Carg05072 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05072
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein like
Location	Cucurbita_argyrosperma_scaffold_060 : 1203368 .. 1206297 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATGAGGTTGTAGTTATAGTCATTACTATCCATTTCGGACCGCACAAAAACCTCCATTGCAAGCTTCTTCATCTTCTTCATCTGCATCAATGGCGAGTGACGAGGATCAGGGCGGTGAGGAGTACTTGTACAAGATTGTCCTTATTGGCGACTCTGCTGTGGGCAAATCGAACCTCCTCTCGCGATTTGCTCGGAATGAGTTCGATACCAACTCCAAGGCTACAATCGGCGTCGAGTTTCAGACTCAAGTGGTGGAAATCGACGGCAAAGAGGTGAAGGCTCAGATCTGGGATACTGCTGGCCAGGAGCGATTTAGGGCTGTCACTTCGGCCTACTATCGCGGCGCTTTTGGTGCGCTGATTGTCTACGATATCAGCCGTCGGACAACCTTCGACAGTGTCAAGCGGTGGCTCGACGAGCTCGGCGGTACGTTCTCTTTGAATCTTTCTGGTTGCTTTACTGTTCAGTTTGTTTGCAGAAGCTTTATAAATCCAATTTTTTGCTTCTGTGTACTAGAATCTGTCGCTGGTTTTGTTTATTGATTCTTTGATTTGTGTAGAACTGTAAGTAAGACAAGAATGATGGAAAATTCAGGGTTATTGTTCATTCTTCTTTTGTTGGGGGGAAAGCTGGATTAGATTGGTGAAAAAGGTTGAATCATGTGTTCTTTTACTTCTTAAAGTTGCTTCAGTGAGTAGTTTTTAATGTACTAAAGGATGAACAGTGTTGAGGTTTGCCAAATTTACATCCAAGAGAATTGTATATTGTTTAGACCCGTGTACTGGTTGAAATCAGATACAAAAGGAAAAGTGTGGAGGGACCTTAATTGTTAATTTTGTTCACTTTGAGCATAATTTCTTTGAGCCTAAGTTCTTATGGCTTTGGACTTCCCCCGAAAGACCTCATACCAATGGAGAGAGTATTCTTTGATCATAAACCTATGATCATTCCCTAAATAAGTGGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGTACGCCTCCCCTTAATCGAGACTCGACTTCTTTTTCTTTTGGAGTCTTAGTCATTTTTACTATGCCTTCGAGGAAGCTCGACTCCTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATGACTCTAATACCATATTAGATGAACATGACTCTCCACCATGGTATGATATTGTCCACTTTGAGCATAAGTTCTCATGGCTTTGCTTTGGGCTTCTCCAGAAGGCCTCACTCCACGTCGAGGGACTTTCAATATCTAGTCAAATTTAGGGCAACTGCTTGTCAACCCATTATAGTGAAGTTTGAACTTCATTTTGTGGCATTTGAAGGTATTACGGAATAGTTGCTTAGTCGGTCCAGGCCTATCCTAACAAGTGACTAGATGTTAGTTACTTTTTGTTTTTTTTTTTTCAGTTCAAGCATCAACATACGTTTTGATCTCCAATTTATGCCTTAACCAAATGAACTTTGCTTAGGTTGGTAGGGGTTAGTCACCATTGAATCAAGGACCTAATAACTTCTTTTTCCAAAATTTGAATGGTATGCTTTCTCATTTGAAAATGAATAAGAAACCAATGGATATATTTTTTAGTCTCTATATTTCACGATGTTGTCCTGTAACAACCTAAGTCTACCGCTACCAAATATTGTATTCTTGAGTTTTTCCCTTGGCTTCCTTTTCAGAGTTTCAAAGGAGAAGTTTCCACACCTTTATAAGGAATGCTTCATTTTCATATGAGAAGTTTCCACGTTTACCCTTTGCTTCCTTCTCAAAGTCTTAAAGGATAAGTTTCCACACTCTTACAAGGAATGCTTCATTTTCATAGAAGTTTCCACATTTTCCCTGGCTCCCTTCTCAGAGTTTCAAAAGAGAAATTTCCACGCCCTTATAAGGAATGCTTCATTTTCATAGAAGTTTGCACGTTTTCTCTTAGCTCCCTTCTCAAAGTTTCAAAGGAGAAGTTTCCACACCCTTATAAGGAATGCTTCATTTTCATAGAAGAAGTTTCCACACCTTTATAAGGAACGATGCTTCATTTTCATTGGGCATCTTCTCCGATGTCTGGCTCTGATACCATTTGTAATGGCTAGCCCACTAGCAAACATTGTCTTCTTTGAGCTTTTCCTTCTGGGATTTCCTCAAAGTTTTTAAATGCATATACTAGGAGGAGAGGTTTCCATACTCTTATAAGGGATGATTCGTTCTTCTCTCAAACCAACGTGGAATCTCACATATCAACCCTAAACTAAACTAAATTTTAATGTTAATAGTGATATTGCTTATACTCGAACATAGTTGTTTCTCTTGCTAGGGTATGGGTTACATTGACATCTTTGTATCTCTAGATAGGTCTATAAAGCAAGCAAGAAACCATCCCTCTGTGAACATGATCTCATACCTTCATTGTGGTTTGCAATTTGTAAGATTATAATAAACTAACGTATCCCTCTCGAAACGATTACAGTTCATTGTGATACCGCGACGGTGAAGATGCTGGTAGGAAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGCAAGAATCTGGCAGAAGAGGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTCAGAACAGCCTTTGAGCTTGTGATTAAGGAGATTTACAACAATGTCAGCAGGAAAGTCCTCAACTCTGATTCTTATAAAGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCTGATGGGGCTGCCTCCTCCAAAAAAGGCTTCTCTTGTTGTTCTCAATGAGTTTCGAGTTTTTTTTTTCTCGAGTCAAATTTTAAAAAATATTTAATAGGCCAAAGTCCTGTTAGACGTATTAAAAGTGAGATTTATTAGATATCAAATGGAAAGTTTATGGACT

