CmaCh06G006080 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCTTTTAAGGGTCATGTTCTTCCGGGGACGCTGTTTCTTTTCGTTGGTGTTTGGCACGTGTGGAGTGCTCTGCTTCGGTACGTGTCAAATCCCAACTTATTTCGCGTTCATGTGTGGAATCCAGTGCCTGGCTTTGATGGAAAACTCAAATACTTGGAACTTTATGTTGTTGTCATTGGGGGTTTCATTGATTTGTGCATTGAGCTTTTGTATGCAACTCACCTCAAGTTCTTTGTCAATGGGGTTTTGAACCCTTCACATCTGAACAATTTTGAACACTCGGGGATGCTTCTCATGTTCTTCATTTTTGGAGTCATCTCTCTGCTTTCTGAAAAGTCGAGGTAATTCACTCTTGTTTCTTGATTGATCCTTTTCAGCACGGTAATAATTTAAAAGTTTAGACAATTATCGGATTGTATAACTTCTTTATTAAGATCAGTTGGGTTTAGATAATTTAGTTACTTTAGTTAAGTTAGTTTGGTTGGTTCTTTCCCAGTACTGAAGTATTTTATATTTTGCCTTCCATACAATAGTAAGCCACTGGTTGAATTACTATCTTTCAAATCCACTGAGTGGTGCTAATAGTTAAATAAGTGCAAAAGATAAAACATAATCTAACTTCAGTTAAGTTTTTGAGTGGAGTGGTAGTTCAATAGAAATATAACGGGATATAAGCTATAACCAGATAAGATATCAAACTGATGGTTGAAAATATCAGAATTTTCTTTTCGGAAGGAGCTCAAATCTTGCCTTTGCATAGTTTGTTTACGTTTGAACTTCAGTAAAATGAAGAAGTCATCATGGATACAAGGCGAAGATACCGAGATTTAGGTCCTCGAAGTATTGGTTCCTACTTGTGGCTTTCTTTGCAGTTTTCATATCATCATCGTAGCATCTTAGAACATGTGTATGAGAAGCAATTGATATGAGGTTATAACTTGATCATATAAGATGGAAGTTCTAGGGTTAGAGCACTAGCGGTTTCTTGAACATATGTCATATTTCGGACGGACATTAATGTTCTTGCTCCCCAATTTCTAGTTAGTTCAGAATTTGAAGTAAACTGTGGACAAATGAGTGTGATTATATAAATGAGTGAGATCTCACAACGGTTGGGGAGGAGAACGAATCATTCTTTATAAAGGTGTGGAAACCTTTTTCTAGCTGACGCGTTTTAAAAACTTTGAGTGGAAGCCTAAAAGGGAAAGTCCAAAGAGGACAATTGGGCTGTTACAAATGGTATCAGAGCCAAACACCGGGCGATGTGCCAGCGAAGAGGCTGAGTTCCGAAGGGGGTGGACATAAGGTGGTGTGTTAGCAAGGATGCTGGGCTCCAAAGGAGGGTGGATTGGAAGGTCTCACATCGATTAGAGAAAGGAACAAGTGTTAGCGAGGAAAAGAACGAAGCATTATTTATAAGAGTATGAAAACCTCTCTCTAGCTGCGCATTTTAAAAACTTTGAAAGGAAAGCCTAAAGAGGACAATATCTGCTAGTGATGGGCTTGGGCGGTTACACTCACGGTCATAATCAAATAAGGTTAGATAATTAAAATGGAAGCTTAAAGCAATGCCTTGTGGACCCCCAAATCTTTTAATCCAGAATTCAAATCTTGAATTGAGCTGTTAATTTAACTATCTTTTATCTGTTTTTAAATACTCGTGCAGTTTATCCTTTAGTCTGTCTTAATCACTAGTTTTTGCTGGAAGAGGTGATTATTCGACTCTCACATCTTTCTCTTCAGATTTGTTCGCCTACCAGACGAAGCGCTTTGTCTGATTGCTGCTGCGGCATTCTGCGCCGAGTATCTGTTGTTTTACTTTCATTCAACTTCTCATAAAGGCCTTGAAGGTTACTACCATATTCTCCTTGTCATCTTGATAGGGCTCTGCATATTGTCAACGGTTGCTGGAGCTATTTTACCTACCAGCTTCCCGGTTGACGTGTGCAGCGGCATCGCCATCACCCTTCAAGGCCTTTGGTTTTATCAGACAGCCTTCACTCTGTATGGTCCAATGATGCCTGATGGTTGCGAGCTGAAGGACGACATGATGGTCATGTGTCATTCGAAAGATAGCGAGGTTCGAGGTGAATTCCTTGCAAATTTCCAGCTCTTTTCTATGGTCCTTGGAGTTCTTGGCGGAGTCGTTGGAGTTTACTACTTTGCAGCGGCGAAGTACAGATGTTCCGAGCTCAGGAGTTCGAATGCCATCAATGCTCAAGACTAGATTATTCCGGGTATGTCAGCATCAAAATTTTCATTTTTTCTTTTTGGTAGTGTTCTCTAGGCAATATCTTGTTTTGTTTATTACATAGAACTCCTCGTAGCTTCCGTTAGAAATTCATGCCATACCACAAGTTTCTTATAAAATACAACTTGAAGAACGATTACCCACACATAGACTCATTATGCTGAAAGATTATGTTTTGGAGTGCTTTTGATTGTCAAAAACACTTCTCTCTCGAAATCATTATGTTTGGGAGTACATTAAAGTGCTTTTCGAGAGTTAAAACTGCTTTTGGCACAAATTCTCGACTTCAGAACACTTCGAATAGGCTTTTAGGAACACAAAACCAATGATTTGTTATTAAACACTCTTTACTTAACTGCTTAGGATTAAAATACTTTTACTAGAAGCACTTTTTCCTAGAGCACTCTTATGAGACTAACAAATTGAAGTTACTAATTGTCACTCATCCAAGTTTAGGGTTAAACTTTTAATGAAAATGAAAGTTTAAGATTAAGATTAATTCATTAGTAAATAAGAGAAGATTTTGAGGCCAACAGTTCTGTTCTGTATGCTCATTCTCCAATGATTTTCCATGATCTTGTTGCATAAGTTTTTTCTGTGTAATCATGTGACTCTGCCAAAGATGGTCTTATTTTATTCTTTTGGGTAAACTATGATTGAAAATTGTTGCCTTTTTGGGGAAACTTTCCAATTGCTATGATTCCGTTCTAACATAGTTCACCTTAGCGACAATATTTTGTCAACTTAAATATATTTTAACCGGTTTAGACATTTCTATGTTCTAATCTCCATCTCTCGTTCTTGATTTCTTAATAAACAAAATGGTCGGCTCATGACTTTAAGTTTCATGTTAATGATGAAAGTTTCACATTTGGCTAATTTAGG ATGGGATCTTTTAAGGGTCATGTTCTTCCGGGGACGCTGTTTCTTTTCGTTGGTGTTTGGCACGTGTGGAGTGCTCTGCTTCGGTACGTGTCAAATCCCAACTTATTTCGCGTTCATGTGTGGAATCCAGTGCCTGGCTTTGATGGAAAACTCAAATACTTGGAACTTTATGTTGTTGTCATTGGGGGTTTCATTGATTTGTGCATTGAGCTTTTGTATGCAACTCACCTCAAGTTCTTTGTCAATGGGGTTTTGAACCCTTCACATCTGAACAATTTTGAACACTCGGGGATGCTTCTCATGTTCTTCATTTTTGGAGTCATCTCTCTGCTTTCTGAAAAGTCGAGATTTGTTCGCCTACCAGACGAAGCGCTTTGTCTGATTGCTGCTGCGGCATTCTGCGCCGAGTATCTGTTGTTTTACTTTCATTCAACTTCTCATAAAGGCCTTGAAGGTTACTACCATATTCTCCTTGTCATCTTGATAGGGCTCTGCATATTGTCAACGGTTGCTGGAGCTATTTTACCTACCAGCTTCCCGGTTGACGTGTGCAGCGGCATCGCCATCACCCTTCAAGGCCTTTGGTTTTATCAGACAGCCTTCACTCTGTATGGTCCAATGATGCCTGATGGTTGCGAGCTGAAGGACGACATGATGGTCATGTGTCATTCGAAAGATAGCGAGGTTCGAGGTGAATTCCTTGCAAATTTCCAGCTCTTTTCTATGGTCCTTGGAGTTCTTGGCGGAGTCGTTGGAGTTTACTACTTTGCAGCGGCGAAGTACAGATGTTCCGAGCTCAGGAGTTCGAATGCCATCAATGCTCAAGACTAGATTATTCCGGGTATGTCAGCATCAAAATTTTCATTTTTTCTTTTTGGTAGTGTTCTCTAGGCAATATCTTGTTTTGTTTATTACATAGAACTCCTCGTAGCTTCCGTTAGAAATTCATGCCATACCACAAGTTTCTTATAAAATACAACTTGAAGAACGATTACCCACACATAGACTCATTATGCTGAAAGATTATGTTTTGGAGTGCTTTTGATTGTCAAAAACACTTCTCTCTCGAAATCATTATGTTTGGGAGTACATTAAAGTGCTTTTCGAGAGTTAAAACTGCTTTTGGCACAAATTCTCGACTTCAGAACACTTCGAATAGGCTTTTAGGAACACAAAACCAATGATTTGTTATTAAACACTCTTTACTTAACTGCTTAGGATTAAAATACTTTTACTAGAAGCACTTTTTCCTAGAGCACTCTTATGAGACTAACAAATTGAAGTTACTAATTGTCACTCATCCAAGTTTAGGGTTAAACTTTTAATGAAAATGAAAGTTTAAGATTAAGATTAATTCATTAGTAAATAAGAGAAGATTTTGAGGCCAACAGTTCTGTTCTGTATGCTCATTCTCCAATGATTTTCCATGATCTTGTTGCATAAGTTTTTTCTGTGTAATCATGTGACTCTGCCAAAGATGGTCTTATTTTATTCTTTTGGGTAAACTATGATTGAAAATTGTTGCCTTTTTGGGGAAACTTTCCAATTGCTATGATTCCGTTCTAACATAGTTCACCTTAGCGACAATATTTTGTCAACTTAAATATATTTTAACCGGTTTAGACATTTCTATGTTCTAATCTCCATCTCTCGTTCTTGATTTCTTAATAAACAAAATGGTCGGCTCATGACTTTAAGTTTCATGTTAATGATGAAAGTTTCACATTTGGCTAATTTAGG ATGGGATCTTTTAAGGGTCATGTTCTTCCGGGGACGCTGTTTCTTTTCGTTGGTGTTTGGCACGTGTGGAGTGCTCTGCTTCGGTACGTGTCAAATCCCAACTTATTTCGCGTTCATGTGTGGAATCCAGTGCCTGGCTTTGATGGAAAACTCAAATACTTGGAACTTTATGTTGTTGTCATTGGGGGTTTCATTGATTTGTGCATTGAGCTTTTGTATGCAACTCACCTCAAGTTCTTTGTCAATGGGGTTTTGAACCCTTCACATCTGAACAATTTTGAACACTCGGGGATGCTTCTCATGTTCTTCATTTTTGGAGTCATCTCTCTGCTTTCTGAAAAGTCGAGATTTGTTCGCCTACCAGACGAAGCGCTTTGTCTGATTGCTGCTGCGGCATTCTGCGCCGAGTATCTGTTGTTTTACTTTCATTCAACTTCTCATAAAGGCCTTGAAGGTTACTACCATATTCTCCTTGTCATCTTGATAGGGCTCTGCATATTGTCAACGGTTGCTGGAGCTATTTTACCTACCAGCTTCCCGGTTGACGTGTGCAGCGGCATCGCCATCACCCTTCAAGGCCTTTGGTTTTATCAGACAGCCTTCACTCTGTATGGTCCAATGATGCCTGATGGTTGCGAGCTGAAGGACGACATGATGGTCATGTGTCATTCGAAAGATAGCGAGGTTCGAGGTGAATTCCTTGCAAATTTCCAGCTCTTTTCTATGGTCCTTGGAGTTCTTGGCGGAGTCGTTGGAGTTTACTACTTTGCAGCGGCGAAGTACAGATGTTCCGAGCTCAGGAGTTCGAATGCCATCAATGCTCAAGACTAG MGSFKGHVLPGTLFLFVGVWHVWSALLRYVSNPNLFRVHVWNPVPGFDGKLKYLELYVVVIGGFIDLCIELLYATHLKFFVNGVLNPSHLNNFEHSGMLLMFFIFGVISLLSEKSRFVRLPDEALCLIAAAAFCAEYLLFYFHSTSHKGLEGYYHILLVILIGLCILSTVAGAILPTSFPVDVCSGIAITLQGLWFYQTAFTLYGPMMPDGCELKDDMMVMCHSKDSEVRGEFLANFQLFSMVLGVLGGVVGVYYFAAAKYRCSELRSSNAINAQD
BLAST of CmaCh06G006080 vs. Swiss-Prot
Match: TM45B_BOVIN (Transmembrane protein 45B OS=Bos taurus GN=TMEM45B PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.1e-12 Identity = 60/211 (28.44%), Postives = 99/211 (46.92%), Query Frame = 1
BLAST of CmaCh06G006080 vs. Swiss-Prot
Match: TM45B_XENLA (Transmembrane protein 45B OS=Xenopus laevis GN=tmem45b PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.3e-11 Identity = 62/208 (29.81%), Postives = 97/208 (46.63%), Query Frame = 1
BLAST of CmaCh06G006080 vs. Swiss-Prot
Match: TM45A_HUMAN (Transmembrane protein 45A OS=Homo sapiens GN=TMEM45A PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.3e-11 Identity = 56/218 (25.69%), Postives = 96/218 (44.04%), Query Frame = 1
BLAST of CmaCh06G006080 vs. Swiss-Prot
Match: TM45B_MOUSE (Transmembrane protein 45B OS=Mus musculus GN=Tmem45b PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.7e-10 Identity = 59/218 (27.06%), Postives = 97/218 (44.50%), Query Frame = 1
BLAST of CmaCh06G006080 vs. Swiss-Prot
Match: TM45B_XENTR (Transmembrane protein 45B OS=Xenopus tropicalis GN=tmem45b PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 5.3e-09 Identity = 59/213 (27.70%), Postives = 93/213 (43.66%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TrEMBL
Match: A0A0A0L1Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G006600 PE=4 SV=1) HSP 1 Score: 513.5 bits (1321), Expect = 1.6e-142 Identity = 249/272 (91.54%), Postives = 263/272 (96.69%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TrEMBL
Match: M5WV49_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009929mg PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 8.5e-123 Identity = 213/272 (78.31%), Postives = 241/272 (88.60%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TrEMBL
Match: A0A061G629_THECC (C globular stage isoform 1 OS=Theobroma cacao GN=TCM_016657 PE=4 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 4.2e-122 Identity = 214/272 (78.68%), Postives = 240/272 (88.24%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TrEMBL
Match: V4T8F5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002116mg PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 1.4e-120 Identity = 209/272 (76.84%), Postives = 237/272 (87.13%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TrEMBL
