Cla013144 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013144
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Nicastrin (AHRD V1 ***- F4J819_ARATH); contains Interpro domain(s) IPR008710 Nicastrin
Location	Chr5 : 11512341 .. 11513411 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGACGTTTCTTATGTAATTGACCATAAGCTCGGTCCATTTAAGTGCTTTCATGTTTAATAGATAATTATGTGCATAACTATGACTAAAATAATTTATTCTGTTGCATAATCTTACCACTTAATGCAGGCTGCTTCAAAAAATGTGAAGAATAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGGTACTTAGTTTCTGGTGTTACATTCTGATTACATTTCAGTGATTTCACATCTTAAATGGTTATTTTAATCTCAGTATGCAAGGTCTGTGTAATTGATTTTTTTATTTTATTTTAATTTTTTCCCCTTCCCTAGACAACTAAGGCTGGAACTCATAATTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGGTTAAGTTTTACTGTTTTACATATTTTTTTTTCCCTCTCTTTATTTATTTATTTATTTTTTATTATTATTACGATTTTGTCTCCATATAGTTTTACAATCTCACTGTGTTTATTTTATTAAAAGAGATAAGTATCTTTACAGTGTCTGGTCATCACTCCCTCCAATCAATACTTCTTCCTCTGATCAGTCTAAGCCCGTCATTCTCACAGTAGCTTCAATGGATTCTGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCAGACTCCCCCATCTCTGTATGATTTATTTTGAGCAAGTATATCAGTCATAAACCGTACCATCTTTGTTCTGCTACCCGTTAAAGTTGGTTTTGGTACATTTTAGGGCCTGATTACGTTGCTGGCTGCAGTTGATGCCCTTTCCCATGTGGATGGATTGGATGATCTTCATAAACAGGTTCTTATTGAAGCTTCCTTGTTTTTTTTTTTTTTGAGATAAGTTCTTATTGAAGCTGTTTTCTTTGTATCTAGTTGCACTGTCTTTATATAAGAGCTTACTAACTGAAATGGAAATATTCTATAATTTTTTTTTGTCTACATAGCTGTATTTTGGACTTATTTAAACTTAATCCTTCCCTTTTCATAGAGGATCAAAGCCTTAGTTACGACCTGTCTAAATTAA

mRNA sequence

ATGGTTGACGTTTCTTATGCTGCTTCAAAAAATGTGAAGAATAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGACAACTAAGGCTGGAACTCATAATTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTCTGGTCATCACTCCCTCCAATCAATACTTCTTCCTCTGATCAGTCTAAGCCCGTCATTCTCACAGTAGCTTCAATGGATTCTGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCAGACTCCCCCATCTCTGGCCTGATTACGTTGCTGGCTGCAGTTGATGCCCTTTCCCATGTGGATGGATTGGATGATCTTCATAAACAGAGGATCAAAGCCTTAGTTACGACCTGTCTAAATTAA

Coding sequence (CDS)

ATGGTTGACGTTTCTTATGCTGCTTCAAAAAATGTGAAGAATAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGACAACTAAGGCTGGAACTCATAATTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTCTGGTCATCACTCCCTCCAATCAATACTTCTTCCTCTGATCAGTCTAAGCCCGTCATTCTCACAGTAGCTTCAATGGATTCTGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCAGACTCCCCCATCTCTGGCCTGATTACGTTGCTGGCTGCAGTTGATGCCCTTTCCCATGTGGATGGATTGGATGATCTTCATAAACAGAGGATCAAAGCCTTAGTTACGACCTGTCTAAATTAA

Protein sequence

MVDVSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKALVTTCLN

Homology

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_ARATH (Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-41
Identity = 84/122 (68.85%), Postives = 98/122 (80.33%), Query Frame = 1


Query: 9   SKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSSS 68
           SK       Y S+VAEF++VM+TTKAGTHNS +CL+E TCLPLGGYSVWSSLPPI+ SSS
Sbjct: 187 SKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQEGTCLPLGGYSVWSSLPPISVSSS 246