mRNA sequence

TCATGAGGTTGTAGTTATAGTCATTACTATCCATTTCGGACCGCACAAAAACCTCCATTGCAAGCTTCTTCATCTTCTTCATCTGCATCAATGGCGAGTGACGAGGATCAGGGCGGTGAGGAGTACTTGTACAAGATTGTCCTTATTGGCGACTCTGCTGTGGGCAAATCGAACCTCCTCTCGCGATTTGCTCGGAATGAGTTCGATACCAACTCCAAGGCTACAATCGGCGTCGAGTTTCAGACTCAAGTGGTGGAAATCGACGGCAAAGAGGTGAAGGCTCAGATCTGGGATACTGCTGGCCAGGAGCGATTTAGGGCTGTCACTTCGGCCTACTATCGCGGCGCTTTTGGTGCGCTGATTGTCTACGATATCAGCCGTCGGACAACCTTCGACAGTGTCAAGCGGTGGCTCGACGAGCTCGGCGTTCATTGTGATACCGCGACGGTGAAGATGCTGGTAGGAAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGCAAGAATCTGGCAGAAGAGGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTCAGAACAGCCTTTGAGCTTGTGATTAAGGAGATTTACAACAATGTCAGCAGGAAAGTCCTCAACTCTGATTCTTATAAAGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCTGATGGGGCTGCCTCCTCCAAAAAAGGCTTCTCTTGTTGTTCTCAATGAGTTTCGAGTTTTTTTTTTCTCGAGTCAAATTTTAAAAAATATTTAATAGGCCAAAGTCCTGTTAGACGTATTAAAAGTGAGATTTATTAGATATCAAATGGAAAGTTTATGGACT

Coding sequence (CDS)

