Cp4.1LG12g10780 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g10780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ras-related protein Rab-25
Location	Cp4.1LG12 : 9167318 .. 9169887 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACGGTGGTGGAGCGTCCTTCAAGATGAGCTGCAGTGTTATAGTTTCTCAGTGCCTTGAATTGCGCACACATTGATTTCGATTTCATCAAACACAGAATCAAAGGTGGTTGGGTCCCAATTCAAGCACCGAAATCTTGAAATTCATGAATTCCCCGATAATCATGGCGTCTTTCTGTACTTCCTGTCATGAGTTTGGAGTTATAGCATTACCATCACCCGTTTTGCACAGTACAAAAACCTCAACTCTAAGTTTTTCCTTCTTCATCTTCATCTATGGCGGCCGACGACGACCAGGGCGGCGAGGACTACTTGTTTAAGATTGTTCTGATTGGCGACTCTGCGGTGGGGAAATCGAACCTCCTCTCGCGGTTCGCTCGGAATGAGTTCGATAACAATTCCAAGGCCACGATCGGCGTCGAGTTTCAGACGCAAGTGGTGGAAATTGACGGCAAGGAGATCAAGGCTCAGATCTGGGACACCGCCGGCCAGGAGCGCTTTAGAGCTGTCACTTCAGCTTACTATCGCGGCGCCGTTGGCGCCCTTATTGTCTACGATATTAGCCGCCGGAGTAGCTTCGACAGCGTCAAGCGGTGGCTCGACGAGCTCGGCGGTACGTTCTCTTCGAATCTGCATGGTTGCTTTACTCTTCTGTTTGTTTGCAGAAGCAATTTATGGAACTGAATCGAATTTCTTTCTTCGGTTCATTAGAATCTGCTGTTGGTTTGGTTTATTGATTCTTTGATTTGCAAGGAACTGTAAGAAACATGGCAATGATAGAAAATCCACTGTTCTTGGTTATTCTACTGCTTCTTGTAGGAAAGCTGGATTAGATTAGATCAAAAGGATGAACGAGTTGCTTTTGATCTTACTTACTGGACTTACTTCAGTGAGTAATTTGTTATAAACTAAAGAATTGACTAGTGGTGAGGCTTCCCAAATTCATACCAAAAAACAACAGTTTAGCCCTGTGTAATGTTTGAAAACAGATTCAAAAAGAAAAGGCAAGGACCTTGTTTCTTAGCTCATAAGTCACTTCTAGTCAATTTTAGGACAAACTTCCTTGTTCTTCGGGCATTTGGTGATAATGAAATTTGAATTTCAGTTTATGGCATGTGAAGTTATTAAAGAATAGCTGCTTAGTTTTTATAGGTCTATCATTGGAAGTGACATGGTGTTAGTAACTGTTGAATCAATGACCCAAGAACTTTTTCTTCAAATTTTGAATGGTATGCTTTTTGGGCTCTCAACAATATCTGTTAGCGGTGGGCTTGGACAATTACAGATGGTATTAGAGCCAGGCATCGGGCGATGTGCTAGTGAGAAGACTGAGCCCCGAAGGGGGTGAACACGAGGCAATGTGCCAGCAAGGACGTTTGCCTCGAAGATGATGGATTGGAGGGTCCCACATCGATTGGAAAAGAGAACAAGTGCCAGCGAGGACGCTGGGCCCTGAAGGGGGTGGATTGTAAGATCCACATCGGTTGGGGAGGAGAACGAAACATTGTTTATAAGGGTGTGAAAACTTCTTGTTTAAAAACTTTGAGGGAAAACTCAAAGAGGACAATATTTGCTAGCGTTGGACTCTTATTCTTAGTTGAACAGGAAGAATTGACGAATGATATACTTTTTGAGTCTCTTCATATCTTCACGTCGATATAATATTGTCCGCTTGCATGGTTTGCCTCATGTTCCTAACACCCAATATAGTTGTTTCTCTTTACTTTGTATGGGCTACATTTACTTAGATATCTAGATAGGTAATTAAAGCAAGCAAATCTCATACATAATCTCATACTTCATTGTCATTTGCAATTTATAAGATTATGAACTGAAGAAGCTTCCTCTCCTGCTACCGTTTGCAGTGCATTGTGATACGGCGACGATAAGGATGTTGGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGCATGTTGGGGAAGGCAAGTATCTAGCAGAAGAGGAAGGACTGTTCTTCATGGAAACCTCTGCTCTTGATTCCACCAATGTCAAAACAGCCTTTGAGCTTATTGTTAGGGAGATTTACAACAATGTCACCAGGAAAGCCCTCAACTCTGACTCTCACAAGGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCCGATGCGGGAGCCTCGTCCAAAAAAGGCTTCTCGTGTTGCTCTCAATGAGGTTCATGTTCTCCCTCCCAAATTTTTAGCTCTGAGGATTGTATTCGATAAGTCTAACAGGTCTCTAAAATTTAGGTTTCGAACCAATTCATTCTCAAACTTTCAATAGTTTCGTGTCTGAGAAAGTTCGAGAGTTTACTAGAAATCCTAAAGGGACTGGGAGAGTACCATTGTTTTGTATTGTTCTTATCAATGTCCTCATGTGTCTCTTCAAGATTATCCATTCTAGAACGGTTTAGATGAATTATTCCAAAAATAGAAATTAAAAGATAAATAAGTAATTGCAAATATTATGATTTGAAAACTTAAATACCTGAAATTTTGCCACGCAAATGCTTATATAGTTGGAATATCCATAAAAATTAATTAAATTAATCGGTGATTTATAAATTTT