Query: 69  DQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKAL 128
           +  KPV+LTVASMD+ASFFRDKS GADSPISGL+ LL AVDALS VDG+ +L KQ +  +
Sbjct: 247 NNRKPVVLTVASMDTASFFRDKSFGADSPISGLVALLGAVDALSRVDGISNLKKQLVFLV 306

Query: 129 VT 131
           +T
Sbjct: 307 LT 308

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_DICDI (Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 4.0e-10
Identity = 37/93 (39.78%), Postives = 50/93 (53.76%), Query Frame = 1


Query: 23  AEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMD 82
           AE D  MQ    G  N+ +CL+   C P+GG S+WSS   +     DQSKP+IL +  +D
Sbjct: 187 AELDSFMQ----GAINAETCLRRGFCEPVGGQSIWSSFSEV----IDQSKPIILVMLPID 246

Query: 83  SASFFRDKSIGADSPISGLITLLAAVDALSHVD 116
           + +FFRD + G D     L  LL+ ++ L  VD
Sbjct: 247 ATAFFRDLATGTDQSGYALTVLLSMLNTLQGVD 271

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_RAT (Nicastrin OS=Rattus norvegicus GN=Ncstn PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.1e-07
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 1


Query: 38  NSMSCLKEETCLPLGGYSVWSSLPPINTSSS-DQSKPVILTVASMDSASFFRDKSIGADS 97
           ++ S   E  C PL  Y+VWS L PINTS   +    V++    +DS SFF + + GA+S
Sbjct: 237 STFSINPEIVCDPLSDYNVWSMLKPINTSGGLEPDVRVVVAATRLDSRSFFWNVAPGAES 296

Query: 98  PISGLITLLAAVDAL 112
            ++  +T LAA +AL
Sbjct: 297 AVASFVTQLAAAEAL 311

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_HUMAN (Nicastrin OS=Homo sapiens GN=NCSTN PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-07
Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 1


Query: 33  KAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSSS-DQSKPVILTVASMDSASFFRDKS 92
           ++   ++ S   E  C PL  Y+VWS L PINT+ +      V++    +DS SFF + +
Sbjct: 233 RSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKPDDRVVVAATRLDSRSFFWNVA 292

Query: 93  IGADSPISGLITLLAAVDAL 112
            GA+S ++  +T LAA +AL
Sbjct: 293 PGAESAVASFVTQLAAAEAL 312

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_MOUSE (Nicastrin OS=Mus musculus GN=Ncstn PE=1 SV=3)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-07
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 1


Query: 38  NSMSCLKEETCLPLGGYSVWSSLPPINTSSS-DQSKPVILTVASMDSASFFRDKSIGADS 97
           ++ S   E  C PL  Y+VWS L PINTS   +    V++    +DS SFF + + GA+S
Sbjct: 237 STFSINPEIVCDPLSDYNVWSMLKPINTSVGLEPDVRVVVAATRLDSRSFFWNVAPGAES 296

Query: 98  PISGLITLLAAVDAL 112
            ++  +T LAA +AL
Sbjct: 297 AVASFVTQLAAAEAL 311

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: A0A0A0L8Z5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187280 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-56
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDYISNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 20  IQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 79

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 80  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 139

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: D7TSK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.1e-49
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN KNKK Y ++VAEFDLVMQTTK+GTH+S SCLKEETCLPLGGYSVWSSLPPIN SS
Sbjct: 182 AIKNEKNKKAYTADVAEFDLVMQTTKSGTHDSESCLKEETCLPLGGYSVWSSLPPINVSS 241

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           SDQSKPVILTVASMDSASFFRDKS+GADSPISGLI+L+AAVDALSH+DGL+DL KQ +  
Sbjct: 242 SDQSKPVILTVASMDSASFFRDKSLGADSPISGLISLMAAVDALSHLDGLNDLSKQLVFL 301

