004136827.1|1.9e-10886.67PREDICTED: uncharacterized protein LOC101207471 [Cucumis sativus][more]
gi|1009129728|ref|XP_015881923.1|7.7e-5755.09PREDICTED: uncharacterized protein LOC107417790 [Ziziphus jujuba][more]
gi|1009165334|ref|XP_015900977.1|7.7e-5754.72PREDICTED: uncharacterized protein LOC107434072 [Ziziphus jujuba][more]
gi|703073457|ref|XP_010089552.1|1.5e-5556.52hypothetical protein L484_004788 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi11G015610.1Lsi11G015610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35103FAMILY NOT NAMEDcoord: 1..212
score: 1.7
NoneNo IPR availablePANTHERPTHR35103:SF1SUBFAMILY NOT NAMEDcoord: 1..212
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi11G015610Csa7G048030Cucumber (Chinese Long) v2culsiB494
Lsi11G015610CSPI07G04670Wild cucumber (PI 183967)cpilsiB505
Lsi11G015610Cucsa.147620Cucumber (Gy14) v1cgylsiB237
Lsi11G015610CmaCh11G018790Cucurbita maxima (Rimu)cmalsiB091
Lsi11G015610CmoCh11G019580Cucurbita moschata (Rifu)cmolsiB080
Lsi11G015610CmoCh19G010280Cucurbita moschata (Rifu)cmolsiB457
Lsi11G015610Cla002268Watermelon (97103) v1lsiwmB097
Lsi11G015610MELO3C018732Melon (DHL92) v3.5.1lsimeB095
Lsi11G015610ClCG07G002870Watermelon (Charleston Gray)lsiwcgB114
Lsi11G015610MELO3C018732.2Melon (DHL92) v3.6.1lsimedB101
Lsi11G015610Cla97C07G131200Watermelon (97103) v2lsiwmbB101
Lsi11G015610Bhi05G001623Wax gourdlsiwgoB116
Lsi11G015610Cp4.1LG04g03090Cucurbita pepo (Zucchini)cpelsiB526
Lsi11G015610Cp4.1LG15g08060Cucurbita pepo (Zucchini)cpelsiB199
Lsi11G015610CsGy7G004240Cucumber (Gy14) v2cgyblsiB462
Lsi11G015610Carg19124Silver-seed gourdcarlsiB659
Lsi11G015610Carg19240Silver-seed gourdcarlsiB795
Lsi11G015610CsaV3_7G004470Cucumber (Chinese Long) v3cuclsiB529
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi11G015610Cucumber (Gy14) v1cgylsiB179
Lsi11G015610Cucurbita maxima (Rimu)cmalsiB198
Lsi11G015610Cucurbita maxima (Rimu)cmalsiB472
Lsi11G015610Cucurbita maxima (Rimu)cmalsiB561
Lsi11G015610Cucurbita moschata (Rifu)cmolsiB188
Lsi11G015610Cucurbita moschata (Rifu)cmolsiB544
Lsi11G015610Cucurbita pepo (Zucchini)cpelsiB606
Lsi11G015610Wild cucumber (PI 183967)cpilsiB434
Lsi11G015610Cucumber (Chinese Long) v2culsiB430
Lsi11G015610Melon (DHL92) v3.5.1lsimeB087
Lsi11G015610Watermelon (Charleston Gray)lsiwcgB092
Lsi11G015610Watermelon (97103) v1lsiwmB103
Lsi11G015610Cucumber (Gy14) v2cgyblsiB395
Lsi11G015610Melon (DHL92) v3.6.1lsimedB091
Lsi11G015610Cucumber (Chinese Long) v3cuclsiB457
Lsi11G015610Watermelon (97103) v2lsiwmbB083
Lsi11G015610Wax gourdlsiwgoB114
Lsi11G015610Wax gourdlsiwgoB129
Lsi11G015610Bottle gourd (USVL1VR-Ls)lsilsiB024