ATGGCGAGTGACGAGGATCAGGGCGGTGAGGAGTACTTGTACAAGATTGTCCTTATTGGCGACTCTGCTGTGGGCAAATCGAACCTCCTCTCGCGATTTGCTCGGAATGAGTTCGATACCAACTCCAAGGCTACAATCGGCGTCGAGTTTCAGACTCAAGTGGTGGAAATCGACGGCAAAGAGGTGAAGGCTCAGATCTGGGATACTGCTGGCCAGGAGCGATTTAGGGCTGTCACTTCGGCCTACTATCGCGGCGCTTTTGGTGCGCTGATTGTCTACGATATCAGCCGTCGGACAACCTTCGACAGTGTCAAGCGGTGGCTCGACGAGCTCGGCGTTCATTGTGATACCGCGACGGTGAAGATGCTGGTAGGAAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGCAAGAATCTGGCAGAAGAGGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTCAGAACAGCCTTTGAGCTTGTGATTAAGGAGATTTACAACAATGTCAGCAGGAAAGTCCTCAACTCTGATTCTTATAAAGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCTGATGGGGCTGCCTCCTCCAAAAAAGGCTTCTCTTGTTGTTCTCAATGA

Protein sequence

MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ

Homology

[Close]

BLAST of Carg05072 vs. NCBI nr
Match: XP_022959843.1 (ras-related protein RABA5b-like [Cucurbita moschata] >XP_023514429.1 ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 420.2 bits (1079), Expect = 4.1e-114
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGK 60
           MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSR 180
           KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSR
Sbjct: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSR 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 215

[Close]

BLAST of Carg05072 vs. NCBI nr
Match: XP_023004189.1 (ras-related protein RABA5b-like [Cucurbita maxima])

HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-112
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGK 60
           MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFD NSKATIGVEFQTQVVEIDGK
Sbjct: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSR 180
           KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNV TAFELVIKEIYNNVSR
Sbjct: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSR 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 215

[Close]

BLAST of Carg05072 vs. NCBI nr
Match: XP_023549172.1 (ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396.7 bits (1018), Expect = 4.9e-107
Identity = 200/215 (93.02%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGK 60
           MA+D+DQGGE+YL+KIVLIGDSAVGKSNLLSRFARNEFD NSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           E+KAQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDSVKRWLDELGVHCDTAT+
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSR 180
           +MLVGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFELVIKEIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELVIKEIYNNVSR 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 215

[Close]

BLAST of Carg05072 vs. NCBI nr
Match: XP_004149322.1 (PREDICTED: ras-related protein RABA5e [Cucumis sativus] >KGN44658.1 RAB11G [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 6.4e-107
Identity = 201/215 (93.49%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGK 60
           MA+++DQGGEEYL+KIVLIGDSAVGKSNLLSRFARNEFD NSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           EVKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RRTTFDS KRWLDELGVHCDTATV
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSR 180
           +MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVI+EIYNNVS 
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSX 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
            VLNSDSYKAELS NRVSLADG ASSKKGFSCCSQ
Sbjct: 181 XVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

[Close]

BLAST of Carg05072 vs. NCBI nr
Match: XP_022953267.1 (ras-related protein RABA5b-like [Cucurbita moschata])

HSP 1 Score: 390.2 bits (1001), Expect = 4.6e-105
Identity = 196/215 (91.16%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGK 60
           MA+DEDQGGE+YL+KIVLIGDSAVGKSNLLSRFARNEFD NSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADEDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           E+KAQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDSVKRWLDELGVHCDTAT+
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSR 180
           +MLVGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNVRTAFELV++EIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           K LNSDS+KAELSVNRVSLAD  ASSKKGFSCCSQ
Sbjct: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215

[Close]

BLAST of Carg05072 vs. TAIR10
Match: AT3G07410.1 (RAB GTPase homolog A5B)