Query: 128 LVT 131
           + T
Sbjct: 302 VFT 304

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: A0A0D2TXR1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-47
Identity = 96/123 (78.05%), Postives = 111/123 (90.24%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN K +K Y +NVAEFD+VMQTTK GTH+S SCLKEETCLPLGGYSVWS++PPIN SS
Sbjct: 179 AMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLKEETCLPLGGYSVWSAVPPINNSS 238

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           S+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+LLAAVDALSHVDGLD+L+KQ +  
Sbjct: 239 SNQSKPIILTVASMDAASFFRDKSLGADSPISGLISLLAAVDALSHVDGLDNLNKQLVFL 298

Query: 128 LVT 131
           + T
Sbjct: 299 VFT 301

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: A0A0D2TUA9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-47
Identity = 96/123 (78.05%), Postives = 111/123 (90.24%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN K +K Y +NVAEFD+VMQTTK GTH+S SCLKEETCLPLGGYSVWS++PPIN SS
Sbjct: 181 AMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLKEETCLPLGGYSVWSAVPPINNSS 240

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           S+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+LLAAVDALSHVDGLD+L+KQ +  
Sbjct: 241 SNQSKPIILTVASMDAASFFRDKSLGADSPISGLISLLAAVDALSHVDGLDNLNKQLVFL 300

Query: 128 LVT 131
           + T
Sbjct: 301 VFT 303

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: A0A0D2UWB7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-47
Identity = 96/123 (78.05%), Postives = 111/123 (90.24%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN K +K Y +NVAEFD+VMQTTK GTH+S SCLKEETCLPLGGYSVWS++PPIN SS
Sbjct: 181 AMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLKEETCLPLGGYSVWSAVPPINNSS 240

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           S+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+LLAAVDALSHVDGLD+L+KQ +  
Sbjct: 241 SNQSKPIILTVASMDAASFFRDKSLGADSPISGLISLLAAVDALSHVDGLDNLNKQLVFL 300

Query: 128 LVT 131
           + T
Sbjct: 301 VFT 303

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|449445945|ref|XP_004140732.1| (PREDICTED: nicastrin [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 2.5e-57
Identity = 116/127 (91.34%), Postives = 121/127 (95.28%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDYISNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 173 IQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 232

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 233 NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 292

Query: 124 RIKALVT 131
            + A+ T
Sbjct: 293 LVFAVFT 299

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|659114563|ref|XP_008457115.1| (PREDICTED: nicastrin isoform X1 [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 9.6e-57
Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDY+SNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 191 IQEAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 250

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 251 NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 310

Query: 124 RIKALVT 131
            +  + T
Sbjct: 311 LVFVVFT 317

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|659114565|ref|XP_008457117.1| (PREDICTED: nicastrin isoform X2 [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 9.6e-57
Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDY+SNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 191 IQEAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 250

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 251 NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 310

Query: 124 RIKALVT 131
            +  + T
Sbjct: 311 LVFVVFT 317

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|700202321|gb|KGN57454.1| (hypothetical protein Csa_3G187280 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-56
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDYISNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 20  IQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 79

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 80  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 139

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|225451381|ref|XP_002264144.1| (PREDICTED: nicastrin [Vitis vinifera])

HSP 1 Score: 201.8 bits (512), Expect = 7.4e-49
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN KNKK Y ++VAEFDLVMQTTK+GTH+S SCLKEETCLPLGGYSVWSSLPPIN SS
Sbjct: 182 AIKNEKNKKAYTADVAEFDLVMQTTKSGTHDSESCLKEETCLPLGGYSVWSSLPPINVSS 241

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           SDQSKPVILTVASMDSASFFRDKS+GADSPISGLI+L+AAVDALSH+DGL+DL KQ +  
Sbjct: 242 SDQSKPVILTVASMDSASFFRDKSLGADSPISGLISLMAAVDALSHLDGLNDLSKQLVFL 301

Query: 128 LVT 131
           + T
Sbjct: 302 VFT 304

The following BLAST results are available for this feature:

BLAST of Cla013144 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NICA_ARATH	1.5e-41	68.85	Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1	[more]
NICA_DICDI	4.0e-10	39.78	Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2	[more]
NICA_RAT	4.1e-07	40.00	Nicastrin OS=Rattus norvegicus GN=Ncstn PE=1 SV=1	[more]
NICA_HUMAN	7.0e-07	36.25	Nicastrin OS=Homo sapiens GN=NCSTN PE=1 SV=2	[more]
NICA_MOUSE	7.0e-07	40.00	Nicastrin OS=Mus musculus GN=Ncstn PE=1 SV=3	[more]

BLAST of Cla013144 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Z5_CUCSA	1.1e-56	95.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187280 PE=4 SV=1	[more]
D7TSK0_VITVI	5.1e-49	82.11	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=...	[more]
A0A0D2TXR1_GOSRA	3.7e-47	78.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1	[more]
A0A0D2TUA9_GOSRA	3.7e-47	78.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1	[more]
A0A0D2UWB7_GOSRA	3.7e-47	78.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1	[more]

BLAST of Cla013144 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445945\|ref\|XP_004140732.1\|	2.5e-57	91.34	PREDICTED: nicastrin [Cucumis sativus]	[more]
gi\|659114563\|ref\|XP_008457115.1\|	9.6e-57	89.76	PREDICTED: nicastrin isoform X1 [Cucumis melo]	[more]
gi\|659114565\|ref\|XP_008457117.1\|	9.6e-57	89.76	PREDICTED: nicastrin isoform X2 [Cucumis melo]	[more]
gi\|700202321\|gb\|KGN57454.1\|	1.6e-56	95.00	hypothetical protein Csa_3G187280 [Cucumis sativus]	[more]
gi\|225451381\|ref\|XP_002264144.1\|	7.4e-49	82.11	PREDICTED: nicastrin [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008710	Nicastrin

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0016485	protein processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016485	protein processing
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005798	Golgi-associated vesicle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0044446	intracellular organelle part
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005887	integral component of plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0004175	endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla013144	Cla013144.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008710	Nicastrin	PANTHER	PTHR21092	NICASTRIN	coord: 13..123 score: 8.6
IPR008710	Nicastrin	PFAM	PF05450	Nicastrin	coord: 73..123 score: 6.5
None	No IPR available	PANTHER	PTHR21092:SF0	NICASTRIN	coord: 13..123 score: 8.6
None	No IPR available	unknown	SSF53187	Zn-dependent exopeptidases	coord: 42..112 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla013144	Cla97C05G093010	Watermelon (97103) v2	wmwmbB206
Cla013144	Csa3G187280	Cucumber (Chinese Long) v2	cuwmB243
Cla013144	MELO3C020322	Melon (DHL92) v3.5.1	mewmB461
Cla013144	ClCG05G010690	Watermelon (Charleston Gray)	wcgwmB286
Cla013144	CSPI03G17700	Wild cucumber (PI 183967)	cpiwmB242
Cla013144	CmaCh01G003390	Cucurbita maxima (Rimu)	cmawmB434
Cla013144	CmoCh01G003550	Cucurbita moschata (Rifu)	cmowmB427
Cla013144	Lsi05G002760	Bottle gourd (USVL1VR-Ls)	lsiwmB361
Cla013144	Cp4.1LG02g16620	Cucurbita pepo (Zucchini)	cpewmB568
Cla013144	CsGy3G017700	Cucumber (Gy14) v2	cgybwmB229
Cla013144	Carg07431	Silver-seed gourd	carwmB0760
Cla013144	CsaV3_3G017820	Cucumber (Chinese Long) v3	cucwmB252
Cla013144	Bhi01G001321	Wax gourd	wgowmB202

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla013144	Cucumber (Gy14) v1	cgywmB153
Cla013144	Cucurbita maxima (Rimu)	cmawmB243
Cla013144	Cucurbita moschata (Rifu)	cmowmB232
Cla013144	Cucurbita pepo (Zucchini)	cpewmB614
Cla013144	Melon (DHL92) v3.6.1	medwmB448
Cla013144	Silver-seed gourd	carwmB0166