mRNA sequence

TGGACGGTGGTGGAGCGTCCTTCAAGATGAGCTGCAGTGTTATAGTTTCTCAGTGCCTTGAATTGCGCACACATTGATTTCGATTTCATCAAACACAGAATCAAAGGTGGTTGGGTCCCAATTCAAGCACCGAAATCTTGAAATTCATGAATTCCCCGATAATCATGGCGTCTTTCTGTACTTCCTGTCATGAGTTTGGAGTTATAGCATTACCATCACCCGTTTTGCACAGTACAAAAACCTCAACTCTAAGTTTTTCCTTCTTCATCTTCATCTATGGCGGCCGACGACGACCAGGGCGGCGAGGACTACTTGTTTAAGATTGTTCTGATTGGCGACTCTGCGGTGGGGAAATCGAACCTCCTCTCGCGGTTCGCTCGGAATGAGTTCGATAACAATTCCAAGGCCACGATCGGCGTCGAGTTTCAGACGCAAGTGGTGGAAATTGACGGCAAGGAGATCAAGGCTCAGATCTGGGACACCGCCGGCCAGGAGCGCTTTAGAGCTGTCACTTCAGCTTACTATCGCGGCGCCGTTGGCGCCCTTATTGTCTACGATATTAGCCGCCGGAGTAGCTTCGACAGCGTCAAGCGGTGGCTCGACGAGCTCGGCGTGCATTGTGATACGGCGACGATAAGGATGTTGGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGCATGTTGGGGAAGGCAAGTATCTAGCAGAAGAGGAAGGACTGTTCTTCATGGAAACCTCTGCTCTTGATTCCACCAATGTCAAAACAGCCTTTGAGCTTATTGTTAGGGAGATTTACAACAATGTCACCAGGAAAGCCCTCAACTCTGACTCTCACAAGGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCCGATGCGGGAGCCTCGTCCAAAAAAGGCTTCTCGTGTTGCTCTCAATGAGGTTCATGTTCTCCCTCCCAAATTTTTAGCTCTGAGGATTGTATTCGATAAGTCTAACAGGTCTCTAAAATTTAGGTTTCGAACCAATTCATTCTCAAACTTTCAATAGTTTCGTGTCTGAGAAAGTTCGAGAGTTTACTAGAAATCCTAAAGGGACTGGGAGAGTACCATTGTTTTGTATTGTTCTTATCAATGTCCTCATGTGTCTCTTCAAGATTATCCATTCTAGAACGGTTTAGATGAATTATTCCAAAAATAGAAATTAAAAGATAAATAAGTAATTGCAAATATTATGATTTGAAAACTTAAATACCTGAAATTTTGCCACGCAAATGCTTATATAGTTGGAATATCCATAAAAATTAATTAAATTAATCGGTGATTTATAAATTTT

Coding sequence (CDS)

ATGGCGGCCGACGACGACCAGGGCGGCGAGGACTACTTGTTTAAGATTGTTCTGATTGGCGACTCTGCGGTGGGGAAATCGAACCTCCTCTCGCGGTTCGCTCGGAATGAGTTCGATAACAATTCCAAGGCCACGATCGGCGTCGAGTTTCAGACGCAAGTGGTGGAAATTGACGGCAAGGAGATCAAGGCTCAGATCTGGGACACCGCCGGCCAGGAGCGCTTTAGAGCTGTCACTTCAGCTTACTATCGCGGCGCCGTTGGCGCCCTTATTGTCTACGATATTAGCCGCCGGAGTAGCTTCGACAGCGTCAAGCGGTGGCTCGACGAGCTCGGCGTGCATTGTGATACGGCGACGATAAGGATGTTGGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGCATGTTGGGGAAGGCAAGTATCTAGCAGAAGAGGAAGGACTGTTCTTCATGGAAACCTCTGCTCTTGATTCCACCAATGTCAAAACAGCCTTTGAGCTTATTGTTAGGGAGATTTACAACAATGTCACCAGGAAAGCCCTCAACTCTGACTCTCACAAGGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCCGATGCGGGAGCCTCGTCCAAAAAAGGCTTCTCGTGTTGCTCTCAATGA

Protein sequence

MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ

Homology

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BLAST of Cp4.1LG12g10780 vs. Swiss-Prot
Match: RAA5E_ARATH (Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.4e-88
Identity = 165/215 (76.74%), Postives = 191/215 (88.84%), Query Frame = 1


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+G E+YLFKIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKE+
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR++F+SV RWLDEL +H DT   RM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           LVGNKCDLENIR V V EGK LAEEEGLFF+ETSALDSTNVKTAFE+++ +IYNNV+RK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDSHKAELSVNRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K EL+VNRVSL  D  ++SK+  GFSCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 216

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BLAST of Cp4.1LG12g10780 vs. Swiss-Prot
Match: RAA5B_ARATH (Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.3e-87
Identity = 166/218 (76.15%), Postives = 189/218 (86.70%), Query Frame = 1


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           M  +DD+G E+YLFKIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GK
Sbjct: 1   MGKEDDRG-EEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  +F+SVKRWL EL  HCDTA  
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVA 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           +MLVGNKCDLE+IR V V EGK LAEEEGLFFMETSALD+TNV  AFE+++REI+NNV+R
Sbjct: 121 QMLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLA---DAGASSKKGFSCCSQ 216
           K LNSD++KAELSVNRVSL    D   SS +  SCCS+
Sbjct: 181 KLLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

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BLAST of Cp4.1LG12g10780 vs. Swiss-Prot
Match: RAA5C_ARATH (Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 4.9e-87
Identity = 159/213 (74.65%), Postives = 185/213 (86.85%), Query Frame = 1


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           +DDD+ GE+YLFKIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKE+
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R S+F++V RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           L+GNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNVKTAFE+++REIY+N++RK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           LNSDS+K EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

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BLAST of Cp4.1LG12g10780 vs. Swiss-Prot
Match: RAA5D_ARATH (Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.4e-86
Identity = 165/216 (76.39%), Postives = 189/216 (87.50%), Query Frame = 1


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+GGE+YLFKIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKE+
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRS+F+SV RWLDEL  H DT   RM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           LVGNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNVKTAFE+++R+IY N++RK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSHKAELSV-NRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K ELS+ NRVSL  D   SS +  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Cp4.1LG12g10780 vs. Swiss-Prot
Match: RAA5A_ARATH (Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.9e-69
Identity = 140/216 (64.81%), Postives = 167/216 (77.31%), Query Frame = 1