HSP 1 Score: 339.7 bits (870), Expect = 1.3e-93
Identity = 175/214 (81.78%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA 64
           ED  GEEYL+KIVLIGDSAVGKSNLLSRF+R+EFDTNSKATIGVEFQTQ+VEI+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGAFGALIVYDI+R  TF+SVKRWL EL  HCDTA  +MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKVLN 184
           GNKCDLE+IR VSVEEGK LAEEEGLFFMETSALD+TNV  AFE+VI+EI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDSYKAELSVNRVSLA---DGAASSKKGFSCCSQ 216
           SD+YKAELSVNRVSL    DG+ SS +  SCCS+
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Carg05072 vs. TAIR10
Match: AT1G05810.1 (RAB GTPase homolog A5E)

HSP 1 Score: 332.0 bits (850), Expect = 2.7e-91
Identity = 169/215 (78.60%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEV 62
           S +D+G EEYL+KIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKEV
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+RRTTF+SV RWLDEL +H DT   +M
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKV 182
           LVGNKCDLENIR VSVEEGK LAEEEGLFF+ETSALDSTNV+TAFE+VI +IYNNVSRK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDSYKAELSVNRVSLA---DGAASSKKGFSCCS 215
           LNSD+YK EL+VNRVSL    + A+    GFSCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 259

[Close]

BLAST of Carg05072 vs. TAIR10
Match: AT2G43130.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 328.6 bits (841), Expect = 3.0e-90
Identity = 164/213 (77.00%), Postives = 187/213 (87.79%), Query Frame = 0


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEV 62
           SD+D+ GEEYL+KIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R +TF++V RWLDEL  H DT   KM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKV 182
           L+GNKCDLE+IR VSVEEGK+LAE EGLFFMETSALDSTNV+TAFE+VI+EIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           LNSDSYK EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of Carg05072 vs. TAIR10
Match: AT2G31680.1 (RAB GTPase homolog A5D)

HSP 1 Score: 321.6 bits (823), Expect = 3.6e-88
Identity = 167/216 (77.31%), Postives = 191/216 (88.43%), Query Frame = 0


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEV 62
           S +D+GGEEYL+KIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR+TF+SV RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKV 182
           LVGNKCDLE+IR VSVEEGK LAE EGLFFMETSALDSTNV+TAFE+VI++IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSYKAELSV-NRVSLA--DGAASSKK-GFSCCS 215
           LNSD+YK ELS+ NRVSL   D  +S++  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Carg05072 vs. TAIR10
Match: AT5G47520.1 (RAB GTPase homolog A5A)

HSP 1 Score: 266.2 bits (679), Expect = 1.8e-71
Identity = 144/216 (66.67%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA 64
           ED   E+YL+KIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKE+KA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR TF S+ RWL+EL  H D   V +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKVLN 184
           GNK DL+++R+VS  EGK LAE +GLFFMETSALDS+NV  AFE V+KEIYN +SRKV++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SDSYK----AELSVNR--VSLADGAASSKKGFSCCS 215
           S        A LS  +  V  +DG    KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of Carg05072 vs. Swiss-Prot
Match: sp|Q9SRS5|RAA5B_ARATH (Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.3e-92
Identity = 175/214 (81.78%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA 64
           ED  GEEYL+KIVLIGDSAVGKSNLLSRF+R+EFDTNSKATIGVEFQTQ+VEI+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGAFGALIVYDI+R  TF+SVKRWL EL  HCDTA  +MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKVLN 184
           GNKCDLE+IR VSVEEGK LAEEEGLFFMETSALD+TNV  AFE+VI+EI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDSYKAELSVNRVSLA---DGAASSKKGFSCCSQ 216
           SD+YKAELSVNRVSL    DG+ SS +  SCCS+
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Carg05072 vs. Swiss-Prot
Match: sp|P19892|RAA5E_ARATH (Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 4.8e-90
Identity = 169/215 (78.60%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEV 62
           S +D+G EEYL+KIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKEV
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+RRTTF+SV RWLDEL +H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKV 182
           LVGNKCDLENIR VSVEEGK LAEEEGLFF+ETSALDSTNV+TAFE+VI +IYNNVSRK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDSYKAELSVNRVSLA---DGAASSKKGFSCCS 215
           LNSD+YK EL+VNRVSL    + A+    GFSCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 216

[Close]

BLAST of Carg05072 vs. Swiss-Prot
Match: sp|P28187|RAA5C_ARATH (Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 5.3e-89
Identity = 164/213 (77.00%), Postives = 187/213 (87.79%), Query Frame = 0


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEV 62
           SD+D+ GEEYL+KIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R +TF++V RWLDEL  H DT   KM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKV 182
           L+GNKCDLE+IR VSVEEGK+LAE EGLFFMETSALDSTNV+TAFE+VI+EIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           LNSDSYK EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of Carg05072 vs. Swiss-Prot
Match: sp|Q9SIP0|RAA5D_ARATH (Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 6.5e-87
Identity = 167/216 (77.31%), Postives = 191/216 (88.43%), Query Frame = 0


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEV 62
           S +D+GGEEYL+KIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR+TF+SV RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKV 182
           LVGNKCDLE+IR VSVEEGK LAE EGLFFMETSALDSTNV+TAFE+VI++IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSYKAELSV-NRVSLA--DGAASSKK-GFSCCS 215
           LNSD+YK ELS+ NRVSL   D  +S++  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Carg05072 vs. Swiss-Prot
Match: sp|Q9FGK5|RAA5A_ARATH (Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.3e-70
Identity = 144/216 (66.67%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA 64
           ED   E+YL+KIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKE+KA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR TF S+ RWL+EL  H D   V +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKVLN 184
           GNK DL+++R+VS  EGK LAE +GLFFMETSALDS+NV  AFE V+KEIYN +SRKV++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SDSYK----AELSVNR--VSLADGAASSKKGFSCCS 215
           S        A LS  +  V  +DG    KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of Carg05072 vs. TrEMBL
Match: tr|A0A0A0K5A2|A0A0A0K5A2_CUCSA (RAB11G OS=Cucumis sativus OX=3659 GN=Csa_7G368110 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 4.2e-107
Identity = 201/215 (93.49%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGK 60
           MA+++DQGGEEYL+KIVLIGDSAVGKSNLLSRFARNEFD NSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           EVKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RRTTFDS KRWLDELGVHCDTATV
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSR 180
           +MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVI+EIYNNVS 
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSX 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
            VLNSDSYKAELS NRVSLADG ASSKKGFSCCSQ
Sbjct: 181 XVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

[Close]

BLAST of Carg05072 vs. TrEMBL
Match: tr|A0A2I4F7M7|A0A2I4F7M7_9ROSI (ras-related protein RABA5b-like OS=Juglans regia OX=51240 GN=LOC108996293 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.2e-99
Identity = 186/211 (88.15%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA 64
           E++ GEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA
Sbjct: 4   ENEVGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDISRRTTFDSVKRWLDEL  HCDT T +MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVKRWLDELSTHCDTTTARMLV 123

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKVLN 184
           GNKCDLENIRDVSVEEGK+LAE EGLFFMETSALD+TNV+TAFE+VI+EIY N+SRKVLN
Sbjct: 124 GNKCDLENIRDVSVEEGKSLAEAEGLFFMETSALDATNVQTAFEIVIREIYINISRKVLN 183

Query: 185 SDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           S+SYKAELSVNRVSL +GA SSK+ FSCC++
Sbjct: 184 SESYKAELSVNRVSLVNGAGSSKQSFSCCAK 214

[Close]

BLAST of Carg05072 vs. TrEMBL
Match: tr|A0A061DLV5|A0A061DLV5_THECC (RAB GTPase A5B OS=Theobroma cacao OX=3641 GN=TCM_002700 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 8.0e-98
Identity = 184/213 (86.38%), Postives = 201/213 (94.37%), Query Frame = 0


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVK 63
           +E++ GEEYL+KIVLIGDSAVGKSNLLSRFARNEFD NSKATIGVEFQTQVVEIDGKEVK
Sbjct: 5   EEEERGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDS+KRWLDEL  HCDT   +ML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELSTHCDTTMARML 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEEGLFFMETSALDSTNV+TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NSD+YKAELSVNRV+L  DGA SSK+GFSCC++
Sbjct: 185 NSDAYKAELSVNRVTLVKDGANSSKEGFSCCAR 217

[Close]

BLAST of Carg05072 vs. TrEMBL
Match: tr|A0A2I4GJS4|A0A2I4GJS4_9ROSI (ras-related protein RABA5b-like OS=Juglans regia OX=51240 GN=LOC109008497 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.0e-97
Identity = 182/210 (86.67%), Postives = 199/210 (94.76%), Query Frame = 0


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA 64
           E++ GEEYL+KIVL+GDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA
Sbjct: 4   EEEVGEEYLFKIVLVGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGA GALIVYDISRRTTFDSVKRWLDEL  HCDT   +MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVKRWLDELSTHCDTTMGRMLV 123

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKVLN 184
           GNKCDLENIR+VSVEEGK+LAE EGLFFMETSALD+TNV+TAFE+VI+EIYNN+SRKVLN
Sbjct: 124 GNKCDLENIREVSVEEGKSLAEAEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVLN 183

Query: 185 SDSYKAELSVNRVSLADGAASSKKGFSCCS 215
           S+SYKAELSVNRVSL +G+ SSK+ FSCC+
Sbjct: 184 SESYKAELSVNRVSLVNGSGSSKRSFSCCA 213

[Close]

BLAST of Carg05072 vs. TrEMBL
Match: tr|A0A1U8P6G2|A0A1U8P6G2_GOSHI (ras-related protein RABA5b-like OS=Gossypium hirsutum OX=3635 GN=LOC107954694 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 7.5e-96
Identity = 178/213 (83.57%), Postives = 201/213 (94.37%), Query Frame = 0


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGKEVK 63
           +E++GGEEYL+KIVLIGDSAVGKSNLLSRFARNEFD NSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   EEEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RR++FDS+KRWLDEL  HCDT   +M+
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSIKRWLDELSTHCDTTVARMV 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEE LFFMETSAL+STNV+TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEDLFFMETSALESTNVQTAFEVVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NS++YKAELSVNRV+L  DGA +SK+GFSCC++
Sbjct: 185 NSEAYKAELSVNRVTLVKDGANTSKEGFSCCAR 217

The following BLAST results are available for this feature:

BLAST of Carg05072 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959843.1	4.1e-114	100.00	ras-related protein RABA5b-like [Cucurbita moschata] >XP_023514429.1 ras-related...	[more]
XP_023004189.1	1.3e-112	99.07	ras-related protein RABA5b-like [Cucurbita maxima]	[more]
XP_023549172.1	4.9e-107	93.02	ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo]	[more]
XP_004149322.1	6.4e-107	93.49	PREDICTED: ras-related protein RABA5e [Cucumis sativus] >KGN44658.1 RAB11G [Cucu...	[more]
XP_022953267.1	4.6e-105	91.16	ras-related protein RABA5b-like [Cucurbita moschata]	[more]

BLAST of Carg05072 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07410.1	1.3e-93	81.78	RAB GTPase homolog A5B	[more]
AT1G05810.1	2.7e-91	78.60	RAB GTPase homolog A5E	[more]
AT2G43130.1	3.0e-90	77.00	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G31680.1	3.6e-88	77.31	RAB GTPase homolog A5D	[more]
AT5G47520.1	1.8e-71	66.67	RAB GTPase homolog A5A	[more]

BLAST of Carg05072 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SRS5\|RAA5B_ARATH	2.3e-92	81.78	Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1	[more]
sp\|P19892\|RAA5E_ARATH	4.8e-90	78.60	Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1	[more]
sp\|P28187\|RAA5C_ARATH	5.3e-89	77.00	Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1	[more]
sp\|Q9SIP0\|RAA5D_ARATH	6.5e-87	77.31	Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1	[more]
sp\|Q9FGK5\|RAA5A_ARATH	3.3e-70	66.67	Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1	[more]

BLAST of Carg05072 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5A2\|A0A0A0K5A2_CUCSA	4.2e-107	93.49	RAB11G OS=Cucumis sativus OX=3659 GN=Csa_7G368110 PE=4 SV=1	[more]
tr\|A0A2I4F7M7\|A0A2I4F7M7_9ROSI	4.2e-99	88.15	ras-related protein RABA5b-like OS=Juglans regia OX=51240 GN=LOC108996293 PE=4 S...	[more]
tr\|A0A061DLV5\|A0A061DLV5_THECC	8.0e-98	86.38	RAB GTPase A5B OS=Theobroma cacao OX=3641 GN=TCM_002700 PE=4 SV=1	[more]
tr\|A0A2I4GJS4\|A0A2I4GJS4_9ROSI	1.0e-97	86.67	ras-related protein RABA5b-like OS=Juglans regia OX=51240 GN=LOC109008497 PE=4 S...	[more]
tr\|A0A1U8P6G2\|A0A1U8P6G2_GOSHI	7.5e-96	83.57	ras-related protein RABA5b-like OS=Gossypium hirsutum OX=3635 GN=LOC107954694 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05072-RA	Carg05072-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 56.55 coord: 14..35 score: 51.54 coord: 37..53 score: 33.81 coord: 117..130 score: 49.74 coord: 152..174 score: 40.55
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 e-value: 5.6E-5 score: 21.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 1.3E-29 score: 114.4
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..177 e-value: 1.4E-13 score: 53.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.1E-100 score: 350.5
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 8..213 e-value: 3.4E-65 score: 221.1
None	No IPR available	PANTHER	PTHR24073:SF884	RAS-RELATED PROTEIN RABA5B	coord: 4..214
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 4..214
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..213 score: 34.035
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 8.39877E-106 score: 303.712
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 e-value: 9.4E-61 score: 204.0
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 5.3E-37 score: 125.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..184

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05072	Cla014899	Watermelon (97103) v1	carwmB0079
Carg05072	Csa7G368110	Cucumber (Chinese Long) v2	carcuB0095
Carg05072	MELO3C021114	Melon (DHL92) v3.5.1	carmeB0083
Carg05072	ClCG09G008440	Watermelon (Charleston Gray)	carwcgB0080
Carg05072	CSPI07G14840	Wild cucumber (PI 183967)	carcpiB0099
Carg05072	Cucsa.387790	Cucumber (Gy14) v1	carcgyB0104
Carg05072	CmaCh08G002510	Cucurbita maxima (Rimu)	carcmaB0112
Carg05072	CmaCh17G012950	Cucurbita maxima (Rimu)	carcmaB0104
Carg05072	CmoCh08G002490	Cucurbita moschata (Rifu)	carcmoB0119
Carg05072	CmoCh17G012680	Cucurbita moschata (Rifu)	carcmoB0112
Carg05072	Cp4.1LG12g10780	Cucurbita pepo (Zucchini)	carcpeB0116
Carg05072	Cp4.1LG17g11320	Cucurbita pepo (Zucchini)	carcpeB0125
Carg05072	CsGy7G013370	Cucumber (Gy14) v2	carcgybB0095
Carg05072	MELO3C021114.2	Melon (DHL92) v3.6.1	carmedB0084
Carg05072	CsaV3_7G026630	Cucumber (Chinese Long) v3	carcucB0102
Carg05072	Cla97C09G171190	Watermelon (97103) v2	carwmbB0085
Carg05072	Bhi09G001051	Wax gourd	carwgoB0098

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05072	Carg11477	Silver-seed gourd	carcarB009

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05072	Bottle gourd (USVL1VR-Ls)	carlsiB074
Carg05072	Cucurbita pepo (Zucchini)	carcpeB0123