CSPI03G17700 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G17700
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Nicastrin
Location	Chr3 : 13288189 .. 13290557 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGTGGAATCAGTATAACTTTCCCGTTTTCTTAATATCTGAGAGCAGCATTTCGTCTATACAAGAAGTAATTCTGATTCTTAAACGCTTAAAACTTTAAACTCTAAGTTGTTTCAATTACTATACAACAGTTTGGCTCAGTTGCTATATGCTTCTCTCTGGAATTGAATTTTTATTTTGACTTGTCTAAATGGTACCTCTTAGATGTTCTTTAATGGTGCACATGCCTTATTTGTCATTAAAATAAGGTCATATTGTGCTTTTATAATTCTTATAAAATGTTACACAGAGGGCTTTGCATCATCTTTTTTCCTATAAAATCATCTTGTTTCTGATTTCTTGGTTTGGTTAGGGAGCTTGGTGTCCTTTTCATTTGGGTTTTGTCGTTTTTTGTTCAATAGAAAAACAATGGAGGTTGCCTCTATGTATCTTACTTGATGAGTAAGAGTTCAGTTTTAGGTTGGGAAGAAGGGGTAGTCGTGTTTGGAATCCTAATCCTCTCGAGGGTATTTCTTGTAGATCTTTTTTATGGTTGTTGTTGGATCCTTCTCCTGCTATTGAGCCGGTCTTTGATGTGCTTTGGAGGGTTAAGGTCCCTAAAAAAGTTAAGTTCTTTACTTGGGTGTGTGAACTCTCTGGATAAGCTTTTGAGGAAGAAGTGTACAGTTATGGGGCATTTCTGTTCTATTTTTTGCTGGAAGACCTGGATCACCTTCTCTAGAGTTGTCAGTTTACGTGAGTGGTGTGCAATTGTTTCTTTCAAGAGTTGATCCGAGTGCTTGGGTGACGATTGAGGAGTTTCTTCTCCATATGCCTTTCAAGGAGAAAGCTTGATCTTTATTGAGGATATCTAGAGGCAAAGAAACAATAGAGTGTAAAGGTGTGGAGAGGGACCATGGTGATGTTTGATCCTTGCTGAGGTTCCATGTTTCTCTATGGGAATCTGTTTCAAAGACGTTTTGTGATTATCCTCTAGGTAGTATCTTAGCTAGAAACCCTTTCTTTAGAGGGGTATTGTGGACTTGGTTTTTGTGGCCCTTGTATTATTTCATTTTTTTTCTCGACGAAAATAGTTGTTTTTATTAGAAAAAAAGAATCTACTGTTACAGATCATGATTCTATGTTGATTTATGTGCTCCCGTAGCTTTATTTTGCTTGATTAGATGCCCTTCTTTTAGGTTGCGTCCTTTTTTTGGGACTTTTCTTCTTTTCTTCTTCTTAATGTTTATTATTATTATTATTCTTTTAAGTGTGGTTATTGATCACAAAGCTGAAACACAGTGTGATAAGCAAAAAGTAGAAATGTTTTTGAACAAGTGCATTTTTACCAGGGTGGAAATTCATTGATGTTTTACAATTTTGTTTTCATAATGAACAAAAAGAGGATACCTTTAGTTTATATATTTTTTTAAGGTACAGTACTTATGGTGGTATAAACAAGGACATCATTTTTGATTTATGGTTGATGCTTCTTTTGTAATTGACCATAAGTTTGATCCAGTTAAATGCTTTCATGCTTAATATCAATTATGTGAATAACTATGACTAAAATAATTTATTTTGTTGCGTAAACTTACCACTTGATGCAGGCTGCTTCAAAAAATGTGAAGAGTAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGGTACTTAGTTTTGGTGTTACATTATGATTTTGTTTCATTGATTTTATATCTTAAATGTGTTATTTATTTACTCACAGTTTGCAAGGTCTGTGTGATTGTTTTTTTCATCTTTCCCTAGACAACTAAGGCTGGAACTCATAGTTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGGTTAGTTTTACTTGAATCTTTCTGTCTCCACATAATTTCGCACTGTTTATTTTATTAAAAGAGATCAGTATCGTTACAGTGTTTGGTCATCACTTCCCCCAATCAACACTTCTTCCTCAGATCAGTCTAAGCCTGTCATTCTCACGGTAGCTTCCATGGATTCGGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCTGACTCCCCCATCTCTGTATGATTTATTTTGAGCATGTATATCAGTCATAACTCTTACCTTGTTTGTTCTGCTACCCGTTAAAGCTTTTTTTGGTACATTTTAGGGCCTGATTGCGTTGCTGGCTGCAGTTGATGCACTTTCCCATGTGGATGGGTTGGACGATCTTCATAAACAGGTTCTTATTGAAGCTGTTTTCTTTGTATATAATTGCACTTTCCTTATATTAAGAGCTTCCTAACTCAAATGGAAATATTCTATTACTTCTTTGATCTGTTTAGTTGCATTTTAGACTGAGTTAACTTTAATTCTTCCCCTGTGA

