CmaCh16G012090 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCTTTCAAGGGCCATGTTCTTCCAGGGACGCTGTTTCTTCTGGTTGGTGTTTGGCACGTGTGGAGCGCTCTGCTTCGGTACGTGTCAAATCCCAACTTGTTTCGCGTCCGTGCGTGGAACCCTGTGCCTGGCTTCAATGGAAAGCTCAAATACTTAGAGCTTTATGTTGTTGTCATTGGCGGTTTCATTGATTTGTGCATTGAGCTTTTGTATTCAACTCATCTCAAGTTCTTCGTTAATGGAGTTTTGAACCCTTCGCACATGAACAACTTTGAACATTCGGGGATGCTTCTCATGTTCTTCATTTTTGGACTCGTCGCGCTGCTCTCTGAAAAGTCGAGGTAATTCTCTCTTGTTTCATGAACAAAGCATTTTCTATTCAGTGTTGTTTTAAAAGTTTTGGAAAATCTTGTAATGTTAACTTCTTCATTAAACTGTTTGATTACTTTTGTTAAGATCAGATGGGTATAAGTCATTACTGGATAAGATATAAAATTAATGGTGGGAAGTATTAGGATTTTCTTTCCGGAAGGAATTTAAACCCGCAAGGACAAGAACAGGTAGACGTGCCCCGGAGAGATATATCTTTCCTGAATTGATTTATTAAAAGTTCACGAGCCTTTTCTCTTGGTCTTGGAGTAGTTTGTTTATTTTAGATCATCAGGAAAGTGAATAAAGTGTCAGATTTAAGATGAAAAATACCGAGGTTTCATTCAATCATCTTAGGAACACACATGTATGGAAAACAATTGATATTAAATTGAAAGCAACAGCAGTTTCTTGTATATACGTCATAATTTAAGCTGTGTCGTTCTTGATCTTCGCTGGAAAGACAATTTTCTTCCCCCAATTTCTGCTATCTATCAGTTTGTAGGAGCTTGTAATCCAGAGTTTGAAGTGCATTGTTGTAACAGACCAAGCCCACCGCTAGTAGAAATTGTTTGCTTTGGTCCGTTACGTATCGCTATCAGTCTCATGGTTTTAAAACGCGTCTATTAGGGAGAGGTTTCCACACCCTTATAAGGAATGTTTTGTTTCCCTCTCCAACCGATGTGGGATCTCACAATCCACCCTTCTTGGGGACCAGCGTCCTCGCTGGCACATTGCACGATGCCTAGCTCTTATTCCATTTGTAACGGCCCAAACCCACCATTAGTAGATATTGTCCGCTTTGGCCTGTTACGTATCGCCGTCAGCCTCACGGTTTTAAAACGCGTCTACTAGGAAGAGATTTTCACACCGTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGATGTATAGGAGGGGAGGGGACATTTCTAAGTTGCACATCCCACATCCTCGCAGTCATAGTTGAAGATGGTTGGACAAGAAAAAAAGAAGCAGACAGCAATGCCTTATGGACCCTGAAATATTCAAATATTGAATTTAGCTGTGAATTTTCTGTCTCTAAATATATGTGCAGTTTATCCTTTACTATGTCTTAATCACTAGTTTTCTCTAAAAAAGAGATGATTATTCAACTCTCACCTGTTTCTATTCAGATTTGTTCGCCTACCAGATGAAGCGCTTTGCCTAATTGCTTCCACGGCATTCTGCGCTGAGTATCTATTGTTTTACTTTCATTCAACTACTCATAAAGGCCTTGAAGGTTGCTACCATATTCTCCTTGTCCTCTTGATAGGCCTCTGCATTTTGTCAACGGTTGCTGGAGCTATTTTGCCTACCAGCTTTCCAGCCGACGTGTGCAGCGGCATTGCCATCACCCTTCAGGGCCTTTGGTTTTATCAGACAGCTTTCACTCTGTATGGTCCAATGATGCCTGATGGTTGTGAGCTCAAGGACGATATGATGGTCATGTGTCATTCAAAAGATAGTGAGGTTAGAGGTGAATTCCTTGCAAATTTCCAGCTCTTTTCGATGGTCCTCGGAGTTCTTGGCGGAGTTGTAGGAGTTTACTGCTTTGTAGCAGCAAAGTACGGGCGTTCTGACCTCGGGAGTTCAAATGCCATCCATGCTCAAGACTAGATTATTTCCAGGTATGTCTGCATCAGAACTTTCATCTTTTGGTAGGATTCTCTAGGTGACCTCTAGTTTTGTTTTTTGCATAAAAACTTCTTTGGCTTCAGTTAGAAACTCATGCCATGTTACTAAAGTTGTTCATCTAGTTTTCGAGTAATTTTGACTTGCCACAAACATTACTCTAAAAAATTTCAAACTTATCGTGTTTGAGAGTAATATAAAAATGGTTTAAAAGACGTAAACAACACCTAAACGTGATTTACGAGAAAATCCCTTAGTGATTTTTTATTGAACACTTTTACTCGTGTTCTTATCATTGAAACACTTTTATTAGAAGTATTTATTCTAGAAGCATTTCCAAATACACTTGAAATACAATCTAGTAAAGCTCGTGATTGTCATATACACACGTATATTAGAGAAAAACGATACTTAACTATTTTATGTTATTAGTTTTGTCTCCGAGTTTAAGATTAAATTTTTATGAAATTAAAAGTTTAAGGACTTATTCGTGAAATCCAGGGAAAAAGTAACTTCCACAAACCAGGAAGAAAAGAAGGAAAAGGGATGGAGAATTGCAGTTGTGCCCTTTTACAGTTCACTTTGCAATACTTTTGAGGCAAGTAGTTCTCTATAATCCTTCTCCAACGACTTTCCACGATCTTGTTGCTTAAGTTCTTTCTGTGTAATCATGTGCCATTTTATTCTTTTGGGGGACTTTGATTGAAAATTATAGCTTCTTTTGGGCACCTCCCTTCACTATTTACCCTAACCAACAACATTTAAGAATAATGGGTCGGGGCACCATCTTGAGCGTAGCTCCTCAGCTAGTTAAAGCATATATTTGTTCTAAAGGGTCAACTATCGAGATCCACCAGATACTATATTAGAGTCAACTGTTGAGATCTACTGATCAGATGCTATATCAGGGTTAACTATCGATATCTACTAACTAGATAATACTATATTAGGGTCAATTTTCGTGATCTATTAACCAGATACTATGTTAGTATTAAGATGCTTTATGAATGATATACTTTTCATCTCGATTTTGTTTTTGAATTTGATTTGAATATGGAATTGTAACTAAAATGACCTTCGTG ATGGGATCTTTCAAGGGCCATGTTCTTCCAGGGACGCTGTTTCTTCTGGTTGGTGTTTGGCACGTGTGGAGCGCTCTGCTTCGGTACGTGTCAAATCCCAACTTGTTTCGCGTCCGTGCGTGGAACCCTGTGCCTGGCTTCAATGGAAAGCTCAAATACTTAGAGCTTTATGTTGTTGTCATTGGCGGTTTCATTGATTTGTGCATTGAGCTTTTGTATTCAACTCATCTCAAGTTCTTCGTTAATGGAGTTTTGAACCCTTCGCACATGAACAACTTTGAACATTCGGGGATGCTTCTCATGTTCTTCATTTTTGGACTCGTCGCGCTGCTCTCTGAAAAGTCGAGATTTGTTCGCCTACCAGATGAAGCGCTTTGCCTAATTGCTTCCACGGCATTCTGCGCTGAGTATCTATTGTTTTACTTTCATTCAACTACTCATAAAGGCCTTGAAGGTTGCTACCATATTCTCCTTGTCCTCTTGATAGGCCTCTGCATTTTGTCAACGGTTGCTGGAGCTATTTTGCCTACCAGCTTTCCAGCCGACGTGTGCAGCGGCATTGCCATCACCCTTCAGGGCCTTTGGTTTTATCAGACAGCTTTCACTCTGTATGGTCCAATGATGCCTGATGGTTGTGAGCTCAAGGACGATATGATGGTCATGTGTCATTCAAAAGATAGTGAGGTTAGAGGTGAATTCCTTGCAAATTTCCAGCTCTTTTCGATGGTCCTCGGAGTTCTTGGCGGAGTTGTAGGAGTTTACTGCTTTGTAGCAGCAAAGTACGGGCGTTCTGACCTCGGGAGTTCAAATGCCATCCATGCTCAAGACTAGATTATTTCCAGGGAAAAAGTAACTTCCACAAACCAGGAAGAAAAGAAGGAAAAGGGATGGAGAATTGCAGTTGTGCCCTTTTACAGTTCACTTTGCAATACTTTTGAGGCAAGTAGTTCTCTATAATCCTTCTCCAACGACTTTCCACGATCTTGTTGCTTAAGTTCTTTCTGTGTAATCATGTGCCATTTTATTCTTTTGGGGGACTTTGATTGAAAATTATAGCTTCTTTTGGGCACCTCCCTTCACTATTTACCCTAACCAACAACATTTAAGAATAATGGGTCGGGGCACCATCTTGAGCGTAGCTCCTCAGCTAGTTAAAGCATATATTTGTTCTAAAGGGTCAACTATCGAGATCCACCAGATACTATATTAGAGTCAACTGTTGAGATCTACTGATCAGATGCTATATCAGGGTTAACTATCGATATCTACTAACTAGATAATACTATATTAGGGTCAATTTTCGTGATCTATTAACCAGATACTATGTTAGTATTAAGATGCTTTATGAATGATATACTTTTCATCTCGATTTTGTTTTTGAATTTGATTTGAATATGGAATTGTAACTAAAATGACCTTCGTG ATGGGATCTTTCAAGGGCCATGTTCTTCCAGGGACGCTGTTTCTTCTGGTTGGTGTTTGGCACGTGTGGAGCGCTCTGCTTCGGTACGTGTCAAATCCCAACTTGTTTCGCGTCCGTGCGTGGAACCCTGTGCCTGGCTTCAATGGAAAGCTCAAATACTTAGAGCTTTATGTTGTTGTCATTGGCGGTTTCATTGATTTGTGCATTGAGCTTTTGTATTCAACTCATCTCAAGTTCTTCGTTAATGGAGTTTTGAACCCTTCGCACATGAACAACTTTGAACATTCGGGGATGCTTCTCATGTTCTTCATTTTTGGACTCGTCGCGCTGCTCTCTGAAAAGTCGAGATTTGTTCGCCTACCAGATGAAGCGCTTTGCCTAATTGCTTCCACGGCATTCTGCGCTGAGTATCTATTGTTTTACTTTCATTCAACTACTCATAAAGGCCTTGAAGGTTGCTACCATATTCTCCTTGTCCTCTTGATAGGCCTCTGCATTTTGTCAACGGTTGCTGGAGCTATTTTGCCTACCAGCTTTCCAGCCGACGTGTGCAGCGGCATTGCCATCACCCTTCAGGGCCTTTGGTTTTATCAGACAGCTTTCACTCTGTATGGTCCAATGATGCCTGATGGTTGTGAGCTCAAGGACGATATGATGGTCATGTGTCATTCAAAAGATAGTGAGGTTAGAGGTGAATTCCTTGCAAATTTCCAGCTCTTTTCGATGGTCCTCGGAGTTCTTGGCGGAGTTGTAGGAGTTTACTGCTTTGTAGCAGCAAAGTACGGGCGTTCTGACCTCGGGAGTTCAAATGCCATCCATGCTCAAGACTAG MGSFKGHVLPGTLFLLVGVWHVWSALLRYVSNPNLFRVRAWNPVPGFNGKLKYLELYVVVIGGFIDLCIELLYSTHLKFFVNGVLNPSHMNNFEHSGMLLMFFIFGLVALLSEKSRFVRLPDEALCLIASTAFCAEYLLFYFHSTTHKGLEGCYHILLVLLIGLCILSTVAGAILPTSFPADVCSGIAITLQGLWFYQTAFTLYGPMMPDGCELKDDMMVMCHSKDSEVRGEFLANFQLFSMVLGVLGGVVGVYCFVAAKYGRSDLGSSNAIHAQD
