MELO3C013802 (gene) Melon (DHL92) v3.5.1

NameMELO3C013802
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTransmembrane protein 45B
Locationchr6 : 35088511 .. 35091395 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTAAGTTTGAGAAGGTGGAACCGACCGGAATCAGATCCTCACCTTGCCGCCATCGTCAACGCCACTTTCAAGCACTCTCTTCTTCTCTCTCTCTCCCCCTTTGTGCCAAAGCCTTTTTCGGGGACCGCAAAAGGGCTGATTTCTTCTGCAACAAACAACCCCTCGCATGGTGGGATCGACTCCTTTCAATCACCTTATTATGCAATCGTCAGTGCTTTTCCCACTTATCATTACCAATTCATTATTCCATCATTTTCCGTTTCCCCTTCTTCTTTTTCCATTTCCACTTGATTTTTATCATCAGAATTACGAAATCTGTTTCCTCTTTTCTGTTTCTGTTTTTTCATGGCTGCTGTGTTATTTGAGCTGCTCGATTTTTTTTTTGTTCTACTTTGGCCGTTTTGTTTCACCTGTGGATCTGTTTTTTTATTTATTTATTTTATTTCGTTTTTATACATCATTGCGATATTGGATGTTGCTTTCAATTGTTCGATTTTGACCAAAGAAGTGGAAGACTGACGATCTTTTTTTAAGAAGAATCGATTTCTAAAGCGTTTCTTATTTTGCCTTCAAAAAATAGGTTTATTTGTCTTCTTCCTCAATTATTAGTTTCAATAATGCTCTTCTTTTTACGCACTGTGTTCTTGCTGTGTTTTGCGAGAATTATTGGTACTTTTACTTGTTTTCACGAAGCATTTCACGAATTATTCAAAAGAGTTGAGGAAGTTCCCGTGTTGATTTACTGAATGGAAGTGTTTTTTTTTTTTTGGGAGGGAAAACAGAATTTGGCTTAATGGTAGAAGAGGAGAAGTTATCACAAAAGTGAAGATCACGGAGGAATAGAGTGGTAAAAGCGATTTGAAGATATGGGATCTTTTAAGGGCCATGTTCTTCCAGGAACGCTGTTTCTTCTGGTTGGTGTTTGGCACGTATGGAGTGCTCTGCTTCGGTACGTGTTAAATCCTAGCTTGTTTCGTGTTCGTGTGTGGAATCCCATGCCTGGCTTCGACGGAAAACTCAAATACTTAGAGCTTTATGTTATTGTTATTGGCGGTTTCATTGATTTGTGTATTGAGCTTTTGTATTCAACCCATCTTAAGTTCTTCGTTAATGGAGTTTTGAACCCTTCGCATATGAACAACTTTGAACATTCGGGGATGCTTCTCATGTTCTTCATTTTTGGAGTCATCGCTTTGCTCTCTGAAAAATCCAGGTAATTCGTTATTGTTTCATGAACAAAGCATTTGAGAGTGTTAACTTTTTCATTAAAGTTTCTTATTATTTTTGTTTAGATCAGTTCGGTTTAGTTAATTTAGTACTTTGCTTAAGTTAGTTTTGTGAAGTACTTTGAAAACGTGCATAACAGATTAAACAGACTATAACTTAGTTTCTGAGTTGAGTGGTGGGTTTAATAAAAACATGATGTTGGATATATGTCATTACTTGATAAGACATATCAAATTGATGGTGGAAAGTATGAGGATTTTCTTTTAAGAAGGAATTTAAGCCGGCAAGGACGAGCAAACGTGGCGTGTGTAGATGTATCTTTGCTGAATTGGTTGACTAAAAGTTCACGAACTTTTGCTCTTGATCTTGCAGTAGTTTGTTTACATCAGGAAATTGAATAAGTGATCATAGTTTCAAGGTGAAGATTTCAAAGTTTAGGTCTGTGAAGGATCTGTTCTGATTTATACCTTTCGTGCTGTTTTCGTACAATCAAGTTCACATATTAGTAAAGTAACACATGTATGGGAAGTAATTGATATGAAGATATAGCCTACAGATCATATAAGATGGAAGTTCTGGGATGAGAGCAATAGCAATTTCTACCACATCATATTTTAAGTTGTGCCCATTCCCAAACTTCGCTGAAAAGACACCTTTTTCGTCCTGATTTCTAGTATTTTTCAGTTCGTAGGAGATCATCGTCCAGAATTTGAAGTGAAATGTGGACAAATAAATGGTTATATTGTACAGAAGGGGACATGTCTAATTTGCATAATCTTTTAATCTAGTATTCAAATATTGAATTGAGTTGTTAACTATCAGTTTCTAAATATATGTGCAGTTTATCTTTTACTATCTTTAATCTTAAATCTTAATTACTAGTTTTTTTTTTACTTGAAAAAGAGCTGATTATTCAACTCTCACCTCTTTCTGTTTAGATTTGTTCGTCTACCAGACGAAGCGCTTTGTCTGATTGCTGCCACGGCATTCTGCGCCGAATATCTGTTGTTTTACTTTCACTCAACTACTCACAAAGGCCTTGAGGGTTATTACCATATTCTCCTTGTCCTCTTGATTGGGCTCTGCATTTTGTCGACGGTTGCTGGAGCTATTTTACCTACCAGCTTTCCGGTTGACATGTGCAGCGGTATCGCCATTACGCTCCAGGGTCTTTGGTTTTATCAAACAGCCTTCACTTTGTATGGTCCAATGATGCCTGATGGTTGTGAGCTTAAGGATGATATGATGGTCATGTGTCATTCAAAAGATAGTGAGGTTAGAGGTGAACTCCTAGCAAATTTCCAGCTCTTTTCTATGGTCATTGGAGTCCTTGGTGGGGTCGTCGGAGTTTACTGGTTTGCAGCATCGAAGTACGGGCGATCCGACCTTGGAAGTTCGAATGCCATCCAAGAATAGATTGTTTCCGGGTATGTCTTGCATCAAAATTTCATCTCTTTGTAGGATTCTTTAGGCGACTTCTAGGTTTGTTTCTTTACACATAAAAAGTAAAACATCTTTAGCTTCATTTAGAAATCCATGCCACGGTTATGATTTGGAGTGCTGCTTAACATGCTATTTTTTGTTATTATTTTTTAACACTTGAATGCTTTGTGAGTAAACAAATCCAAAGTGCATTTGGCTTGAGTGCTTTGACTTG