Query: 5   DDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKA 64
           +D   EDYLFKIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKEIKA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRMLV 124
           QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR +F S+ RWL+EL  H D   + +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKALN 184
           GNK DL+++R+V   EGK LAE +GLFFMETSALDS+NV  AFE +V+EIYN ++RK ++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SD----SHKAELSVNR--VSLADAGASSKKGFSCCS 215
           S        A LS  +  V  +D     KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

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BLAST of Cp4.1LG12g10780 vs. TrEMBL
Match: A0A0A0K5A2_CUCSA (RAB11G OS=Cucumis sativus GN=Csa_7G368110 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.1e-106
Identity = 196/215 (91.16%), Postives = 208/215 (96.74%), Query Frame = 1


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAA+DDQGGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+RR++FDS KRWLDELGVHCDTAT+
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFEL++REIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           K LNSDS+KAELS NRVSLAD GASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. TrEMBL
Match: A0A061DLV5_THECC (RAB GTPase A5B OS=Theobroma cacao GN=TCM_002700 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.6e-97
Identity = 182/213 (85.45%), Postives = 200/213 (93.90%), Query Frame = 1


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           ++++ GE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   EEEERGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDS+KRWLDEL  HCDT   RML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELSTHCDTTMARML 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKAL 183
           VGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFE+++REIYNNV+RKAL
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNVSRKAL 184

Query: 184 NSDSHKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           NSD++KAELSVNRV+L   GA SSK+GFSCC++
Sbjct: 185 NSDAYKAELSVNRVTLVKDGANSSKEGFSCCAR 217

[Close]

BLAST of Cp4.1LG12g10780 vs. TrEMBL
Match: A0A0D2VJK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_N003900 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 9.0e-96
Identity = 179/213 (84.04%), Postives = 200/213 (93.90%), Query Frame = 1


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           ++++GGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK
Sbjct: 5   EEEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDS+KRWLDEL  HCDT   RM+
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELYTHCDTTVARMV 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKAL 183
           VGNKCDLENIRDV V EGK LAEEE LFFMETSAL+STNV+TAFE+++REIYNNV+RKAL
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEDLFFMETSALESTNVQTAFEVVIREIYNNVSRKAL 184

Query: 184 NSDSHKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           NS+++KAELSVNRV+L   GA +SK+GFSCC++
Sbjct: 185 NSEAYKAELSVNRVTLVKDGANTSKEGFSCCAR 217

[Close]

BLAST of Cp4.1LG12g10780 vs. TrEMBL
Match: A0A0D2NCZ6_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_001G229200 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.7e-94
Identity = 177/215 (82.33%), Postives = 197/215 (91.63%), Query Frame = 1


Query: 2   AADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE 61
           A +++ GGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQ VEIDGKE
Sbjct: 71  AHEEEAGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQCVEIDGKE 130

Query: 62  IKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIR 121
           +KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+RRSSFDS+KRWLDEL  HCDT   R
Sbjct: 131 VKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSIKRWLDELTTHCDTTLTR 190

Query: 122 MLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRK 181
           MLVGNKCDLENIRDV V EGK LAEEEGLFF+ETSAL+STNV+TAFE+++REIYNNV+RK
Sbjct: 191 MLVGNKCDLENIRDVSVEEGKSLAEEEGLFFLETSALESTNVQTAFEIVIREIYNNVSRK 250

Query: 182 ALNSDSHKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           ALNSDS+K ELS N+V+L   GA +SK GFSCC++
Sbjct: 251 ALNSDSYKGELSGNKVTLVKDGANASKTGFSCCAR 285

[Close]

BLAST of Cp4.1LG12g10780 vs. TrEMBL
Match: A0A067L9Z5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15126 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 9.3e-93
Identity = 176/212 (83.02%), Postives = 192/212 (90.57%), Query Frame = 1


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           A   +GGE+YLFKIVLIGDSAVGKSNLLSRFARNEFD+NSKATIGVEFQTQVV+IDGKEI
Sbjct: 4   AQQGEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEI 63

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+RR+SFDSVKRWL+EL  HCDTA  RM
Sbjct: 64  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLEELSTHCDTAVARM 123

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           LVGNKCDLENIR+V V EGK LAEEE LFFMETSALDSTNV+TAFE+++REIY NV+RK 
Sbjct: 124 LVGNKCDLENIREVSVEEGKSLAEEESLFFMETSALDSTNVQTAFEVVIREIYKNVSRKI 183

Query: 183 LNSDSHKAELSVNRVSLADAGASSKKGFSCCS 215
           LNSDS+KAEL+VNRVSL   GA  +  FSCCS
Sbjct: 184 LNSDSYKAELTVNRVSLVKDGA-KQSSFSCCS 214

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR10
Match: AT1G05810.1 (AT1G05810.1 RAB GTPase homolog A5E)

HSP 1 Score: 325.5 bits (833), Expect = 2.5e-89
Identity = 165/215 (76.74%), Postives = 191/215 (88.84%), Query Frame = 1


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+G E+YLFKIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKE+
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR++F+SV RWLDEL +H DT   RM
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           LVGNKCDLENIR V V EGK LAEEEGLFF+ETSALDSTNVKTAFE+++ +IYNNV+RK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDSHKAELSVNRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K EL+VNRVSL  D  ++SK+  GFSCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 259

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR10
Match: AT3G07410.1 (AT3G07410.1 RAB GTPase homolog A5B)

HSP 1 Score: 323.9 bits (829), Expect = 7.3e-89
Identity = 166/218 (76.15%), Postives = 189/218 (86.70%), Query Frame = 1


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           M  +DD+G E+YLFKIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GK
Sbjct: 1   MGKEDDRG-EEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  +F+SVKRWL EL  HCDTA  
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVA 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           +MLVGNKCDLE+IR V V EGK LAEEEGLFFMETSALD+TNV  AFE+++REI+NNV+R
Sbjct: 121 QMLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLA---DAGASSKKGFSCCSQ 216
           K LNSD++KAELSVNRVSL    D   SS +  SCCS+
Sbjct: 181 KLLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR10
Match: AT2G43130.1 (AT2G43130.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 322.0 bits (824), Expect = 2.8e-88
Identity = 159/213 (74.65%), Postives = 185/213 (86.85%), Query Frame = 1


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           +DDD+ GE+YLFKIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKE+
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R S+F++V RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           L+GNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNVKTAFE+++REIY+N++RK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           LNSDS+K EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR10
Match: AT2G31680.1 (AT2G31680.1 RAB GTPase homolog A5D)

HSP 1 Score: 319.7 bits (818), Expect = 1.4e-87
Identity = 165/216 (76.39%), Postives = 189/216 (87.50%), Query Frame = 1


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+GGE+YLFKIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKE+
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRS+F+SV RWLDEL  H DT   RM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           LVGNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNVKTAFE+++R+IY N++RK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSHKAELSV-NRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K ELS+ NRVSL  D   SS +  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR10
Match: AT5G47520.1 (AT5G47520.1 RAB GTPase homolog A5A)

HSP 1 Score: 261.5 bits (667), Expect = 4.4e-70
Identity = 140/216 (64.81%), Postives = 167/216 (77.31%), Query Frame = 1


Query: 5   DDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKA 64
           +D   EDYLFKIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKEIKA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRMLV 124
           QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR +F S+ RWL+EL  H D   + +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKALN 184
           GNK DL+++R+V   EGK LAE +GLFFMETSALDS+NV  AFE +V+EIYN ++RK ++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SD----SHKAELSVNR--VSLADAGASSKKGFSCCS 215
           S        A LS  +  V  +D     KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: gi|449463200|ref|XP_004149322.1| (PREDICTED: ras-related protein RABA5e [Cucumis sativus])

HSP 1 Score: 394.0 bits (1011), Expect = 1.6e-106
Identity = 196/215 (91.16%), Postives = 208/215 (96.74%), Query Frame = 1