mRNA sequence

ATGTGGAATCAGTATAACTTTCCCGTTTTCTTAATATCTGAGAGCAGCATTTCGTCTATACAAGAAGCTGCTTCAAAAAATGTGAAGAGTAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGACAACTAAGGCTGGAACTCATAGTTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTTTGGTCATCACTTCCCCCAATCAACACTTCTTCCTCAGATCAGTCTAAGCCTGTCATTCTCACGGTAGCTTCCATGGATTCGGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCTGACTCCCCCATCTCTGGCCTGATTGCGTTGCTGGCTGCAGTTGATGCACTTTCCCATGTGGATGGGTTGGACGATCTTCATAAACAGACTGAGTTAACTTTAATTCTTCCCCTGTGA

Coding sequence (CDS)

ATGTGGAATCAGTATAACTTTCCCGTTTTCTTAATATCTGAGAGCAGCATTTCGTCTATACAAGAAGCTGCTTCAAAAAATGTGAAGAGTAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGACAACTAAGGCTGGAACTCATAGTTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTTTGGTCATCACTTCCCCCAATCAACACTTCTTCCTCAGATCAGTCTAAGCCTGTCATTCTCACGGTAGCTTCCATGGATTCGGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCTGACTCCCCCATCTCTGGCCTGATTGCGTTGCTGGCTGCAGTTGATGCACTTTCCCATGTGGATGGGTTGGACGATCTTCATAAACAGACTGAGTTAACTTTAATTCTTCCCCTGTGA

Homology

[Close]

BLAST of CSPI03G17700 vs. Swiss-Prot
Match: NICA_ARATH (Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-49
Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPV+L+SES IS++ E  SK       Y S+VAEF++VM+TTKAGTH+S +CL+
Sbjct: 163 MWRNYNFPVYLLSESGISAVHEILSKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQ 222

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           E TCLPLGGYSVWSSLPPI+ SSS+  KPV+LTVASMD+ASFFRDKS GADSPISGL+AL
Sbjct: 223 EGTCLPLGGYSVWSSLPPISVSSSNNRKPVVLTVASMDTASFFRDKSFGADSPISGLVAL 282

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           L AVDALS VDG+ +L KQ
Sbjct: 283 LGAVDALSRVDGISNLKKQ 301

[Close]

BLAST of CSPI03G17700 vs. Swiss-Prot
Match: NICA_DICDI (Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 9.8e-10
Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 1


Query: 5   YNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETC 64
           + FP+F +   +   I+  ++ N   K  Y +  AE D  MQ    G  ++ +CL+   C
Sbjct: 155 FPFPMFALELKTSIIIRNLSTINRDGK--YPAYGAELDSFMQ----GAINAETCLRRGFC 214

Query: 65  LPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAV 124
            P+GG S+WSS   +     DQSKP+IL +  +D+ +FFRD + G D     L  LL+ +
Sbjct: 215 EPVGGQSIWSSFSEV----IDQSKPIILVMLPIDATAFFRDLATGTDQSGYALTVLLSML 271

Query: 125 DALSHVD 132
           + L  VD
Sbjct: 275 NTLQGVD 271

[Close]

BLAST of CSPI03G17700 vs. TrEMBL
Match: A0A0A0L8Z5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187280 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.0e-69
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           LAAVDALSHVDGLDDLHKQ
Sbjct: 121 LAAVDALSHVDGLDDLHKQ 139

[Close]

BLAST of CSPI03G17700 vs. TrEMBL
Match: D7TSK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-56
Identity = 113/139 (81.29%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWN YNFP+FL+S+SS  ++QE A KN K+KK Y ++VAEFDLVMQTTK+GTH S SCLK
Sbjct: 159 MWNTYNFPMFLLSQSSTLTLQEVAIKNEKNKKAYTADVAEFDLVMQTTKSGTHDSESCLK 218

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPIN SSSDQSKPVILTVASMDSASFFRDKS+GADSPISGLI+L
Sbjct: 219 EETCLPLGGYSVWSSLPPINVSSSDQSKPVILTVASMDSASFFRDKSLGADSPISGLISL 278

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           +AAVDALSH+DGL+DL KQ
Sbjct: 279 MAAVDALSHLDGLNDLSKQ 297

[Close]

BLAST of CSPI03G17700 vs. TrEMBL
Match: A0A0D2TUA9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.7e-56
Identity = 111/139 (79.86%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPVFL+SESS S++QE A KN K++K Y +NVAEFD+VMQTTK GTH S SCLK
Sbjct: 158 MWKSYNFPVFLLSESSTSTLQEIAMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLK 217

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWS++PPIN SSS+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+L
Sbjct: 218 EETCLPLGGYSVWSAVPPINNSSSNQSKPIILTVASMDAASFFRDKSLGADSPISGLISL 277

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           LAAVDALSHVDGLD+L+KQ
Sbjct: 278 LAAVDALSHVDGLDNLNKQ 296

[Close]

BLAST of CSPI03G17700 vs. TrEMBL
Match: A0A0D2TXR1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.7e-56
Identity = 111/139 (79.86%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPVFL+SESS S++QE A KN K++K Y +NVAEFD+VMQTTK GTH S SCLK
Sbjct: 156 MWKSYNFPVFLLSESSTSTLQEIAMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLK 215

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWS++PPIN SSS+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+L
Sbjct: 216 EETCLPLGGYSVWSAVPPINNSSSNQSKPIILTVASMDAASFFRDKSLGADSPISGLISL 275

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           LAAVDALSHVDGLD+L+KQ
Sbjct: 276 LAAVDALSHVDGLDNLNKQ 294

[Close]

BLAST of CSPI03G17700 vs. TrEMBL
Match: A0A0D2UWB7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.7e-56
Identity = 111/139 (79.86%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPVFL+SESS S++QE A KN K++K Y +NVAEFD+VMQTTK GTH S SCLK
Sbjct: 158 MWKSYNFPVFLLSESSTSTLQEIAMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLK 217

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWS++PPIN SSS+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+L
Sbjct: 218 EETCLPLGGYSVWSAVPPINNSSSNQSKPIILTVASMDAASFFRDKSLGADSPISGLISL 277

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           LAAVDALSHVDGLD+L+KQ
Sbjct: 278 LAAVDALSHVDGLDNLNKQ 296

[Close]

BLAST of CSPI03G17700 vs. TAIR10
Match: AT3G52640.2 (AT3G52640.2 Zn-dependent exopeptidases superfamily protein)

HSP 1 Score: 196.4 bits (498), Expect = 1.2e-50
Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPV+L+SES IS++ E  SK       Y S+VAEF++VM+TTKAGTH+S +CL+
Sbjct: 163 MWRNYNFPVYLLSESGISAVHEILSKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQ 222

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           E TCLPLGGYSVWSSLPPI+ SSS+  KPV+LTVASMD+ASFFRDKS GADSPISGL+AL
Sbjct: 223 EGTCLPLGGYSVWSSLPPISVSSSNNRKPVVLTVASMDTASFFRDKSFGADSPISGLVAL 282

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           L AVDALS VDG+ +L KQ
Sbjct: 283 LGAVDALSRVDGISNLKKQ 301

[Close]

BLAST of CSPI03G17700 vs. NCBI nr
Match: gi|449445945|ref|XP_004140732.1| (PREDICTED: nicastrin [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-69
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 154 MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 213

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 214 EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 273

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           LAAVDALSHVDGLDDLHKQ
Sbjct: 274 LAAVDALSHVDGLDDLHKQ 292

[Close]

BLAST of CSPI03G17700 vs. NCBI nr
Match: gi|700202321|gb|KGN57454.1| (hypothetical protein Csa_3G187280 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-69
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           LAAVDALSHVDGLDDLHKQ
Sbjct: 121 LAAVDALSHVDGLDDLHKQ 139

[Close]

BLAST of CSPI03G17700 vs. NCBI nr
Match: gi|659114565|ref|XP_008457117.1| (PREDICTED: nicastrin isoform X2 [Cucumis melo])

HSP 1 Score: 268.9 bits (686), Expect = 5.5e-69
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWN+YNFPVFLISESSISSIQEAASKNVKSKKDY+SNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 172 MWNRYNFPVFLISESSISSIQEAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLK 231

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 232 EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 291

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           LAAVDALSHVDGLDDLHKQ
Sbjct: 292 LAAVDALSHVDGLDDLHKQ 310

[Close]

BLAST of CSPI03G17700 vs. NCBI nr
Match: gi|659114563|ref|XP_008457115.1| (PREDICTED: nicastrin isoform X1 [Cucumis melo])

HSP 1 Score: 268.9 bits (686), Expect = 5.5e-69
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWN+YNFPVFLISESSISSIQEAASKNVKSKKDY+SNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 172 MWNRYNFPVFLISESSISSIQEAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLK 231

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 232 EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 291

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           LAAVDALSHVDGLDDLHKQ
Sbjct: 292 LAAVDALSHVDGLDDLHKQ 310

[Close]

BLAST of CSPI03G17700 vs. NCBI nr
Match: gi|225451381|ref|XP_002264144.1| (PREDICTED: nicastrin [Vitis vinifera])

HSP 1 Score: 227.3 bits (578), Expect = 1.8e-56
Identity = 113/139 (81.29%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWN YNFP+FL+S+SS  ++QE A KN K+KK Y ++VAEFDLVMQTTK+GTH S SCLK
Sbjct: 159 MWNTYNFPMFLLSQSSTLTLQEVAIKNEKNKKAYTADVAEFDLVMQTTKSGTHDSESCLK 218

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPIN SSSDQSKPVILTVASMDSASFFRDKS+GADSPISGLI+L
Sbjct: 219 EETCLPLGGYSVWSSLPPINVSSSDQSKPVILTVASMDSASFFRDKSLGADSPISGLISL 278

Query: 121 LAAVDALSHVDGLDDLHKQ 140
           +AAVDALSH+DGL+DL KQ
Sbjct: 279 MAAVDALSHLDGLNDLSKQ 297

The following BLAST results are available for this feature:

BLAST of CSPI03G17700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NICA_ARATH	2.2e-49	69.78	Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1	[more]
NICA_DICDI	9.8e-10	33.86	Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2	[more]

BLAST of CSPI03G17700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Z5_CUCSA	1.0e-69	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187280 PE=4 SV=1	[more]
D7TSK0_VITVI	1.3e-56	81.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=...	[more]
A0A0D2TUA9_GOSRA	3.7e-56	79.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1	[more]
A0A0D2TXR1_GOSRA	3.7e-56	79.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1	[more]
A0A0D2UWB7_GOSRA	3.7e-56	79.86	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1	[more]

BLAST of CSPI03G17700 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G52640.2	1.2e-50	69.78	Zn-dependent exopeptidases superfamily protein	[more]

BLAST of CSPI03G17700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445945\|ref\|XP_004140732.1\|	1.4e-69	100.00	PREDICTED: nicastrin [Cucumis sativus]	[more]
gi\|700202321\|gb\|KGN57454.1\|	1.4e-69	100.00	hypothetical protein Csa_3G187280 [Cucumis sativus]	[more]
gi\|659114565\|ref\|XP_008457117.1\|	5.5e-69	98.56	PREDICTED: nicastrin isoform X2 [Cucumis melo]	[more]
gi\|659114563\|ref\|XP_008457115.1\|	5.5e-69	98.56	PREDICTED: nicastrin isoform X1 [Cucumis melo]	[more]
gi\|225451381\|ref\|XP_002264144.1\|	1.8e-56	81.29	PREDICTED: nicastrin [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008710	Nicastrin

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0016485	protein processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016485	protein processing
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005798	Golgi-associated vesicle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005887	integral component of plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004175	endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G17700.1	CSPI03G17700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008710	Nicastrin	PANTHER	PTHR21092	NICASTRIN	coord: 1..139 score: 4.4
IPR008710	Nicastrin	PFAM	PF05450	Nicastrin	coord: 89..139 score: 8.1
None	No IPR available	PANTHER	PTHR21092:SF0	NICASTRIN	coord: 1..139 score: 4.4
None	No IPR available	unknown	SSF53187	Zn-dependent exopeptidases	coord: 62..127 score: 5.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G17700	Cla013144	Watermelon (97103) v1	cpiwmB242
CSPI03G17700	Csa3G187280	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G17700	CsGy3G017700	Cucumber (Gy14) v2	cgybcpiB110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G17700	Melon (DHL92) v3.6.1	cpimedB239
CSPI03G17700	Silver-seed gourd	carcpiB0203
CSPI03G17700	Silver-seed gourd	carcpiB0799
CSPI03G17700	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G17700	Watermelon (97103) v2	cpiwmbB221
CSPI03G17700	Wax gourd	cpiwgoB283
CSPI03G17700	Cucumber (Gy14) v1	cgycpiB133
CSPI03G17700	Cucurbita maxima (Rimu)	cmacpiB247
CSPI03G17700	Cucurbita maxima (Rimu)	cmacpiB461
CSPI03G17700	Cucurbita moschata (Rifu)	cmocpiB235
CSPI03G17700	Cucurbita moschata (Rifu)	cmocpiB449
CSPI03G17700	Melon (DHL92) v3.5.1	cpimeB241
CSPI03G17700	Watermelon (Charleston Gray)	cpiwcgB237
CSPI03G17700	Cucurbita pepo (Zucchini)	cpecpiB551
CSPI03G17700	Cucurbita pepo (Zucchini)	cpecpiB605
CSPI03G17700	Bottle gourd (USVL1VR-Ls)	cpilsiB209