mRNA sequence

GTTAAGTTTGAGAAGGTGGAACCGACCGGAATCAGATCCTCACCTTGCCGCCATCGTCAACGCCACTTTCAAGCACTCTCTTCTTCTCTCTCTCTCCCCCTTTGTGCCAAAGCCTTTTTCGGGGACCGCAAAAGGGCTGATTTCTTCTGCAACAAACAACCCCTCGCATGGTGGGATCGACTCCTTTCAATCACCTTATTATGCAATCAATTTGGCTTAATGGTAGAAGAGGAGAAGTTATCACAAAAGTGAAGATCACGGAGGAATAGAGTGGTAAAAGCGATTTGAAGATATGGGATCTTTTAAGGGCCATGTTCTTCCAGGAACGCTGTTTCTTCTGGTTGGTGTTTGGCACGTATGGAGTGCTCTGCTTCGGTACGTGTTAAATCCTAGCTTGTTTCGTGTTCGTGTGTGGAATCCCATGCCTGGCTTCGACGGAAAACTCAAATACTTAGAGCTTTATGTTATTGTTATTGGCGGTTTCATTGATTTGTGTATTGAGCTTTTGTATTCAACCCATCTTAAGTTCTTCGTTAATGGAGTTTTGAACCCTTCGCATATGAACAACTTTGAACATTCGGGGATGCTTCTCATGTTCTTCATTTTTGGAGTCATCGCTTTGCTCTCTGAAAAATCCAGATTTGTTCGTCTACCAGACGAAGCGCTTTGTCTGATTGCTGCCACGGCATTCTGCGCCGAATATCTGTTGTTTTACTTTCACTCAACTACTCACAAAGGCCTTGAGGGTTATTACCATATTCTCCTTGTCCTCTTGATTGGGCTCTGCATTTTGTCGACGGTTGCTGGAGCTATTTTACCTACCAGCTTTCCGGTTGACATGTGCAGCGGTATCGCCATTACGCTCCAGGGTCTTTGGTTTTATCAAACAGCCTTCACTTTGTATGGTCCAATGATGCCTGATGGTTGTGAGCTTAAGGATGATATGATGGTCATGTGTCATTCAAAAGATAGTGAGGTTAGAGGTGAACTCCTAGCAAATTTCCAGCTCTTTTCTATGGTCATTGGAGTCCTTGGTGGGGTCGTCGGAGTTTACTGGTTTGCAGCATCGAAGTACGGGCGATCCGACCTTGGAAGTTCGAATGCCATCCAAGAATAGATTGTTTCCGGGTATGTCTTGCATCAAAATTTCATCTCTTTGTAGGATTCTTTAGGCGACTTCTAGGTTTGTTTCTTTACACATAAAAAGTAAAACATCTTTAGCTTCATTTAGAAATCCATGCCACGGTTATGATTTGGAGTGCTGCTTAACATGCTATTTTTTGTTATTATTTTTTAACACTTGAATGCTTTGTGAGTAAACAAATCCAAAGTGCATTTGGCTTGAGTGCTTTGACTTG

Coding sequence (CDS)

ATGGGATCTTTTAAGGGCCATGTTCTTCCAGGAACGCTGTTTCTTCTGGTTGGTGTTTGGCACGTATGGAGTGCTCTGCTTCGGTACGTGTTAAATCCTAGCTTGTTTCGTGTTCGTGTGTGGAATCCCATGCCTGGCTTCGACGGAAAACTCAAATACTTAGAGCTTTATGTTATTGTTATTGGCGGTTTCATTGATTTGTGTATTGAGCTTTTGTATTCAACCCATCTTAAGTTCTTCGTTAATGGAGTTTTGAACCCTTCGCATATGAACAACTTTGAACATTCGGGGATGCTTCTCATGTTCTTCATTTTTGGAGTCATCGCTTTGCTCTCTGAAAAATCCAGATTTGTTCGTCTACCAGACGAAGCGCTTTGTCTGATTGCTGCCACGGCATTCTGCGCCGAATATCTGTTGTTTTACTTTCACTCAACTACTCACAAAGGCCTTGAGGGTTATTACCATATTCTCCTTGTCCTCTTGATTGGGCTCTGCATTTTGTCGACGGTTGCTGGAGCTATTTTACCTACCAGCTTTCCGGTTGACATGTGCAGCGGTATCGCCATTACGCTCCAGGGTCTTTGGTTTTATCAAACAGCCTTCACTTTGTATGGTCCAATGATGCCTGATGGTTGTGAGCTTAAGGATGATATGATGGTCATGTGTCATTCAAAAGATAGTGAGGTTAGAGGTGAACTCCTAGCAAATTTCCAGCTCTTTTCTATGGTCATTGGAGTCCTTGGTGGGGTCGTCGGAGTTTACTGGTTTGCAGCATCGAAGTACGGGCGATCCGACCTTGGAAGTTCGAATGCCATCCAAGAATAG
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006904DUF716_TMEM45
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU52277melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013802T3MELO3C013802T3mRNA
MELO3C013802T2MELO3C013802T2mRNA
MELO3C013802T1MELO3C013802T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU52277MU52277transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006904Protein of unknown function DUF716 (TMEM45)PANTHERPTHR16007EPIDIDYMAL MEMBRANE PROTEIN E9-RELATEDcoord: 1..264
score: 4.3
IPR006904Protein of unknown function DUF716 (TMEM45)PFAMPF04819DUF716coord: 124..254
score: 5.7