CmaCh08G002510 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G002510
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RAN GTPase 3
Location	Cma_Chr08 : 1416947 .. 1419931 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTACCAATGTGAATTCATGAGCATGCTATCAAAGCCAGTTGGGACCCAATTCAAGCGCCAAAAAGTTGATTATATTTACGAATTTCCCGATAATCATGGCGTATTTCAGTGCCTCCTGTCATGAGGTTGTAGTTATAGTCATTACTATCCATTTCGGACCGCACAAAAACCTCCATAGCAAGCTTCTTCATCTTCATCTGCATCAATGGCGAGTGACGAGGACCAGGGCGGTGAGGAGTACTTGTACAAGATTGTCCTTATTGGCGACTCTGCTGTGGGCAAATCGAACCTCCTCTCGCGATTTGCTCGGAATGAGTTCGATAACAACTCCAAGGCTACAATCGGCGTCGAGTTTCAGACTCAAGTGGTGGAAATCGACGGCAAAGAGGTGAAGGCTCAGATCTGGGATACTGCTGGCCAGGAGCGATTTAGGGCTGTCACTTCGGCCTACTATCGCGGCGCTTTTGGTGCGCTGATTGTCTACGATATCAGCCGTCGGACAACCTTCGACAGTGTCAAGCGGTGGCTCGACGAACTCGGCGGTACGTTCTCTTTGAATCTTTTTGGTTGCTTTACTGTTCAGTTTGTTTGCAGAAGCTTTATAGAACTGAATCCAATTTTTGCGTCTGTTTACTAGAATCTGTTGCTGGTTTTGTTTATTGATTCTTTGATTTGTGTAGAACTGTAAGTAAGATATGAATAATGGAAAAATCAGGGTTATTGTTCATTCTTCTTTTGTTGGGGGAAAGCTGGATTAGATTGGTGAAAAAGGTTGAATCATGTGTTCTTTTACTTACTAAAGTTGCTTCAGTGAGTAGTTTTTAATGAACTAAAGGATGAGCAGTGTTGAGTTTTGCCAAATTTACATCTAAGAGAATTGTATATTGTTTAGACCCGTGTACTGGTTGAAATCAGATTCAAAAAGAAAAGCTGTGGAGGGACCTTAAATGTTAGCTCATAAGTCATATTTGATAGATGAACACGACTCTCTAGATATGATATTGTCCACTTAGGTGATGTGGGACTTTCATCATCCAACATCTCCCCTCGAACAAAGTACGCCTCTCTTTAATCGAGGCTCGACTTCTTTTTCTTTTGGAGTCTTAGTCATTTTTTACTATGTCTTCGAGGAGGCTCGATTCCTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTCACCAATCTATTGGCACGAATGAGTTTAGGGCATGACTTTGATACCATGTTAGATGAACACGACTCTCCACCATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCTCCAAAAGGCCTCACACCAATGGAGAGAGTATTCTTTGATTATATACCCATGATCATTCCCTAAATTAGCGTAGGTGGGACTTTCCTCACAAATTTAGGGCAACTACTTGTCAACCCATTATATTGAAATTTGAACTTCAGTTTGTGGCATTTGAAGGTATTACGGAATAGTTGCTTAGTCGATACAGGCCTATCCTAAGAAGTGACTAGATGTTAGTTACTTATTGTTTTTTTTAGTTCAACCATCACCATACGTTTTGATCTACAATTTATGCCTTACCAAATGAACTTTGCTTTTAGGTTGGTAGGGTTAGTCACCATTGAATCAAGGACCTAATAACTTCTTTTTTCCAAATTTTGAACTGTATGCTTTTCAGGTGATTTATCCTTTCTCATTTGGATATATTTTTTAGTTTCTTTAACAGTCTAAGCCCATTGCTAGCAAATGTTGTATTCTTTGGGTTTTCACACCCTTATAAGGAATGCTTCATTTTCATATGAAAAGTTTCCACACCCTTATAAGGAATGCTTCATTTTCATAGAAGTTTGTACATTTTCTCTTAGCTCCCTTCTCAAAGTTTCAAAGGAAAAGTTTCCACGCCCTTATAAGGAATGCTTCATTTTCATAGGAGAAGTTTCCACACCTTTATAAGGAATGATGCTTCATTTTCATTGGGCATCTTCTCCGAAGTCTGGCTTTGATACCATTTGTAATGGCTAGCCCATTAGCAGATATTGTTTTCTTTGGGCTTTTCCTTCTCGGCTTCCCCTCAAAATTTTTAAATGCATATACTAGGGGGAGAGGTTTCCATGCCCTTATAAGGAATGATTTGTTCTTCTCTCAAACCAAGATGGAATCTCACATGTCCTAAACTAAACTAAAGCTTAATGTTAATAGTGATATTGCTTATACTTGAACATAGTTGTTTCTCTTGCTAGGGTATGGGTTACATTGACATCTTTGTATCTCTAGATAGGTCTATAAAGCAAGCGAGAAACCATCCCTCTGTCAACACGATCTCATACCTTCATTGTGGTTTGCAATTTGTAAGATTATAATAAACTAACGTATCCCTCCCGAAACGATTACAGTTCATTGTGATACCGCGACTGTGAAGATGCTGGTAGGAAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGCAAGAATCTGGCAGAAGAGGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTCATAACAGCCTTTGAGCTTGTCATTAAGGAGATTTACAACAATGTCAGCAGGAAAGTCCTTAACTCTGATTCTTATAAGGCTGAGCTTTCTGTAAATCGAGTAAGCTTGGCTGATGGGGCTGCCTCCTCCAAGAAAGGCTTCTCTTGTTGTTCTCAATGAGTTTCAATTTTTTTTTTTTTCGGGTCAAATTTTAAAAAATATTTAATAGGGCCAAGAGTACTGTTGGACGTATTAAAAGTGAGATTTATTAGATATCAAATGGAAAGCGTTTGAAAATTTAGAAATATATTACACATCTTAAAAGATGTTCACGAGCTAAACTTGAAATTTAACGTTTTTTTGAGTGCCATTGTTTTGTGGTGCTTATGAATACTCAAATGTGGGTATGTTTGGCTACAAAAATTTTAAAAGGATTACATGTTAGAAATCA

mRNA sequence

CGATTACCAATGTGAATTCATGAGCATGCTATCAAAGCCAGTTGGGACCCAATTCAAGCGCCAAAAAGTTGATTATATTTACGAATTTCCCGATAATCATGGCGTATTTCAGTGCCTCCTGTCATGAGGTTGTAGTTATAGTCATTACTATCCATTTCGGACCGCACAAAAACCTCCATAGCAAGCTTCTTCATCTTCATCTGCATCAATGGCGAGTGACGAGGACCAGGGCGGTGAGGAGTACTTGTACAAGATTGTCCTTATTGGCGACTCTGCTGTGGGCAAATCGAACCTCCTCTCGCGATTTGCTCGGAATGAGTTCGATAACAACTCCAAGGCTACAATCGGCGTCGAGTTTCAGACTCAAGTGGTGGAAATCGACGGCAAAGAGGTGAAGGCTCAGATCTGGGATACTGCTGGCCAGGAGCGATTTAGGGCTGTCACTTCGGCCTACTATCGCGGCGCTTTTGGTGCGCTGATTGTCTACGATATCAGCCGTCGGACAACCTTCGACAGTGTCAAGCGGTGGCTCGACGAACTCGGCGTTCATTGTGATACCGCGACTGTGAAGATGCTGGTAGGAAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGCAAGAATCTGGCAGAAGAGGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTCATAACAGCCTTTGAGCTTGTCATTAAGGAGATTTACAACAATGTCAGCAGGAAAGTCCTTAACTCTGATTCTTATAAGGCTGAGCTTTCTGTAAATCGAGTAAGCTTGGCTGATGGGGCTGCCTCCTCCAAGAAAGGCTTCTCTTGTTGTTCTCAATGAGTTTCAATTTTTTTTTTTTTCGGGTCAAATTTTAAAAAATATTTAATAGGGCCAAGAGTACTGTTGGACGTATTAAAAGTGAGATTTATTAGATATCAAATGGAAAGCGTTTGAAAATTTAGAAATATATTACACATCTTAAAAGATGTTCACGAGCTAAACTTGAAATTTAACGTTTTTTTGAGTGCCATTGTTTTGTGGTGCTTATGAATACTCAAATGTGGGTATGTTTGGCTACAAAAATTTTAAAAGGATTACATGTTAGAAATCA

Coding sequence (CDS)

ATGGCGAGTGACGAGGACCAGGGCGGTGAGGAGTACTTGTACAAGATTGTCCTTATTGGCGACTCTGCTGTGGGCAAATCGAACCTCCTCTCGCGATTTGCTCGGAATGAGTTCGATAACAACTCCAAGGCTACAATCGGCGTCGAGTTTCAGACTCAAGTGGTGGAAATCGACGGCAAAGAGGTGAAGGCTCAGATCTGGGATACTGCTGGCCAGGAGCGATTTAGGGCTGTCACTTCGGCCTACTATCGCGGCGCTTTTGGTGCGCTGATTGTCTACGATATCAGCCGTCGGACAACCTTCGACAGTGTCAAGCGGTGGCTCGACGAACTCGGCGTTCATTGTGATACCGCGACTGTGAAGATGCTGGTAGGAAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGCAAGAATCTGGCAGAAGAGGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTCATAACAGCCTTTGAGCTTGTCATTAAGGAGATTTACAACAATGTCAGCAGGAAAGTCCTTAACTCTGATTCTTATAAGGCTGAGCTTTCTGTAAATCGAGTAAGCTTGGCTGATGGGGCTGCCTCCTCCAAGAAAGGCTTCTCTTGTTGTTCTCAATGA

Protein sequence

MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ

Homology

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BLAST of CmaCh08G002510 vs. Swiss-Prot
Match: RAA5B_ARATH (Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.9e-91
Identity = 174/214 (81.31%), Postives = 192/214 (89.72%), Query Frame = 1


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKA 64
           ED  GEEYL+KIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGAFGALIVYDI+R  TF+SVKRWL EL  HCDTA  +MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLN 184
           GNKCDLE+IR VSVEEGK LAEEEGLFFMETSALD+TNV  AFE+VI+EI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDSYKAELSVNRVSLA---DGAASSKKGFSCCSQ 216
           SD+YKAELSVNRVSL    DG+ SS +  SCCS+
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

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BLAST of CmaCh08G002510 vs. Swiss-Prot
Match: RAA5E_ARATH (Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.0e-89
Identity = 169/215 (78.60%), Postives = 188/215 (87.44%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           S +D+G EEYL+KIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKEV
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+RRTTF+SV RWLDEL +H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           LVGNKCDLENIR VSVEEGK LAEEEGLFF+ETSALDSTNV TAFE+VI +IYNNVSRK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDSYKAELSVNRVSLA---DGAASSKKGFSCCS 215
           LNSD+YK EL+VNRVSL    + A+    GFSCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 216

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BLAST of CmaCh08G002510 vs. Swiss-Prot
Match: RAA5C_ARATH (Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.4e-88
Identity = 164/213 (77.00%), Postives = 186/213 (87.32%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           SD+D+ GEEYL+KIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R +TF++V RWLDEL  H DT   KM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           L+GNKCDLE+IR VSVEEGK+LAE EGLFFMETSALDSTNV TAFE+VI+EIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           LNSDSYK EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

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BLAST of CmaCh08G002510 vs. Swiss-Prot
Match: RAA5D_ARATH (Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 5.4e-86
Identity = 167/216 (77.31%), Postives = 190/216 (87.96%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           S +D+GGEEYL+KIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR+TF+SV RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           LVGNKCDLE+IR VSVEEGK LAE EGLFFMETSALDSTNV TAFE+VI++IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSYKAELSV-NRVSLA--DGAASSKK-GFSCCS 215
           LNSD+YK ELS+ NRVSL   D  +S++  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

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BLAST of CmaCh08G002510 vs. Swiss-Prot
Match: RAA5A_ARATH (Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.1e-70
Identity = 144/216 (66.67%), Postives = 169/216 (78.24%), Query Frame = 1


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKA 64
           ED   E+YL+KIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKE+KA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR TF S+ RWL+EL  H D   V +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLN 184
           GNK DL+++R+VS  EGK LAE +GLFFMETSALDS+NV  AFE V+KEIYN +SRKV++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SDSYK----AELSVNR--VSLADGAASSKKGFSCCS 215
           S        A LS  +  V  +DG    KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

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BLAST of CmaCh08G002510 vs. TrEMBL
Match: A0A0A0K5A2_CUCSA (RAB11G OS=Cucumis sativus GN=Csa_7G368110 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-108
Identity = 203/215 (94.42%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MA+++DQGGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           EVKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RRTTFDS KRWLDELGVHCDTATV
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSR 180
           +MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNV TAFELVI+EIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSR 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           KVLNSDSYKAELS NRVSLADG ASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

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BLAST of CmaCh08G002510 vs. TrEMBL
Match: A0A061DLV5_THECC (RAB GTPase A5B OS=Theobroma cacao GN=TCM_002700 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-98
Identity = 185/213 (86.85%), Postives = 201/213 (94.37%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E++ GEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK
Sbjct: 5   EEEERGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDS+KRWLDEL  HCDT   +ML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELSTHCDTTMARML 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEEGLFFMETSALDSTNV TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NSD+YKAELSVNRV+L  DGA SSK+GFSCC++
Sbjct: 185 NSDAYKAELSVNRVTLVKDGANSSKEGFSCCAR 217

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BLAST of CmaCh08G002510 vs. TrEMBL
Match: A0A0D2VJK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_N003900 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 3.1e-96
Identity = 180/213 (84.51%), Postives = 201/213 (94.37%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E++GGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   EEEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDS+KRWLDEL  HCDT   +M+
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELYTHCDTTVARMV 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEE LFFMETSAL+STNV TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEDLFFMETSALESTNVQTAFEVVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NS++YKAELSVNRV+L  DGA +SK+GFSCC++
Sbjct: 185 NSEAYKAELSVNRVTLVKDGANTSKEGFSCCAR 217

[Close]

BLAST of CmaCh08G002510 vs. TrEMBL
Match: A0A0D2NCZ6_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_001G229200 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.6e-95
Identity = 180/215 (83.72%), Postives = 198/215 (92.09%), Query Frame = 1


Query: 2   ASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE 61
           A +E+ GGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQ VEIDGKE
Sbjct: 71  AHEEEAGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQCVEIDGKE 130

Query: 62  VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVK 121
           VKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RR++FDS+KRWLDEL  HCDT   +
Sbjct: 131 VKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSIKRWLDELTTHCDTTLTR 190

Query: 122 MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRK 181
           MLVGNKCDLENIRDVSVEEGK+LAEEEGLFF+ETSAL+STNV TAFE+VI+EIYNNVSRK
Sbjct: 191 MLVGNKCDLENIRDVSVEEGKSLAEEEGLFFLETSALESTNVQTAFEIVIREIYNNVSRK 250

Query: 182 VLNSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
            LNSDSYK ELS N+V+L  DGA +SK GFSCC++
Sbjct: 251 ALNSDSYKGELSGNKVTLVKDGANASKTGFSCCAR 285

[Close]

BLAST of CmaCh08G002510 vs. TrEMBL
Match: B9GQQ0_POPTR (GTP-binding family protein OS=Populus trichocarpa GN=POPTR_0002s25100g PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.9e-94
Identity = 176/212 (83.02%), Postives = 198/212 (93.40%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E +GGEEYL+KIV+IGDSAVGKSNLLSRFARNEFD+NSKATIGVEFQTQVV+IDGKE+K
Sbjct: 6   EEGEGGEEYLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIK 65

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RRT+FDSVKRWLDELG HCDTA  +ML
Sbjct: 66  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARML 125

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDL++IR+VS +EGK+LAEEE LFFMETSALDSTNV  AFE+VI+EIYNN+SRK+L
Sbjct: 126 VGNKCDLDSIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKIL 185

Query: 184 NSDSYKAELSVNRVSLADGAASSKK-GFSCCS 215
           NSDSYKAEL+ NRVSL +G  SSKK GFSCC+
Sbjct: 186 NSDSYKAELTANRVSLVNGDTSSKKYGFSCCN 217

[Close]

BLAST of CmaCh08G002510 vs. TAIR10
Match: AT3G07410.1 (AT3G07410.1 RAB GTPase homolog A5B)

HSP 1 Score: 336.7 bits (862), Expect = 1.1e-92
Identity = 174/214 (81.31%), Postives = 192/214 (89.72%), Query Frame = 1


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKA 64
           ED  GEEYL+KIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGAFGALIVYDI+R  TF+SVKRWL EL  HCDTA  +MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLN 184
           GNKCDLE+IR VSVEEGK LAEEEGLFFMETSALD+TNV  AFE+VI+EI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDSYKAELSVNRVSLA---DGAASSKKGFSCCSQ 216
           SD+YKAELSVNRVSL    DG+ SS +  SCCS+
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of CmaCh08G002510 vs. TAIR10
Match: AT1G05810.1 (AT1G05810.1 RAB GTPase homolog A5E)

HSP 1 Score: 328.9 bits (842), Expect = 2.3e-90
Identity = 169/215 (78.60%), Postives = 188/215 (87.44%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           S +D+G EEYL+KIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKEV
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+RRTTF+SV RWLDEL +H DT   +M
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           LVGNKCDLENIR VSVEEGK LAEEEGLFF+ETSALDSTNV TAFE+VI +IYNNVSRK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDSYKAELSVNRVSLA---DGAASSKKGFSCCS 215
           LNSD+YK EL+VNRVSL    + A+    GFSCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 259

[Close]

BLAST of CmaCh08G002510 vs. TAIR10
Match: AT2G43130.1 (AT2G43130.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 325.9 bits (834), Expect = 1.9e-89
Identity = 164/213 (77.00%), Postives = 186/213 (87.32%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           SD+D+ GEEYL+KIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R +TF++V RWLDEL  H DT   KM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           L+GNKCDLE+IR VSVEEGK+LAE EGLFFMETSALDSTNV TAFE+VI+EIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           LNSDSYK EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of CmaCh08G002510 vs. TAIR10
Match: AT2G31680.1 (AT2G31680.1 RAB GTPase homolog A5D)

HSP 1 Score: 318.5 bits (815), Expect = 3.1e-87
Identity = 167/216 (77.31%), Postives = 190/216 (87.96%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           S +D+GGEEYL+KIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR+TF+SV RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           LVGNKCDLE+IR VSVEEGK LAE EGLFFMETSALDSTNV TAFE+VI++IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSYKAELSV-NRVSLA--DGAASSKK-GFSCCS 215
           LNSD+YK ELS+ NRVSL   D  +S++  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of CmaCh08G002510 vs. TAIR10
Match: AT5G47520.1 (AT5G47520.1 RAB GTPase homolog A5A)

HSP 1 Score: 265.0 bits (676), Expect = 4.0e-71
Identity = 144/216 (66.67%), Postives = 169/216 (78.24%), Query Frame = 1


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKA 64
           ED   E+YL+KIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKE+KA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR TF S+ RWL+EL  H D   V +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLN 184
           GNK DL+++R+VS  EGK LAE +GLFFMETSALDS+NV  AFE V+KEIYN +SRKV++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SDSYK----AELSVNR--VSLADGAASSKKGFSCCS 215
           S        A LS  +  V  +DG    KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of CmaCh08G002510 vs. NCBI nr
Match: gi|449463200|ref|XP_004149322.1| (PREDICTED: ras-related protein RABA5e [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 3.0e-108
Identity = 203/215 (94.42%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MA+++DQGGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           EVKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RRTTFDS KRWLDELGVHCDTATV
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSR 180
           +MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNV TAFELVI+EIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSR 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           KVLNSDSYKAELS NRVSLADG ASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

[Close]

BLAST of CmaCh08G002510 vs. NCBI nr
Match: gi|659116458|ref|XP_008458081.1| (PREDICTED: ras-related protein RABA5b [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 1.9e-107
Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           D+DQGGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK
Sbjct: 5   DDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRRTTFDS KRWLDELGVHCDTATV+ML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSAKRWLDELGVHCDTATVRML 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNV TAFELVI+EI+NNVSRKVL
Sbjct: 125 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIFNNVSRKVL 184

Query: 184 NSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           NSDSYKAELS NRVSLADG ASSKKGFSCCSQ
Sbjct: 185 NSDSYKAELSENRVSLADGGASSKKGFSCCSQ 216

[Close]

BLAST of CmaCh08G002510 vs. NCBI nr
Match: gi|590713362|ref|XP_007049622.1| (RAB GTPase A5B [Theobroma cacao])

HSP 1 Score: 365.9 bits (938), Expect = 4.7e-98
Identity = 185/213 (86.85%), Postives = 201/213 (94.37%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E++ GEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK
Sbjct: 5   EEEERGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDS+KRWLDEL  HCDT   +ML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELSTHCDTTMARML 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEEGLFFMETSALDSTNV TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NSD+YKAELSVNRV+L  DGA SSK+GFSCC++
Sbjct: 185 NSDAYKAELSVNRVTLVKDGANSSKEGFSCCAR 217

[Close]

BLAST of CmaCh08G002510 vs. NCBI nr
Match: gi|823266802|ref|XP_012466092.1| (PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii])

HSP 1 Score: 359.4 bits (921), Expect = 4.4e-96
Identity = 180/213 (84.51%), Postives = 201/213 (94.37%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E++GGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   EEEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDS+KRWLDEL  HCDT   +M+
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELYTHCDTTVARMV 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEE LFFMETSAL+STNV TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEDLFFMETSALESTNVQTAFEVVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NS++YKAELSVNRV+L  DGA +SK+GFSCC++
Sbjct: 185 NSEAYKAELSVNRVTLVKDGANTSKEGFSCCAR 217

[Close]

BLAST of CmaCh08G002510 vs. NCBI nr
Match: gi|823127027|ref|XP_012492242.1| (PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii])

HSP 1 Score: 356.3 bits (913), Expect = 3.8e-95
Identity = 180/215 (83.72%), Postives = 198/215 (92.09%), Query Frame = 1


Query: 2   ASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE 61
           A +E+ GGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQ VEIDGKE
Sbjct: 3   AHEEEAGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQCVEIDGKE 62

Query: 62  VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVK 121
           VKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RR++FDS+KRWLDEL  HCDT   +
Sbjct: 63  VKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSIKRWLDELTTHCDTTLTR 122

Query: 122 MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRK 181
           MLVGNKCDLENIRDVSVEEGK+LAEEEGLFF+ETSAL+STNV TAFE+VI+EIYNNVSRK
Sbjct: 123 MLVGNKCDLENIRDVSVEEGKSLAEEEGLFFLETSALESTNVQTAFEIVIREIYNNVSRK 182

Query: 182 VLNSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
            LNSDSYK ELS N+V+L  DGA +SK GFSCC++
Sbjct: 183 ALNSDSYKGELSGNKVTLVKDGANASKTGFSCCAR 217

The following BLAST results are available for this feature:

BLAST of CmaCh08G002510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA5B_ARATH	1.9e-91	81.31	Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1	[more]
RAA5E_ARATH	4.0e-89	78.60	Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1	[more]
RAA5C_ARATH	3.4e-88	77.00	Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1	[more]
RAA5D_ARATH	5.4e-86	77.31	Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1	[more]
RAA5A_ARATH	7.1e-70	66.67	Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1	[more]

BLAST of CmaCh08G002510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5A2_CUCSA	2.1e-108	94.42	RAB11G OS=Cucumis sativus GN=Csa_7G368110 PE=4 SV=1	[more]
A0A061DLV5_THECC	3.3e-98	86.85	RAB GTPase A5B OS=Theobroma cacao GN=TCM_002700 PE=4 SV=1	[more]
A0A0D2VJK7_GOSRA	3.1e-96	84.51	Uncharacterized protein OS=Gossypium raimondii GN=B456_N003900 PE=4 SV=1	[more]
A0A0D2NCZ6_GOSRA	2.6e-95	83.72	Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_001G229200 PE=...	[more]
B9GQQ0_POPTR	4.9e-94	83.02	GTP-binding family protein OS=Populus trichocarpa GN=POPTR_0002s25100g PE=4 SV=1	[more]

BLAST of CmaCh08G002510 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07410.1	1.1e-92	81.31	RAB GTPase homolog A5B	[more]
AT1G05810.1	2.3e-90	78.60	RAB GTPase homolog A5E	[more]
AT2G43130.1	1.9e-89	77.00	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT2G31680.1	3.1e-87	77.31	RAB GTPase homolog A5D	[more]
AT5G47520.1	4.0e-71	66.67	RAB GTPase homolog A5A	[more]

BLAST of CmaCh08G002510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463200\|ref\|XP_004149322.1\|	3.0e-108	94.42	PREDICTED: ras-related protein RABA5e [Cucumis sativus]	[more]
gi\|659116458\|ref\|XP_008458081.1\|	1.9e-107	95.28	PREDICTED: ras-related protein RABA5b [Cucumis melo]	[more]
gi\|590713362\|ref\|XP_007049622.1\|	4.7e-98	86.85	RAB GTPase A5B [Theobroma cacao]	[more]
gi\|823266802\|ref\|XP_012466092.1\|	4.4e-96	84.51	PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii]	[more]
gi\|823127027\|ref\|XP_012492242.1\|	3.8e-95	83.72	PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0010014	meristem initiation
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G002510.1	CmaCh08G002510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 score: 2.8
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..170 score: 1.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..213 score: 6.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..184 score: 1.78
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 2.6E-39coord: 14..35 score: 2.6E-39coord: 117..130 score: 2.6E-39coord: 152..174 score: 2.6E-39coord: 37..53 score: 2.6
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 6..215 score: 4.0E
None	No IPR available	PANTHER	PTHR24073:SF583	SUBFAMILY NOT NAMED	coord: 6..215 score: 4.0E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 score: 6.8
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..177 score: 6.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 score: 1.3E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 score: 6.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..213 score: 33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh08G002510	Cucsa.387790	Cucumber (Gy14) v1	cgycmaB1079
CmaCh08G002510	Cla014899	Watermelon (97103) v1	cmawmB856
CmaCh08G002510	Csa7G368110	Cucumber (Chinese Long) v2	cmacuB914
CmaCh08G002510	MELO3C021114	Melon (DHL92) v3.5.1	cmameB826
CmaCh08G002510	ClCG09G008440	Watermelon (Charleston Gray)	cmawcgB786
CmaCh08G002510	CSPI07G14840	Wild cucumber (PI 183967)	cmacpiB934
CmaCh08G002510	CmoCh08G002490	Cucurbita moschata (Rifu)	cmacmoB913
CmaCh08G002510	CmoCh17G012680	Cucurbita moschata (Rifu)	cmacmoB888
CmaCh08G002510	Cp4.1LG17g11320	Cucurbita pepo (Zucchini)	cmacpeB914
CmaCh08G002510	Cp4.1LG12g10780	Cucurbita pepo (Zucchini)	cmacpeB896
CmaCh08G002510	MELO3C021114.2	Melon (DHL92) v3.6.1	cmamedB924
CmaCh08G002510	CsaV3_7G026630	Cucumber (Chinese Long) v3	cmacucB1084
CmaCh08G002510	Cla97C09G171190	Watermelon (97103) v2	cmawmbB940
CmaCh08G002510	Bhi09G001051	Wax gourd	cmawgoB1130
CmaCh08G002510	CsGy7G013370	Cucumber (Gy14) v2	cgybcmaB973
CmaCh08G002510	Carg05072	Silver-seed gourd	carcmaB0112
CmaCh08G002510	Carg11477	Silver-seed gourd	carcmaB0021

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh08G002510	CmaCh17G012950	Cucurbita maxima (Rimu)	cmacmaB374

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh08G002510	Cucurbita pepo (Zucchini)	cmacpeB911
CmaCh08G002510	Bottle gourd (USVL1VR-Ls)	cmalsiB822