BLAST of CmaCh16G012090 vs. Swiss-Prot
Match: TM45B_DANRE (Transmembrane protein 45B OS=Danio rerio GN=tmem45b PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.6e-11 Identity = 59/208 (28.37%), Postives = 90/208 (43.27%), Query Frame = 1
BLAST of CmaCh16G012090 vs. Swiss-Prot
Match: TM45B_BOVIN (Transmembrane protein 45B OS=Bos taurus GN=TMEM45B PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.6e-11 Identity = 58/211 (27.49%), Postives = 97/211 (45.97%), Query Frame = 1
BLAST of CmaCh16G012090 vs. Swiss-Prot
Match: TM45A_HUMAN (Transmembrane protein 45A OS=Homo sapiens GN=TMEM45A PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10 Identity = 58/219 (26.48%), Postives = 92/219 (42.01%), Query Frame = 1
BLAST of CmaCh16G012090 vs. Swiss-Prot
Match: TM45B_XENLA (Transmembrane protein 45B OS=Xenopus laevis GN=tmem45b PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.7e-10 Identity = 60/208 (28.85%), Postives = 95/208 (45.67%), Query Frame = 1
BLAST of CmaCh16G012090 vs. Swiss-Prot
Match: TM45B_HUMAN (Transmembrane protein 45B OS=Homo sapiens GN=TMEM45B PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.2e-10 Identity = 63/227 (27.75%), Postives = 102/227 (44.93%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TrEMBL
Match: A0A0A0L1Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G006600 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 1.8e-144 Identity = 252/272 (92.65%), Postives = 263/272 (96.69%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TrEMBL
Match: M5WV49_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009929mg PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 3.8e-123 Identity = 215/272 (79.04%), Postives = 242/272 (88.97%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TrEMBL
Match: A0A061G629_THECC (C globular stage isoform 1 OS=Theobroma cacao GN=TCM_016657 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 7.2e-122 Identity = 212/272 (77.94%), Postives = 237/272 (87.13%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TrEMBL
Match: B9S1J1_RICCO (Transmembrane protein 45a, putative OS=Ricinus communis GN=RCOM_0865410 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 1.6e-121 Identity = 213/272 (78.31%), Postives = 243/272 (89.34%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TrEMBL
Match: A0A067KGS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10819 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.4e-120 Identity = 210/268 (78.36%), Postives = 239/268 (89.18%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TAIR10
Match: AT1G32120.1 (AT1G32120.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 421.0 bits (1081), Expect = 5.6e-118 Identity = 200/264 (75.76%), Postives = 231/264 (87.50%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TAIR10
Match: AT1G55240.1 (AT1G55240.1 Family of unknown function (DUF716) ) HSP 1 Score: 164.5 bits (415), Expect = 9.5e-41 Identity = 93/287 (32.40%), Postives = 162/287 (56.45%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TAIR10
Match: AT1G55230.1 (AT1G55230.1 Family of unknown function (DUF716) ) HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37 Identity = 86/271 (31.73%), Postives = 145/271 (53.51%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TAIR10
Match: AT1G49470.1 (AT1G49470.1 Family of unknown function (DUF716) ) HSP 1 Score: 130.2 bits (326), Expect = 2.0e-30 Identity = 88/276 (31.88%), Postives = 132/276 (47.83%), Query Frame = 1
BLAST of CmaCh16G012090 vs. TAIR10
Match: AT5G19870.1 (AT5G19870.1 Family of unknown function (DUF716) ) HSP 1 Score: 128.6 bits (322), Expect = 5.8e-30 Identity = 79/269 (29.37%), Postives = 139/269 (51.67%), Query Frame = 1
BLAST of CmaCh16G012090 vs. NCBI nr
Match: gi|659095474|ref|XP_008448600.1| (PREDICTED: transmembrane protein 45B [Cucumis melo]) HSP 1 Score: 527.3 bits (1357), Expect = 1.6e-146 Identity = 255/272 (93.75%), Postives = 265/272 (97.43%), Query Frame = 1
BLAST of CmaCh16G012090 vs. NCBI nr
Match: gi|449456761|ref|XP_004146117.1| (PREDICTED: transmembrane protein 45B [Cucumis sativus]) HSP 1 Score: 520.0 bits (1338), Expect = 2.5e-144 Identity = 252/272 (92.65%), Postives = 263/272 (96.69%), Query Frame = 1
BLAST of CmaCh16G012090 vs. NCBI nr
Match: gi|645265345|ref|XP_008238108.1| (PREDICTED: transmembrane protein 45A [Prunus mume]) HSP 1 Score: 454.5 bits (1168), Expect = 1.3e-124 Identity = 218/272 (80.15%), Postives = 245/272 (90.07%), Query Frame = 1
BLAST of CmaCh16G012090 vs. NCBI nr
Match: gi|595848144|ref|XP_007209466.1| (hypothetical protein PRUPE_ppa009929mg [Prunus persica]) HSP 1 Score: 449.1 bits (1154), Expect = 5.5e-123 Identity = 215/272 (79.04%), Postives = 242/272 (88.97%), Query Frame = 1
BLAST of CmaCh16G012090 vs. NCBI nr
Match: gi|1009158490|ref|XP_015897318.1| (PREDICTED: transmembrane protein 45A-like [Ziziphus jujuba]) HSP 1 Score: 446.0 bits (1146), Expect = 4.6e-122 Identity = 209/268 (77.99%), Postives = 238/268 (88.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |