Csa3G187280 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G187280
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNicastrin; contains IPR008710 (Nicastrin)
LocationChr3 : 13203703 .. 13205989 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAATCAGTATAACTTTCCCGTTTTCTTAATATCTGAGAGCAGCATTTCGTCTATACAAGAAGTAATTCTGATTCTTAAACGCTTAAAACTTTAAACTCTAAGTTGTTTCAATTACTATACAACAGTTTGGCTCAGTTGCTATATGCTTCTCTCTGGAATTGAATTTTTATTTTGACTTGTCTAAATGGTACCTCTTAGATGTTCTTTAATGGTGCACATGCCCTATTTGTCATTAAAATAAGGTCATATTGTGCTTTTATAATTCTTATAAAATGTTACACAGAGGGCTTTGCATCATCTTTTTTCCTATAAAATCATCTTGTTTCTGATTTCTTGGTTTGGTTAGGGAGCTTGGTGTCCTTTTCATTTGGGTTTTGTCGTTTTTTGTTCAATAGAAAAACAATGGAGGTTGCCTCTATGTATCTTACTTGATGAGTAAGAGTTCAGTTTTAGGTTGGGAAGAAGGGGTAGTCGTGTTTGGAATCCTAATCCTCTCGAGGGTATTTCTTGTAGATCTTTTTTATGGTTGTTGTTGGATCCTTCTCCTGCTATTGAGCCGGTCTTTGATGTGCTTTGGAGGGTTAAGGTCCCTAAAAAAGTTAAGTTCTTTACTTGGGTGTGTGAACTCTCTGGATAAGCTTTTGAGGAAGAAGTGTACAGTTATGGGGCATTTCTGTTCTATTTTTTGCTGGAAGACCTGGATCACCTTCTCTAGAGTTGTCAGTTTACGTGAGTGGTGTGCAATTGTTTCTTTCAAGAGTTGATCCGAGTGCTTGGGTGACGATTGAGGAGTTTCTTCTCCATATGCCTTTCAAGGAGAAAGCTTGATCTTTATTGAGGATATCTAGAGGCAAAGAAACAATAGAGTGTAAAGGTGTGGAGAGGGACCATGGTGATGTTTGATCCTTGCTGAGGTTCCATGTTTCTCTATGGGAACCTGTTTCAAAGACGTTTTGTGATTATCCTCTAGGTAGTATCTTAGCTAGAAACCCTTTCTTTAGAGGGGTATTGTGGACTTGGTTTTTGTGGCCCTTGTATTATTTCATTTTTTTTCTCGACGAAAATAGTTGTTTTTATTAGAAAAAAAGAATCTACTGTTACAGATCATGATTCTATGTTGATTTATGTGCTCCCGTAGCTTTATTTTGCTTGATTAGATGCCCTTCTTTTAGGTTGCGTCCTTTTTTTGGGACTTTTCTTCTTTTCTTCTTCTTAATGTTTATTATTATTATTATTCTTTTAAGTGTGGTTATTGATCACAAAGCTGAAACACAGTGTGATAAGCAAAAAGTAGAAATGTTTTTGAACAAGTGCATTTTTACCAGGGTGGAAATTCATTGATGTTTTACAATTTTGTTTTCATAATGAACAAAAAGAGGATACCTTTAGTTTATATATTTTTTTAAGGTACAGTACTTATGGTGGTATAAACAAGGACATCATTTTTGATTTATGGTTGATGCTTCTTTTGTAATTGACCATAAGTTTGATCCAGTTAAATGCTTTCATGCTTAATATCAATTATGTGAATAACTATGACTAAAATAATTTATTTTGTTGCGTAAACTTACCACTTGATGCAGGCTGCTTCAAAAAATGTGAAGAGTAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGGTACTTAGTTTTGGTGTTACATTATGATTTTGTTTCATTGATTTTATATCTTAAATGTGTTATTTATTTACTCACAGTTTGCAAGGTCTGTGTGATTGTTTTTTTCATCTTTCCCTAGACAACTAAGGCTGGAACTCATAGTTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGGTTAGTTTTACTTGAATCTTTCTGTCTCCACATAATTTCGCACTGTTTATTTTATTAAAAGAGATCAGTATCGTTACAGTGTTTGGTCATCACTTCCCCCAATCAACACTTCTTCCTCAGATCAGTCTAAGCCTGTCATTCTCACGGTAGCTTCCATGGATTCGGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCTGACTCCCCCATCTCTGTATGATTTATTTTGAGCATGTATATCAGTCATAACTCTTACCTTGTTTGTTCTGCTACCCGTTAAAGCTTTTTTTGGTACATTTTAGGGCCTGATTGCGTTGCTGGCTGCAGTTGATGCACTTTCCCATGTGGATGGGTTGGACGATCTTCATAAACAGGTTCTTATTGAAGCTGTTTTCTTTGTATATAATTGCACTTTCCTTATATTAAGAGCTTCCTAA

mRNA sequence

ATGTGGAATCAGTATAACTTTCCCGTTTTCTTAATATCTGAGAGCAGCATTTCGTCTATACAAGAAGCTGCTTCAAAAAATGTGAAGAGTAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGACAACTAAGGCTGGAACTCATAGTTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTTTGGTCATCACTTCCCCCAATCAACACTTCTTCCTCAGATCAGTCTAAGCCTGTCATTCTCACGGTAGCTTCCATGGATTCGGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCTGACTCCCCCATCTCTGGCCTGATTGCGTTGCTGGCTGCAGTTGATGCACTTTCCCATGTGGATGGGTTGGACGATCTTCATAAACAGGTTCTTATTGAAGCTGTTTTCTTTGTATATAATTGCACTTTCCTTATATTAAGAGCTTCCTAA

Coding sequence (CDS)

ATGTGGAATCAGTATAACTTTCCCGTTTTCTTAATATCTGAGAGCAGCATTTCGTCTATACAAGAAGCTGCTTCAAAAAATGTGAAGAGTAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGACAACTAAGGCTGGAACTCATAGTTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTTTGGTCATCACTTCCCCCAATCAACACTTCTTCCTCAGATCAGTCTAAGCCTGTCATTCTCACGGTAGCTTCCATGGATTCGGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCTGACTCCCCCATCTCTGGCCTGATTGCGTTGCTGGCTGCAGTTGATGCACTTTCCCATGTGGATGGGTTGGACGATCTTCATAAACAGGTTCTTATTGAAGCTGTTTTCTTTGTATATAATTGCACTTTCCTTATATTAAGAGCTTCCTAA

Protein sequence

MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQVLIEAVFFVYNCTFLILRAS*
Homology
[Close]
BLAST of Csa3G187280 vs. Swiss-Prot
Match: NICA_ARATH (Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.4e-51
Identity = 97/141 (68.79%), Postives = 115/141 (81.56%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPV+L+SES IS++ E  SK       Y S+VAEF++VM+TTKAGTH+S +CL+
Sbjct: 163 MWRNYNFPVYLLSESGISAVHEILSKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQ 222

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           E TCLPLGGYSVWSSLPPI+ SSS+  KPV+LTVASMD+ASFFRDKS GADSPISGL+AL
Sbjct: 223 EGTCLPLGGYSVWSSLPPISVSSSNNRKPVVLTVASMDTASFFRDKSFGADSPISGLVAL 282

Query: 121 LAAVDALSHVDGLDDLHKQVL 142
           L AVDALS VDG+ +L KQ++
Sbjct: 283 LGAVDALSRVDGISNLKKQLV 303

[Close]
BLAST of Csa3G187280 vs. Swiss-Prot
Match: NICA_DICDI (Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 9.5e-11
Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 1 

Query: 5   YNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETC 64
           + FP+F +   +   I+  ++ N   K  Y +  AE D  MQ    G  ++ +CL+   C
Sbjct: 155 FPFPMFALELKTSIIIRNLSTINRDGK--YPAYGAELDSFMQ----GAINAETCLRRGFC 214

Query: 65  LPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAV 124
            P+GG S+WSS   +     DQSKP+IL +  +D+ +FFRD + G D     L  LL+ +
Sbjct: 215 EPVGGQSIWSSFSEV----IDQSKPIILVMLPIDATAFFRDLATGTDQSGYALTVLLSML 271

Query: 125 DALSHVD 132
           + L  VD
Sbjct: 275 NTLQGVD 271

[Close]
BLAST of Csa3G187280 vs. Swiss-Prot
Match: NICA_RAT (Nicastrin OS=Rattus norvegicus GN=Ncstn PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.4e-08
Identity = 42/162 (25.93%), Postives = 76/162 (46.91%), Query Frame = 1 

Query: 2   WNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTH---SSMSC 61
           ++ ++FP+FL+ + + + + +   ++    ++   +   F L      +  H   S+ +C
Sbjct: 172 YDDFSFPIFLLEDENETKVIKQCYQDHNLGQN--GSAPSFPLCAMQLFSHMHAVISTATC 231

Query: 62  LK------------EETCLPLGGYSVWSSLPPINTSSS-DQSKPVILTVASMDSASFFRD 121
           ++            E  C PL  Y+VWS L PINTS   +    V++    +DS SFF +
Sbjct: 232 MRRSFIQSTFSINPEIVCDPLSDYNVWSMLKPINTSGGLEPDVRVVVAATRLDSRSFFWN 291

Query: 122 KSIGADSPISGLIALLAAVDALSHVDGLDDLHKQVLIEAVFF 148
            + GA+S ++  +  LAA +AL     +  L + V+   VFF
Sbjct: 292 VAPGAESAVASFVTQLAAAEALHKAPDVTTLPRNVMF--VFF 329

[Close]
BLAST of Csa3G187280 vs. Swiss-Prot
Match: NICA_MOUSE (Nicastrin OS=Mus musculus GN=Ncstn PE=1 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 7.5e-08
Identity = 42/162 (25.93%), Postives = 75/162 (46.30%), Query Frame = 1 

Query: 2   WNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTH---SSMSC 61
           +  ++FP+FL+ + + + + +   ++    ++   +   F L      +  H   S+ +C
Sbjct: 172 YEDFSFPIFLLEDENETKVIKQCYQDHNLGQN--GSAPSFPLCAMQLFSHMHAVISTATC 231

Query: 62  LK------------EETCLPLGGYSVWSSLPPINTSSS-DQSKPVILTVASMDSASFFRD 121
           ++            E  C PL  Y+VWS L PINTS   +    V++    +DS SFF +
Sbjct: 232 MRRSFIQSTFSINPEIVCDPLSDYNVWSMLKPINTSVGLEPDVRVVVAATRLDSRSFFWN 291

Query: 122 KSIGADSPISGLIALLAAVDALSHVDGLDDLHKQVLIEAVFF 148
            + GA+S ++  +  LAA +AL     +  L + V+   VFF
Sbjct: 292 VAPGAESAVASFVTQLAAAEALHKAPDVTTLSRNVMF--VFF 329

[Close]
BLAST of Csa3G187280 vs. Swiss-Prot
Match: NICA_HUMAN (Nicastrin OS=Homo sapiens GN=NCSTN PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-08
Identity = 40/160 (25.00%), Postives = 74/160 (46.25%), Query Frame = 1 

Query: 2   WNQYNFPVFLISESSISSIQEAASKNVKSKKD---------YISNVAEFDLVMQTT---- 61
           +  ++FP+FL+ + + + + +   ++    ++          +   +    V+ T     
Sbjct: 173 YEDFSFPIFLLEDENETKVIKQCYQDHNLSQNGSAPTFPLCAMQLFSHMHAVISTATCMR 232

Query: 62  KAGTHSSMSCLKEETCLPLGGYSVWSSLPPINTSSS-DQSKPVILTVASMDSASFFRDKS 121
           ++   S+ S   E  C PL  Y+VWS L PINT+ +      V++    +DS SFF + +
Sbjct: 233 RSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKPDDRVVVAATRLDSRSFFWNVA 292

Query: 122 IGADSPISGLIALLAAVDALSHVDGLDDLHKQVLIEAVFF 148
            GA+S ++  +  LAA +AL     +  L + V+   VFF
Sbjct: 293 PGAESAVASFVTQLAAAEALQKAPDVTTLPRNVMF--VFF 330

[Close]
BLAST of Csa3G187280 vs. TrEMBL
Match: A0A0A0L8Z5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187280 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 2.5e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120

Query: 121 LAAVDALSHVDGLDDLHKQVLIEAVFFVYNCTFLILRAS 160
           LAAVDALSHVDGLDDLHKQVLIEAVFFVYNCTFLILRAS
Sbjct: 121 LAAVDALSHVDGLDDLHKQVLIEAVFFVYNCTFLILRAS 159

[Close]
BLAST of Csa3G187280 vs. TrEMBL
Match: D7TSK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.2e-58
Identity = 116/149 (77.85%), Postives = 132/149 (88.59%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWN YNFP+FL+S+SS  ++QE A KN K+KK Y ++VAEFDLVMQTTK+GTH S SCLK
Sbjct: 159 MWNTYNFPMFLLSQSSTLTLQEVAIKNEKNKKAYTADVAEFDLVMQTTKSGTHDSESCLK 218

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPIN SSSDQSKPVILTVASMDSASFFRDKS+GADSPISGLI+L
Sbjct: 219 EETCLPLGGYSVWSSLPPINVSSSDQSKPVILTVASMDSASFFRDKSLGADSPISGLISL 278

Query: 121 LAAVDALSHVDGLDDLHKQVLIEAVFFVY 150
           +AAVDALSH+DGL+DL KQ+    VF V+
Sbjct: 279 MAAVDALSHLDGLNDLSKQL----VFLVF 303

[Close]
BLAST of Csa3G187280 vs. TrEMBL
Match: A0A0D2TXR1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57
Identity = 114/149 (76.51%), Postives = 132/149 (88.59%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPVFL+SESS S++QE A KN K++K Y +NVAEFD+VMQTTK GTH S SCLK
Sbjct: 156 MWKSYNFPVFLLSESSTSTLQEIAMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLK 215

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWS++PPIN SSS+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+L
Sbjct: 216 EETCLPLGGYSVWSAVPPINNSSSNQSKPIILTVASMDAASFFRDKSLGADSPISGLISL 275

Query: 121 LAAVDALSHVDGLDDLHKQVLIEAVFFVY 150
           LAAVDALSHVDGLD+L+KQ+    VF V+
Sbjct: 276 LAAVDALSHVDGLDNLNKQL----VFLVF 300

[Close]
BLAST of Csa3G187280 vs. TrEMBL
Match: A0A0D2TUA9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57
Identity = 114/149 (76.51%), Postives = 132/149 (88.59%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPVFL+SESS S++QE A KN K++K Y +NVAEFD+VMQTTK GTH S SCLK
Sbjct: 158 MWKSYNFPVFLLSESSTSTLQEIAMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLK 217

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWS++PPIN SSS+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+L
Sbjct: 218 EETCLPLGGYSVWSAVPPINNSSSNQSKPIILTVASMDAASFFRDKSLGADSPISGLISL 277

Query: 121 LAAVDALSHVDGLDDLHKQVLIEAVFFVY 150
           LAAVDALSHVDGLD+L+KQ+    VF V+
Sbjct: 278 LAAVDALSHVDGLDNLNKQL----VFLVF 302

[Close]
BLAST of Csa3G187280 vs. TrEMBL
Match: A0A0D2UWB7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-57
Identity = 114/149 (76.51%), Postives = 132/149 (88.59%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPVFL+SESS S++QE A KN K++K Y +NVAEFD+VMQTTK GTH S SCLK
Sbjct: 158 MWKSYNFPVFLLSESSTSTLQEIAMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLK 217

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWS++PPIN SSS+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+L
Sbjct: 218 EETCLPLGGYSVWSAVPPINNSSSNQSKPIILTVASMDAASFFRDKSLGADSPISGLISL 277

Query: 121 LAAVDALSHVDGLDDLHKQVLIEAVFFVY 150
           LAAVDALSHVDGLD+L+KQ+    VF V+
Sbjct: 278 LAAVDALSHVDGLDNLNKQL----VFLVF 302

[Close]
BLAST of Csa3G187280 vs. TAIR10
Match: AT3G52640.2 (AT3G52640.2 Zn-dependent exopeptidases superfamily protein)

HSP 1 Score: 201.1 bits (510), Expect = 5.3e-52
Identity = 97/141 (68.79%), Postives = 115/141 (81.56%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MW  YNFPV+L+SES IS++ E  SK       Y S+VAEF++VM+TTKAGTH+S +CL+
Sbjct: 163 MWRNYNFPVYLLSESGISAVHEILSKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQ 222

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           E TCLPLGGYSVWSSLPPI+ SSS+  KPV+LTVASMD+ASFFRDKS GADSPISGL+AL
Sbjct: 223 EGTCLPLGGYSVWSSLPPISVSSSNNRKPVVLTVASMDTASFFRDKSFGADSPISGLVAL 282

Query: 121 LAAVDALSHVDGLDDLHKQVL 142
           L AVDALS VDG+ +L KQ++
Sbjct: 283 LGAVDALSRVDGISNLKKQLV 303

[Close]
BLAST of Csa3G187280 vs. NCBI nr
Match: gi|700202321|gb|KGN57454.1| (hypothetical protein Csa_3G187280 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 3.5e-82
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120

Query: 121 LAAVDALSHVDGLDDLHKQVLIEAVFFVYNCTFLILRAS 160
           LAAVDALSHVDGLDDLHKQVLIEAVFFVYNCTFLILRAS
Sbjct: 121 LAAVDALSHVDGLDDLHKQVLIEAVFFVYNCTFLILRAS 159

[Close]
BLAST of Csa3G187280 vs. NCBI nr
Match: gi|449445945|ref|XP_004140732.1| (PREDICTED: nicastrin [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 2.2e-71
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 154 MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 213

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 214 EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 273

Query: 121 LAAVDALSHVDGLDDLHKQVLIEAVF 147
           LAAVDALSHVDGLDDLHKQ L+ AVF
Sbjct: 274 LAAVDALSHVDGLDDLHKQ-LVFAVF 298

[Close]
BLAST of Csa3G187280 vs. NCBI nr
Match: gi|659114563|ref|XP_008457115.1| (PREDICTED: nicastrin isoform X1 [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-70
Identity = 137/141 (97.16%), Postives = 141/141 (100.00%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWN+YNFPVFLISESSISSIQEAASKNVKSKKDY+SNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 172 MWNRYNFPVFLISESSISSIQEAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLK 231

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 232 EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 291

Query: 121 LAAVDALSHVDGLDDLHKQVL 142
           LAAVDALSHVDGLDDLHKQ++
Sbjct: 292 LAAVDALSHVDGLDDLHKQLV 312

[Close]
BLAST of Csa3G187280 vs. NCBI nr
Match: gi|659114565|ref|XP_008457117.1| (PREDICTED: nicastrin isoform X2 [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-70
Identity = 137/141 (97.16%), Postives = 141/141 (100.00%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWN+YNFPVFLISESSISSIQEAASKNVKSKKDY+SNVAEFDLVMQTTKAGTHSSMSCLK
Sbjct: 172 MWNRYNFPVFLISESSISSIQEAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLK 231

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL
Sbjct: 232 EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 291

Query: 121 LAAVDALSHVDGLDDLHKQVL 142
           LAAVDALSHVDGLDDLHKQ++
Sbjct: 292 LAAVDALSHVDGLDDLHKQLV 312

[Close]
BLAST of Csa3G187280 vs. NCBI nr
Match: gi|225451381|ref|XP_002264144.1| (PREDICTED: nicastrin [Vitis vinifera])

HSP 1 Score: 232.3 bits (591), Expect = 6.1e-58
Identity = 116/149 (77.85%), Postives = 132/149 (88.59%), Query Frame = 1 

Query: 1   MWNQYNFPVFLISESSISSIQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLK 60
           MWN YNFP+FL+S+SS  ++QE A KN K+KK Y ++VAEFDLVMQTTK+GTH S SCLK
Sbjct: 159 MWNTYNFPMFLLSQSSTLTLQEVAIKNEKNKKAYTADVAEFDLVMQTTKSGTHDSESCLK 218

Query: 61  EETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIAL 120
           EETCLPLGGYSVWSSLPPIN SSSDQSKPVILTVASMDSASFFRDKS+GADSPISGLI+L
Sbjct: 219 EETCLPLGGYSVWSSLPPINVSSSDQSKPVILTVASMDSASFFRDKSLGADSPISGLISL 278

Query: 121 LAAVDALSHVDGLDDLHKQVLIEAVFFVY 150
           +AAVDALSH+DGL+DL KQ+    VF V+
Sbjct: 279 MAAVDALSHLDGLNDLSKQL----VFLVF 303

The following BLAST results are available for this feature:
BLAST of Csa3G187280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NICA_ARATH9.4e-5168.79Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1[more]
NICA_DICDI9.5e-1133.86Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2[more]
NICA_RAT4.4e-0825.93Nicastrin OS=Rattus norvegicus GN=Ncstn PE=1 SV=1[more]
NICA_MOUSE7.5e-0825.93Nicastrin OS=Mus musculus GN=Ncstn PE=1 SV=3[more]
NICA_HUMAN9.9e-0825.00Nicastrin OS=Homo sapiens GN=NCSTN PE=1 SV=2[more]
BLAST of Csa3G187280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8Z5_CUCSA2.5e-82100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187280 PE=4 SV=1[more]
D7TSK0_VITVI4.2e-5877.85Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=... [more]
A0A0D2TXR1_GOSRA1.2e-5776.51Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1[more]
A0A0D2TUA9_GOSRA1.2e-5776.51Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1[more]
A0A0D2UWB7_GOSRA1.2e-5776.51Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1[more]
BLAST of Csa3G187280 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G52640.25.3e-5268.79 Zn-dependent exopeptidases superfamily protein[more]
BLAST of Csa3G187280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202321|gb|KGN57454.1|3.5e-82100.00hypothetical protein Csa_3G187280 [Cucumis sativus][more]
gi|449445945|ref|XP_004140732.1|2.2e-7197.95PREDICTED: nicastrin [Cucumis sativus][more]
gi|659114563|ref|XP_008457115.1|2.4e-7097.16PREDICTED: nicastrin isoform X1 [Cucumis melo][more]
gi|659114565|ref|XP_008457117.1|2.4e-7097.16PREDICTED: nicastrin isoform X2 [Cucumis melo][more]
gi|225451381|ref|XP_002264144.1|6.1e-5877.85PREDICTED: nicastrin [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008710Nicastrin
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016485protein processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016485 protein processing
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005798 Golgi-associated vesicle
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005887 integral component of plasma membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0004175 endopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G187280.1Csa3G187280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008710NicastrinPANTHERPTHR21092NICASTRINcoord: 1..141
score: 5.5
IPR008710NicastrinPFAMPF05450Nicastrincoord: 89..142
score: 3.9
NoneNo IPR availablePANTHERPTHR21092:SF0NICASTRINcoord: 1..141
score: 5.5
NoneNo IPR availableunknownSSF53187Zn-dependent exopeptidasescoord: 62..128
score: 6.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G187280Cla013144Watermelon (97103) v1cuwmB243
Csa3G187280CSPI03G17700Wild cucumber (PI 183967)cpicuB120
Csa3G187280CsGy3G017700Cucumber (Gy14) v2cgybcuB109
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G187280Melon (DHL92) v3.6.1cumedB238
Csa3G187280Silver-seed gourdcarcuB0196
Csa3G187280Silver-seed gourdcarcuB0781
Csa3G187280Watermelon (97103) v2cuwmbB215
Csa3G187280Wax gourdcuwgoB283
Csa3G187280Cucumber (Gy14) v1cgycuB132
Csa3G187280Cucurbita maxima (Rimu)cmacuB245
Csa3G187280Cucurbita maxima (Rimu)cmacuB458
Csa3G187280Cucurbita moschata (Rifu)cmocuB232
Csa3G187280Cucurbita moschata (Rifu)cmocuB445
Csa3G187280Melon (DHL92) v3.5.1cumeB251
Csa3G187280Watermelon (Charleston Gray)cuwcgB230
Csa3G187280Cucurbita pepo (Zucchini)cpecuB550
Csa3G187280Cucurbita pepo (Zucchini)cpecuB603
Csa3G187280Bottle gourd (USVL1VR-Ls)culsiB211