Cla013144.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013144
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Nicastrin (AHRD V1 ***- F4J819_ARATH); contains Interpro domain(s) IPR008710 Nicastrin
Location	Chr5 : 11512341 .. 11513411 (+)
Sequence length	405

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGACGTTTCTTATGTAATTGACCATAAGCTCGGTCCATTTAAGTGCTTTCATGTTTAATAGATAATTATGTGCATAACTATGACTAAAATAATTTATTCTGTTGCATAATCTTACCACTTAATGCAGGCTGCTTCAAAAAATGTGAAGAATAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGGTACTTAGTTTCTGGTGTTACATTCTGATTACATTTCAGTGATTTCACATCTTAAATGGTTATTTTAATCTCAGTATGCAAGGTCTGTGTAATTGATTTTTTTATTTTATTTTAATTTTTTCCCCTTCCCTAGACAACTAAGGCTGGAACTCATAATTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGGTTAAGTTTTACTGTTTTACATATTTTTTTTTCCCTCTCTTTATTTATTTATTTATTTTTTATTATTATTACGATTTTGTCTCCATATAGTTTTACAATCTCACTGTGTTTATTTTATTAAAAGAGATAAGTATCTTTACAGTGTCTGGTCATCACTCCCTCCAATCAATACTTCTTCCTCTGATCAGTCTAAGCCCGTCATTCTCACAGTAGCTTCAATGGATTCTGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCAGACTCCCCCATCTCTGTATGATTTATTTTGAGCAAGTATATCAGTCATAAACCGTACCATCTTTGTTCTGCTACCCGTTAAAGTTGGTTTTGGTACATTTTAGGGCCTGATTACGTTGCTGGCTGCAGTTGATGCCCTTTCCCATGTGGATGGATTGGATGATCTTCATAAACAGGTTCTTATTGAAGCTTCCTTGTTTTTTTTTTTTTTGAGATAAGTTCTTATTGAAGCTGTTTTCTTTGTATCTAGTTGCACTGTCTTTATATAAGAGCTTACTAACTGAAATGGAAATATTCTATAATTTTTTTTTGTCTACATAGCTGTATTTTGGACTTATTTAAACTTAATCCTTCCCTTTTCATAGAGGATCAAAGCCTTAGTTACGACCTGTCTAAATTAA

mRNA sequence

ATGGTTGACGTTTCTTATGCTGCTTCAAAAAATGTGAAGAATAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGACAACTAAGGCTGGAACTCATAATTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTCTGGTCATCACTCCCTCCAATCAATACTTCTTCCTCTGATCAGTCTAAGCCCGTCATTCTCACAGTAGCTTCAATGGATTCTGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCAGACTCCCCCATCTCTGGCCTGATTACGTTGCTGGCTGCAGTTGATGCCCTTTCCCATGTGGATGGATTGGATGATCTTCATAAACAGAGGATCAAAGCCTTAGTTACGACCTGTCTAAATTAA

Coding sequence (CDS)

ATGGTTGACGTTTCTTATGCTGCTTCAAAAAATGTGAAGAATAAGAAAGATTACATATCTAATGTTGCTGAATTTGATCTGGTGATGCAGACAACTAAGGCTGGAACTCATAATTCAATGTCTTGTTTGAAAGAAGAAACATGCCTTCCATTAGGTGGATACAGTGTCTGGTCATCACTCCCTCCAATCAATACTTCTTCCTCTGATCAGTCTAAGCCCGTCATTCTCACAGTAGCTTCAATGGATTCTGCCTCTTTCTTCCGTGATAAAAGCATTGGTGCAGACTCCCCCATCTCTGGCCTGATTACGTTGCTGGCTGCAGTTGATGCCCTTTCCCATGTGGATGGATTGGATGATCTTCATAAACAGAGGATCAAAGCCTTAGTTACGACCTGTCTAAATTAA

Protein sequence

MVDVSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKALVTTCLN

Homology

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_ARATH (Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-41
Identity = 84/122 (68.85%), Postives = 98/122 (80.33%), Query Frame = 1


Query: 9   SKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSSS 68
           SK       Y S+VAEF++VM+TTKAGTHNS +CL+E TCLPLGGYSVWSSLPPI+ SSS
Sbjct: 187 SKKKMKHGTYTSDVAEFNMVMETTKAGTHNSEACLQEGTCLPLGGYSVWSSLPPISVSSS 246

Query: 69  DQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKAL 128
           +  KPV+LTVASMD+ASFFRDKS GADSPISGL+ LL AVDALS VDG+ +L KQ +  +
Sbjct: 247 NNRKPVVLTVASMDTASFFRDKSFGADSPISGLVALLGAVDALSRVDGISNLKKQLVFLV 306

Query: 129 VT 131
           +T
Sbjct: 307 LT 308

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_DICDI (Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 4.0e-10
Identity = 37/93 (39.78%), Postives = 50/93 (53.76%), Query Frame = 1


Query: 23  AEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSSSDQSKPVILTVASMD 82
           AE D  MQ    G  N+ +CL+   C P+GG S+WSS   +     DQSKP+IL +  +D
Sbjct: 187 AELDSFMQ----GAINAETCLRRGFCEPVGGQSIWSSFSEV----IDQSKPIILVMLPID 246

Query: 83  SASFFRDKSIGADSPISGLITLLAAVDALSHVD 116
           + +FFRD + G D     L  LL+ ++ L  VD
Sbjct: 247 ATAFFRDLATGTDQSGYALTVLLSMLNTLQGVD 271

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_RAT (Nicastrin OS=Rattus norvegicus GN=Ncstn PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.1e-07
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 1


Query: 38  NSMSCLKEETCLPLGGYSVWSSLPPINTSSS-DQSKPVILTVASMDSASFFRDKSIGADS 97
           ++ S   E  C PL  Y+VWS L PINTS   +    V++    +DS SFF + + GA+S
Sbjct: 237 STFSINPEIVCDPLSDYNVWSMLKPINTSGGLEPDVRVVVAATRLDSRSFFWNVAPGAES 296

Query: 98  PISGLITLLAAVDAL 112
            ++  +T LAA +AL
Sbjct: 297 AVASFVTQLAAAEAL 311

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_HUMAN (Nicastrin OS=Homo sapiens GN=NCSTN PE=1 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-07
Identity = 29/80 (36.25%), Postives = 44/80 (55.00%), Query Frame = 1


Query: 33  KAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSSS-DQSKPVILTVASMDSASFFRDKS 92
           ++   ++ S   E  C PL  Y+VWS L PINT+ +      V++    +DS SFF + +
Sbjct: 233 RSSIQSTFSINPEIVCDPLSDYNVWSMLKPINTTGTLKPDDRVVVAATRLDSRSFFWNVA 292

Query: 93  IGADSPISGLITLLAAVDAL 112
            GA+S ++  +T LAA +AL
Sbjct: 293 PGAESAVASFVTQLAAAEAL 312

[Close]

BLAST of Cla013144 vs. Swiss-Prot
Match: NICA_MOUSE (Nicastrin OS=Mus musculus GN=Ncstn PE=1 SV=3)

HSP 1 Score: 55.1 bits (131), Expect = 7.0e-07
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 1


Query: 38  NSMSCLKEETCLPLGGYSVWSSLPPINTSSS-DQSKPVILTVASMDSASFFRDKSIGADS 97
           ++ S   E  C PL  Y+VWS L PINTS   +    V++    +DS SFF + + GA+S
Sbjct: 237 STFSINPEIVCDPLSDYNVWSMLKPINTSVGLEPDVRVVVAATRLDSRSFFWNVAPGAES 296

Query: 98  PISGLITLLAAVDAL 112
            ++  +T LAA +AL
Sbjct: 297 AVASFVTQLAAAEAL 311

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: A0A0A0L8Z5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187280 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-56
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDYISNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 20  IQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 79

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 80  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 139

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: D7TSK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.1e-49
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN KNKK Y ++VAEFDLVMQTTK+GTH+S SCLKEETCLPLGGYSVWSSLPPIN SS
Sbjct: 182 AIKNEKNKKAYTADVAEFDLVMQTTKSGTHDSESCLKEETCLPLGGYSVWSSLPPINVSS 241

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           SDQSKPVILTVASMDSASFFRDKS+GADSPISGLI+L+AAVDALSH+DGL+DL KQ +  
Sbjct: 242 SDQSKPVILTVASMDSASFFRDKSLGADSPISGLISLMAAVDALSHLDGLNDLSKQLVFL 301

Query: 128 LVT 131
           + T
Sbjct: 302 VFT 304

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: A0A0D2TXR1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-47
Identity = 96/123 (78.05%), Postives = 111/123 (90.24%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN K +K Y +NVAEFD+VMQTTK GTH+S SCLKEETCLPLGGYSVWS++PPIN SS
Sbjct: 179 AMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLKEETCLPLGGYSVWSAVPPINNSS 238

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           S+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+LLAAVDALSHVDGLD+L+KQ +  
Sbjct: 239 SNQSKPIILTVASMDAASFFRDKSLGADSPISGLISLLAAVDALSHVDGLDNLNKQLVFL 298

Query: 128 LVT 131
           + T
Sbjct: 299 VFT 301

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: A0A0D2TUA9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-47
Identity = 96/123 (78.05%), Postives = 111/123 (90.24%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN K +K Y +NVAEFD+VMQTTK GTH+S SCLKEETCLPLGGYSVWS++PPIN SS
Sbjct: 181 AMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLKEETCLPLGGYSVWSAVPPINNSS 240

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           S+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+LLAAVDALSHVDGLD+L+KQ +  
Sbjct: 241 SNQSKPIILTVASMDAASFFRDKSLGADSPISGLISLLAAVDALSHVDGLDNLNKQLVFL 300

Query: 128 LVT 131
           + T
Sbjct: 301 VFT 303

[Close]

BLAST of Cla013144 vs. TrEMBL
Match: A0A0D2UWB7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-47
Identity = 96/123 (78.05%), Postives = 111/123 (90.24%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN K +K Y +NVAEFD+VMQTTK GTH+S SCLKEETCLPLGGYSVWS++PPIN SS
Sbjct: 181 AMKNEKTEKAYTTNVAEFDVVMQTTKVGTHDSESCLKEETCLPLGGYSVWSAVPPINNSS 240

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           S+QSKP+ILTVASMD+ASFFRDKS+GADSPISGLI+LLAAVDALSHVDGLD+L+KQ +  
Sbjct: 241 SNQSKPIILTVASMDAASFFRDKSLGADSPISGLISLLAAVDALSHVDGLDNLNKQLVFL 300

Query: 128 LVT 131
           + T
Sbjct: 301 VFT 303

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|449445945|ref|XP_004140732.1| (PREDICTED: nicastrin [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 2.5e-57
Identity = 116/127 (91.34%), Postives = 121/127 (95.28%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDYISNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 173 IQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 232

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 233 NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 292

Query: 124 RIKALVT 131
            + A+ T
Sbjct: 293 LVFAVFT 299

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|659114563|ref|XP_008457115.1| (PREDICTED: nicastrin isoform X1 [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 9.6e-57
Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDY+SNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 191 IQEAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 250

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 251 NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 310

Query: 124 RIKALVT 131
            +  + T
Sbjct: 311 LVFVVFT 317

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|659114565|ref|XP_008457117.1| (PREDICTED: nicastrin isoform X2 [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 9.6e-57
Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDY+SNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 191 IQEAASKNVKSKKDYVSNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 250

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 251 NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 310

Query: 124 RIKALVT 131
            +  + T
Sbjct: 311 LVFVVFT 317

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|700202321|gb|KGN57454.1| (hypothetical protein Csa_3G187280 [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-56
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 1


Query: 4   VSYAASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPI 63
           +  AASKNVK+KKDYISNVAEFDLVMQTTKAGTH+SMSCLKEETCLPLGGYSVWSSLPPI
Sbjct: 20  IQEAASKNVKSKKDYISNVAEFDLVMQTTKAGTHSSMSCLKEETCLPLGGYSVWSSLPPI 79

Query: 64  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQ 123
           NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLI LLAAVDALSHVDGLDDLHKQ
Sbjct: 80  NTSSSDQSKPVILTVASMDSASFFRDKSIGADSPISGLIALLAAVDALSHVDGLDDLHKQ 139

[Close]

BLAST of Cla013144 vs. NCBI nr
Match: gi|225451381|ref|XP_002264144.1| (PREDICTED: nicastrin [Vitis vinifera])

HSP 1 Score: 201.8 bits (512), Expect = 7.4e-49
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 1


Query: 8   ASKNVKNKKDYISNVAEFDLVMQTTKAGTHNSMSCLKEETCLPLGGYSVWSSLPPINTSS 67
           A KN KNKK Y ++VAEFDLVMQTTK+GTH+S SCLKEETCLPLGGYSVWSSLPPIN SS
Sbjct: 182 AIKNEKNKKAYTADVAEFDLVMQTTKSGTHDSESCLKEETCLPLGGYSVWSSLPPINVSS 241

Query: 68  SDQSKPVILTVASMDSASFFRDKSIGADSPISGLITLLAAVDALSHVDGLDDLHKQRIKA 127
           SDQSKPVILTVASMDSASFFRDKS+GADSPISGLI+L+AAVDALSH+DGL+DL KQ +  
Sbjct: 242 SDQSKPVILTVASMDSASFFRDKSLGADSPISGLISLMAAVDALSHLDGLNDLSKQLVFL 301

Query: 128 LVT 131
           + T
Sbjct: 302 VFT 304

The following BLAST results are available for this feature:

BLAST of Cla013144 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NICA_ARATH	1.5e-41	68.85	Nicastrin OS=Arabidopsis thaliana GN=At3g52640/At3g52650 PE=2 SV=1	[more]
NICA_DICDI	4.0e-10	39.78	Nicastrin OS=Dictyostelium discoideum GN=ncstn PE=3 SV=2	[more]
NICA_RAT	4.1e-07	40.00	Nicastrin OS=Rattus norvegicus GN=Ncstn PE=1 SV=1	[more]
NICA_HUMAN	7.0e-07	36.25	Nicastrin OS=Homo sapiens GN=NCSTN PE=1 SV=2	[more]
NICA_MOUSE	7.0e-07	40.00	Nicastrin OS=Mus musculus GN=Ncstn PE=1 SV=3	[more]

BLAST of Cla013144 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Z5_CUCSA	1.1e-56	95.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G187280 PE=4 SV=1	[more]
D7TSK0_VITVI	5.1e-49	82.11	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g00380 PE=4 SV=...	[more]
A0A0D2TXR1_GOSRA	3.7e-47	78.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1	[more]
A0A0D2TUA9_GOSRA	3.7e-47	78.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1	[more]
A0A0D2UWB7_GOSRA	3.7e-47	78.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G304200 PE=4 SV=1	[more]

BLAST of Cla013144 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445945\|ref\|XP_004140732.1\|	2.5e-57	91.34	PREDICTED: nicastrin [Cucumis sativus]	[more]
gi\|659114563\|ref\|XP_008457115.1\|	9.6e-57	89.76	PREDICTED: nicastrin isoform X1 [Cucumis melo]	[more]
gi\|659114565\|ref\|XP_008457117.1\|	9.6e-57	89.76	PREDICTED: nicastrin isoform X2 [Cucumis melo]	[more]
gi\|700202321\|gb\|KGN57454.1\|	1.6e-56	95.00	hypothetical protein Csa_3G187280 [Cucumis sativus]	[more]
gi\|225451381\|ref\|XP_002264144.1\|	7.4e-49	82.11	PREDICTED: nicastrin [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008710	Nicastrin

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0016485	protein processing

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016485	protein processing
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005798	Golgi-associated vesicle
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla013144	Cla013144	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla013144	Cla013144.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla013144.1.cds1	Cla013144.1.cds1	CDS
Cla013144.1.cds2	Cla013144.1.cds2	CDS
Cla013144.1.cds3	Cla013144.1.cds3	CDS
Cla013144.1.cds4	Cla013144.1.cds4	CDS
Cla013144.1.cds5	Cla013144.1.cds5	CDS
Cla013144.1.cds6	Cla013144.1.cds6	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008710	Nicastrin	PANTHER	PTHR21092	NICASTRIN	coord: 13..123 score: 8.6
IPR008710	Nicastrin	PFAM	PF05450	Nicastrin	coord: 73..123 score: 6.5
None	No IPR available	PANTHER	PTHR21092:SF0	NICASTRIN	coord: 13..123 score: 8.6
None	No IPR available	unknown	SSF53187	Zn-dependent exopeptidases	coord: 42..112 score: 1.0