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAA+DDQGGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+RR++FDS KRWLDELGVHCDTAT+
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFEL++REIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           K LNSDS+KAELS NRVSLAD GASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: gi|659116458|ref|XP_008458081.1| (PREDICTED: ras-related protein RABA5b [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 2.3e-105
Identity = 194/212 (91.51%), Postives = 205/212 (96.70%), Query Frame = 1


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           DDDQGGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   DDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR++FDS KRWLDELGVHCDTAT+RML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSAKRWLDELGVHCDTATVRML 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKAL 183
           VGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFEL++REI+NNV+RK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIFNNVSRKVL 184

Query: 184 NSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           NSDS+KAELS NRVSLAD GASSKKGFSCCSQ
Sbjct: 185 NSDSYKAELSENRVSLADGGASSKKGFSCCSQ 216

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: gi|590713362|ref|XP_007049622.1| (RAB GTPase A5B [Theobroma cacao])

HSP 1 Score: 363.6 bits (932), Expect = 2.4e-97
Identity = 182/213 (85.45%), Postives = 200/213 (93.90%), Query Frame = 1


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           ++++ GE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   EEEERGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDS+KRWLDEL  HCDT   RML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELSTHCDTTMARML 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKAL 183
           VGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFE+++REIYNNV+RKAL
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNVSRKAL 184

Query: 184 NSDSHKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           NSD++KAELSVNRV+L   GA SSK+GFSCC++
Sbjct: 185 NSDAYKAELSVNRVTLVKDGANSSKEGFSCCAR 217

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: gi|823266802|ref|XP_012466092.1| (PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii])

HSP 1 Score: 357.8 bits (917), Expect = 1.3e-95
Identity = 179/213 (84.04%), Postives = 200/213 (93.90%), Query Frame = 1


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           ++++GGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK
Sbjct: 5   EEEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDS+KRWLDEL  HCDT   RM+
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELYTHCDTTVARMV 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKAL 183
           VGNKCDLENIRDV V EGK LAEEE LFFMETSAL+STNV+TAFE+++REIYNNV+RKAL
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEDLFFMETSALESTNVQTAFEVVIREIYNNVSRKAL 184

Query: 184 NSDSHKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           NS+++KAELSVNRV+L   GA +SK+GFSCC++
Sbjct: 185 NSEAYKAELSVNRVTLVKDGANTSKEGFSCCAR 217

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: gi|823127027|ref|XP_012492242.1| (PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii])

HSP 1 Score: 353.6 bits (906), Expect = 2.4e-94
Identity = 177/215 (82.33%), Postives = 197/215 (91.63%), Query Frame = 1


Query: 2   AADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE 61
           A +++ GGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQ VEIDGKE
Sbjct: 3   AHEEEAGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQCVEIDGKE 62

Query: 62  IKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIR 121
           +KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+RRSSFDS+KRWLDEL  HCDT   R
Sbjct: 63  VKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSIKRWLDELTTHCDTTLTR 122

Query: 122 MLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRK 181
           MLVGNKCDLENIRDV V EGK LAEEEGLFF+ETSAL+STNV+TAFE+++REIYNNV+RK
Sbjct: 123 MLVGNKCDLENIRDVSVEEGKSLAEEEGLFFLETSALESTNVQTAFEIVIREIYNNVSRK 182

Query: 182 ALNSDSHKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           ALNSDS+K ELS N+V+L   GA +SK GFSCC++
Sbjct: 183 ALNSDSYKGELSGNKVTLVKDGANASKTGFSCCAR 217

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA5E_ARATH	4.4e-88	76.74	Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1	[more]
RAA5B_ARATH	1.3e-87	76.15	Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1	[more]
RAA5C_ARATH	4.9e-87	74.65	Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1	[more]
RAA5D_ARATH	2.4e-86	76.39	Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1	[more]
RAA5A_ARATH	7.9e-69	64.81	Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1	[more]

BLAST of Cp4.1LG12g10780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5A2_CUCSA	1.1e-106	91.16	RAB11G OS=Cucumis sativus GN=Csa_7G368110 PE=4 SV=1	[more]
A0A061DLV5_THECC	1.6e-97	85.45	RAB GTPase A5B OS=Theobroma cacao GN=TCM_002700 PE=4 SV=1	[more]
A0A0D2VJK7_GOSRA	9.0e-96	84.04	Uncharacterized protein OS=Gossypium raimondii GN=B456_N003900 PE=4 SV=1	[more]
A0A0D2NCZ6_GOSRA	1.7e-94	82.33	Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_001G229200 PE=...	[more]
A0A067L9Z5_JATCU	9.3e-93	83.02	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15126 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g10780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05810.1	2.5e-89	76.74	RAB GTPase homolog A5E	[more]
AT3G07410.1	7.3e-89	76.15	RAB GTPase homolog A5B	[more]
AT2G43130.1	2.8e-88	74.65	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT2G31680.1	1.4e-87	76.39	RAB GTPase homolog A5D	[more]
AT5G47520.1	4.4e-70	64.81	RAB GTPase homolog A5A	[more]

BLAST of Cp4.1LG12g10780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463200\|ref\|XP_004149322.1\|	1.6e-106	91.16	PREDICTED: ras-related protein RABA5e [Cucumis sativus]	[more]
gi\|659116458\|ref\|XP_008458081.1\|	2.3e-105	91.51	PREDICTED: ras-related protein RABA5b [Cucumis melo]	[more]
gi\|590713362\|ref\|XP_007049622.1\|	2.4e-97	85.45	RAB GTPase A5B [Theobroma cacao]	[more]
gi\|823266802\|ref\|XP_012466092.1\|	1.3e-95	84.04	PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii]	[more]
gi\|823127027\|ref\|XP_012492242.1\|	2.4e-94	82.33	PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0010014	meristem initiation
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10780.1	Cp4.1LG12g10780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 score: 1.6
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..170 score: 2.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..213 score: 5.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..183 score: 7.94
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 117..130 score: 1.6E-40coord: 152..174 score: 1.6E-40coord: 14..35 score: 1.6E-40coord: 37..53 score: 1.6E-40coord: 55..77 score: 1.6
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 6..215 score: 2.7E
None	No IPR available	PANTHER	PTHR24073:SF583	SUBFAMILY NOT NAMED	coord: 6..215 score: 2.7E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 score: 1.9
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..177 score: 3.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 score: 1.9E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 score: 2.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..213 score: 33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g10780	Cucsa.387790	Cucumber (Gy14) v1	cgycpeB1027
Cp4.1LG12g10780	CmaCh17G012950	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g10780	CmaCh08G002510	Cucurbita maxima (Rimu)	cmacpeB896
Cp4.1LG12g10780	CmoCh08G002490	Cucurbita moschata (Rifu)	cmocpeB834
Cp4.1LG12g10780	CmoCh17G012680	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g10780	Cla014899	Watermelon (97103) v1	cpewmB135
Cp4.1LG12g10780	Csa7G368110	Cucumber (Chinese Long) v2	cpecuB157
Cp4.1LG12g10780	MELO3C021114	Melon (DHL92) v3.5.1	cpemeB119
Cp4.1LG12g10780	ClCG09G008440	Watermelon (Charleston Gray)	cpewcgB129
Cp4.1LG12g10780	CSPI07G14840	Wild cucumber (PI 183967)	cpecpiB159
Cp4.1LG12g10780	MELO3C021114.2	Melon (DHL92) v3.6.1	cpemedB146
Cp4.1LG12g10780	CsaV3_7G026630	Cucumber (Chinese Long) v3	cpecucB0182
Cp4.1LG12g10780	Bhi09G001051	Wax gourd	cpewgoB0209
Cp4.1LG12g10780	CsGy7G013370	Cucumber (Gy14) v2	cgybcpeB900
Cp4.1LG12g10780	Carg05072	Silver-seed gourd	carcpeB0116
Cp4.1LG12g10780	Carg11477	Silver-seed gourd	carcpeB0018

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g10780	Cp4.1LG17g11320	Cucurbita pepo (Zucchini)	cpecpeB160

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g10780	Cucurbita pepo (Zucchini)	cpecpeB153
Cp4.1LG12g10780	Bottle gourd (USVL1VR-Ls)	cpelsiB111