Match: B9S1J1_RICCO (Transmembrane protein 45a, putative OS=Ricinus communis GN=RCOM_0865410 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 2.3e-120 Identity = 209/272 (76.84%), Postives = 243/272 (89.34%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TAIR10
Match: AT1G32120.1 (AT1G32120.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 417.9 bits (1073), Expect = 4.8e-117 Identity = 200/264 (75.76%), Postives = 231/264 (87.50%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TAIR10
Match: AT1G55240.1 (AT1G55240.1 Family of unknown function (DUF716) ) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41 Identity = 88/245 (35.92%), Postives = 148/245 (60.41%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TAIR10
Match: AT1G55230.1 (AT1G55230.1 Family of unknown function (DUF716) ) HSP 1 Score: 149.8 bits (377), Expect = 2.4e-36 Identity = 84/268 (31.34%), Postives = 143/268 (53.36%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TAIR10
Match: AT5G19870.1 (AT5G19870.1 Family of unknown function (DUF716) ) HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30 Identity = 78/254 (30.71%), Postives = 138/254 (54.33%), Query Frame = 1
BLAST of CmaCh06G006080 vs. TAIR10
Match: AT1G49470.1 (AT1G49470.1 Family of unknown function (DUF716) ) HSP 1 Score: 126.3 bits (316), Expect = 2.9e-29 Identity = 82/262 (31.30%), Postives = 125/262 (47.71%), Query Frame = 1
BLAST of CmaCh06G006080 vs. NCBI nr
Match: gi|659095474|ref|XP_008448600.1| (PREDICTED: transmembrane protein 45B [Cucumis melo]) HSP 1 Score: 518.8 bits (1335), Expect = 5.6e-144 Identity = 251/272 (92.28%), Postives = 264/272 (97.06%), Query Frame = 1
BLAST of CmaCh06G006080 vs. NCBI nr
Match: gi|449456761|ref|XP_004146117.1| (PREDICTED: transmembrane protein 45B [Cucumis sativus]) HSP 1 Score: 513.5 bits (1321), Expect = 2.4e-142 Identity = 249/272 (91.54%), Postives = 263/272 (96.69%), Query Frame = 1
BLAST of CmaCh06G006080 vs. NCBI nr
Match: gi|645265345|ref|XP_008238108.1| (PREDICTED: transmembrane protein 45A [Prunus mume]) HSP 1 Score: 451.8 bits (1161), Expect = 8.4e-124 Identity = 215/272 (79.04%), Postives = 244/272 (89.71%), Query Frame = 1
BLAST of CmaCh06G006080 vs. NCBI nr
Match: gi|595848144|ref|XP_007209466.1| (hypothetical protein PRUPE_ppa009929mg [Prunus persica]) HSP 1 Score: 448.0 bits (1151), Expect = 1.2e-122 Identity = 213/272 (78.31%), Postives = 241/272 (88.60%), Query Frame = 1
BLAST of CmaCh06G006080 vs. NCBI nr
Match: gi|590680190|ref|XP_007040793.1| (C globular stage isoform 1 [Theobroma cacao]) HSP 1 Score: 445.7 bits (1145), Expect = 6.0e-122 Identity = 214/272 (78.68%), Postives = 240/272 (88.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |