Carg11477 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11477
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein like
Location	Cucurbita_argyrosperma_scaffold_083 : 115704 .. 117809 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCATCAAACACAGAATCAAATGTGGTTGGGTCCCAATTCAAGCACCGAAATCTTGAAATTCATGAATTCCCCGATAATCATGGCGTCTTTCTGTACTTCCTGTCATGAGTTTGGAGTTTTAGCAATTACCATCATCCGTTTCGCACAGTACAAAAACCTCAACTCTAAGTTTTTCCTTCTTCATCTTCATCCATGGCGGCCGACGACGACCAGGGCGGCGAGGACTACTTGTTTAAGATTGTTCTGATTGGCGACTCTGCGGTGGGGAAATCGAACCTCCTCTCGCGGTTCGCTCGGAATGAGTTCGATAACAATTCCAAGGCCACGATCGGCGTCGAGTTTCAGACGCAAGTGGTGGAAATCGACGGCAAGGAGATCAAGGCTCAGATCTGGGACACCGCCGGCCAGGAGCGCTTTAGAGCTGTCACTTCAGCTTACTATCGCGGCGCCGTTGGCGCCCTTATTGTCTACGATATTAGCCGCCGGAGTAGCTTCAACAGCGTCAAGCGGTGGCTCGACGAGCTCGGCGGTACGTTCTCTCGAATCTGCATGGTTGCTTTACTTTCTGTTTGTTTGCAGAAGCAATTTATGGAATTGAATCGAATTTCTTTCTTCGGTTCATTAGAATCTGCTGTTAGTTTGGTTTATTGATTCTTTGATTTGCGTAGAACTGTAAGAAACATGGAAATGATAGAAAATCCACTGTTCTTGGTTATTCTACTGCTTCTTGTAGGAAAGCTGGATTAGATTAGATCAAAACGATGAACCAGTTGCTTTTGATCTTACTTACTGGAGTTACTTCAGTGAGTAATTTGTTATAAACTAAAGAATTGAATAGTGGTGAGGATTCCCAAATTCATACCAAAAAATAACAGTTTAGCCCTGTGTAATGTTTGAAAACAGATTCAAAAAGAAAAGGCAAGGACCTTGTTTCTCATCTCATAAGTCACTTCTAGTCAACTTTAGGACAAACTTCCTTGTTCTTCGGGCATTTGATGACGATGAAATTTGAACTTCAGTTTATGGCATGTGAAGTTATTAAAGAATAGCTGCTTAGTCTGTATAGGTCTATCATTGGAAGTGACAAGGTTTAGTCACTGTTGAATCAATGACCCAAGAACTTTTTCTTCAAATTTTGAATGGTATGCTTTTGGGGTTATCGACAATATCTGTTAGCAGTGGGCTTGGACTGTTACCGATGGTATTAAAGCCAGACATCGGGCGATGTGCCAGCGAGAAGACTGAGCCCTGAAGGGGGTGGATACGTAGTAGTGTGCTAGCAAGGACGCTGGCCTTGAAGGAGGTGGATTGGAGAGTCCCACATCGATTGGAAAAGAAAACAAGTGCCAGCAAGGACGCTGGGCCCTGAAGAGGGGTGGATTGTGAGATCCCACATCGATTGGGGAGGAGAACGAAACATTGTTTATAAGGGTGTGAAAACTTCTTGTTTAAAAACTTTGAGGGAAAGTTCAGAGAGGACAATATTTGCTAGCGTTGAACTCTTATTCTTAGTTGAACAGAAAGAATTGACGAATGATATACTTTTTTAGTCTCTTCATATCTTCACGTCGATATAATATTGTCCGCTCGCATGATTTCTCTTTACTTTGTGTGGGCTACACTTACTTAGGTATCTAGATAGGTAAATAAAGCAAGCAAATCTCATACTTGATTGTCATTTGCAATTTATAAGATTATGAACTGAAGAAGCTTACTCTCCTGTTACCGTTTGCAGTTCATTGTGATACGGCAACGATAAGAATGTTAGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGCATGTTGGGGAAGGCAAGTATCTAGCAGAAGAGGAAGGACTGTTCTTCATGGAAACCTCTGCTCTTGATTCCACCAATGTCAGAACAGCCTTTGAGCTTGTTGTTAGGGAGATTTACAACAATGTCAGCAGGAAAGCCCTCAACTCTGATTCTCACAAGGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCCGATGCGGGAGCCTCGTCCAAAAAAGGCTTCTCGTGTTGCTCTCAATGAGGTTCATGTTCTCCTTCCCAAATTTTTAGCTTAGAGAACTGTATTCGATAAGTCTAA

mRNA sequence

ATTTCATCAAACACAGAATCAAATGTGGTTGGGTCCCAATTCAAGCACCGAAATCTTGAAATTCATGAATTCCCCGATAATCATGGCGTCTTTCTGTACTTCCTGTCATGAGTTTGGAGTTTTAGCAATTACCATCATCCGTTTCGCACAGTACAAAAACCTCAACTCTAAGTTTTTCCTTCTTCATCTTCATCCATGGCGGCCGACGACGACCAGGGCGGCGAGGACTACTTGTTTAAGATTGTTCTGATTGGCGACTCTGCGGTGGGGAAATCGAACCTCCTCTCGCGGTTCGCTCGGAATGAGTTCGATAACAATTCCAAGGCCACGATCGGCGTCGAGTTTCAGACGCAAGTGGTGGAAATCGACGGCAAGGAGATCAAGGCTCAGATCTGGGACACCGCCGGCCAGGAGCGCTTTAGAGCTGTCACTTCAGCTTACTATCGCGGCGCCGTTGGCGCCCTTATTGTCTACGATATTAGCCGCCGGAGTAGCTTCAACAGCGTCAAGCGGTGGCTCGACGAGCTCGGCGTTCATTGTGATACGGCAACGATAAGAATGTTAGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGCATGTTGGGGAAGGCAAGTATCTAGCAGAAGAGGAAGGACTGTTCTTCATGGAAACCTCTGCTCTTGATTCCACCAATGTCAGAACAGCCTTTGAGCTTGTTGTTAGGGAGATTTACAACAATGTCAGCAGGAAAGCCCTCAACTCTGATTCTCACAAGGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCCGATGCGGGAGCCTCGTCCAAAAAAGGCTTCTCGTGTTGCTCTCAATGAGGTTCATGTTCTCCTTCCCAAATTTTTAGCTTAGAGAACTGTATTCGATAAGTCTAA

Coding sequence (CDS)

ATGGCGGCCGACGACGACCAGGGCGGCGAGGACTACTTGTTTAAGATTGTTCTGATTGGCGACTCTGCGGTGGGGAAATCGAACCTCCTCTCGCGGTTCGCTCGGAATGAGTTCGATAACAATTCCAAGGCCACGATCGGCGTCGAGTTTCAGACGCAAGTGGTGGAAATCGACGGCAAGGAGATCAAGGCTCAGATCTGGGACACCGCCGGCCAGGAGCGCTTTAGAGCTGTCACTTCAGCTTACTATCGCGGCGCCGTTGGCGCCCTTATTGTCTACGATATTAGCCGCCGGAGTAGCTTCAACAGCGTCAAGCGGTGGCTCGACGAGCTCGGCGTTCATTGTGATACGGCAACGATAAGAATGTTAGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGCATGTTGGGGAAGGCAAGTATCTAGCAGAAGAGGAAGGACTGTTCTTCATGGAAACCTCTGCTCTTGATTCCACCAATGTCAGAACAGCCTTTGAGCTTGTTGTTAGGGAGATTTACAACAATGTCAGCAGGAAAGCCCTCAACTCTGATTCTCACAAGGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCCGATGCGGGAGCCTCGTCCAAAAAAGGCTTCTCGTGTTGCTCTCAATGA

Protein sequence

MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ

Homology

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BLAST of Carg11477 vs. NCBI nr
Match: XP_022953267.1 (ras-related protein RABA5b-like [Cucurbita moschata])

HSP 1 Score: 420.2 bits (1079), Expect = 4.1e-114
Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAAD+DQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADEDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSF+SVKRWLDELGVHCDTATI
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ
Sbjct: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215

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BLAST of Carg11477 vs. NCBI nr
Match: XP_022991984.1 (ras-related protein RABA5e-like [Cucurbita maxima])

HSP 1 Score: 417.9 bits (1073), Expect = 2.0e-113
Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+SF+SVKRWLDELG HCDTATI
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTSFDSVKRWLDELGGHCDTATI 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ
Sbjct: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215

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BLAST of Carg11477 vs. NCBI nr
Match: XP_023549172.1 (ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.4 bits (1056), Expect = 1.9e-111
Identity = 207/215 (96.28%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSF+SVKRWLDELGVHCDTATI
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNV+TAFELV++EIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELVIKEIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           K LNSDS+KAELSVNRVSLAD  ASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 215

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BLAST of Carg11477 vs. NCBI nr
Match: XP_004149322.1 (PREDICTED: ras-related protein RABA5e [Cucumis sativus] >KGN44658.1 RAB11G [Cucumis sativus])

HSP 1 Score: 389.8 bits (1000), Expect = 6.0e-105
Identity = 196/215 (91.16%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAA+DDQGGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+RR++F+S KRWLDELGVHCDTAT+
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180
           RMLVGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNVRTAFELV+REIYNNVS 
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSX 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
             LNSDS+KAELS NRVSLAD GASSKKGFSCCSQ
Sbjct: 181 XVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

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BLAST of Carg11477 vs. NCBI nr
Match: XP_022959843.1 (ras-related protein RABA5b-like [Cucurbita moschata] >XP_023514429.1 ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.7 bits (997), Expect = 1.3e-104
Identity = 194/215 (90.23%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MA+D+DQGGE+YL+KIVLIGDSAVGKSNLLSRFARNEFD NSKATIGVEFQTQVVEIDGK
Sbjct: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDTNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++F+SVKRWLDELGVHCDTAT+
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180
           +MLVGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNVRTAFELV++EIYNNVSR
Sbjct: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIKEIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           K LNSDS+KAELSVNRVSLAD  ASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 215

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BLAST of Carg11477 vs. TAIR10
Match: AT1G05810.1 (RAB GTPase homolog A5E)

HSP 1 Score: 324.7 bits (831), Expect = 4.3e-89
Identity = 166/215 (77.21%), Postives = 190/215 (88.37%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+G E+YLFKIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKE+
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR++F SV RWLDEL +H DT   RM
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKA 182
           LVGNKCDLENIR V V EGK LAEEEGLFF+ETSALDSTNV+TAFE+V+ +IYNNVSRK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDSHKAELSVNRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K EL+VNRVSL  D  ++SK+  GFSCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 259

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BLAST of Carg11477 vs. TAIR10
Match: AT3G07410.1 (RAB GTPase homolog A5B)

HSP 1 Score: 324.3 bits (830), Expect = 5.6e-89
Identity = 168/218 (77.06%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           M  +DD+ GE+YLFKIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GK
Sbjct: 1   MGKEDDR-GEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  +F SVKRWL EL  HCDTA  
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVA 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180
           +MLVGNKCDLE+IR V V EGK LAEEEGLFFMETSALD+TNV  AFE+V+REI+NNVSR
Sbjct: 121 QMLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLA---DAGASSKKGFSCCSQ 216
           K LNSD++KAELSVNRVSL    D   SS +  SCCS+
Sbjct: 181 KLLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

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BLAST of Carg11477 vs. TAIR10
Match: AT2G43130.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 321.6 bits (823), Expect = 3.6e-88
Identity = 160/213 (75.12%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           +DDD+ GE+YLFKIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKE+
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R S+F +V RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKA 182
           L+GNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNV+TAFE+V+REIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           LNSDS+K EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of Carg11477 vs. TAIR10
Match: AT2G31680.1 (RAB GTPase homolog A5D)

HSP 1 Score: 318.9 bits (816), Expect = 2.3e-87
Identity = 166/216 (76.85%), Postives = 188/216 (87.04%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+GGE+YLFKIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKE+
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRS+F SV RWLDEL  H DT   RM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKA 182
           LVGNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNV+TAFE+V+R+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSHKAELSV-NRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K ELS+ NRVSL  D   SS +  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Carg11477 vs. TAIR10
Match: AT5G47520.1 (RAB GTPase homolog A5A)

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-70
Identity = 142/216 (65.74%), Postives = 168/216 (77.78%), Query Frame = 0


Query: 5   DDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKA 64
           +D   EDYLFKIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKEIKA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRMLV 124
           QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR +F+S+ RWL+EL  H D   + +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKALN 184
           GNK DL+++R+V   EGK LAE +GLFFMETSALDS+NV  AFE VV+EIYN +SRK ++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SD----SHKAELSVNR--VSLADAGASSKKGFSCCS 215
           S        A LS  +  V  +D     KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of Carg11477 vs. Swiss-Prot
Match: sp|P19892|RAA5E_ARATH (Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 7.7e-88
Identity = 166/215 (77.21%), Postives = 190/215 (88.37%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+G E+YLFKIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKE+
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR++F SV RWLDEL +H DT   RM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKA 182
           LVGNKCDLENIR V V EGK LAEEEGLFF+ETSALDSTNV+TAFE+V+ +IYNNVSRK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDSHKAELSVNRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K EL+VNRVSL  D  ++SK+  GFSCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 216

[Close]

BLAST of Carg11477 vs. Swiss-Prot
Match: sp|Q9SRS5|RAA5B_ARATH (Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-87
Identity = 168/218 (77.06%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           M  +DD+ GE+YLFKIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GK
Sbjct: 1   MGKEDDR-GEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  +F SVKRWL EL  HCDTA  
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVA 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180
           +MLVGNKCDLE+IR V V EGK LAEEEGLFFMETSALD+TNV  AFE+V+REI+NNVSR
Sbjct: 121 QMLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLA---DAGASSKKGFSCCSQ 216
           K LNSD++KAELSVNRVSL    D   SS +  SCCS+
Sbjct: 181 KLLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Carg11477 vs. Swiss-Prot
Match: sp|P28187|RAA5C_ARATH (Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 6.5e-87
Identity = 160/213 (75.12%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           +DDD+ GE+YLFKIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKE+
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R S+F +V RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKA 182
           L+GNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNV+TAFE+V+REIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           LNSDS+K EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of Carg11477 vs. Swiss-Prot
Match: sp|Q9SIP0|RAA5D_ARATH (Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.2e-86
Identity = 166/216 (76.85%), Postives = 188/216 (87.04%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+GGE+YLFKIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKE+
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRS+F SV RWLDEL  H DT   RM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKA 182
           LVGNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNV+TAFE+V+R+IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSHKAELSV-NRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K ELS+ NRVSL  D   SS +  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Carg11477 vs. Swiss-Prot
Match: sp|Q9FGK5|RAA5A_ARATH (Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.1e-69
Identity = 142/216 (65.74%), Postives = 168/216 (77.78%), Query Frame = 0


Query: 5   DDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKA 64
           +D   EDYLFKIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKEIKA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRMLV 124
           QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR +F+S+ RWL+EL  H D   + +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKALN 184
           GNK DL+++R+V   EGK LAE +GLFFMETSALDS+NV  AFE VV+EIYN +SRK ++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SD----SHKAELSVNR--VSLADAGASSKKGFSCCS 215
           S        A LS  +  V  +D     KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of Carg11477 vs. TrEMBL
Match: tr|A0A0A0K5A2|A0A0A0K5A2_CUCSA (RAB11G OS=Cucumis sativus OX=3659 GN=Csa_7G368110 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.9e-105
Identity = 196/215 (91.16%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAA+DDQGGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+RR++F+S KRWLDELGVHCDTAT+
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180
           RMLVGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNVRTAFELV+REIYNNVS 
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSX 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
             LNSDS+KAELS NRVSLAD GASSKKGFSCCSQ
Sbjct: 181 XVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

[Close]

BLAST of Carg11477 vs. TrEMBL
Match: tr|A0A061DLV5|A0A061DLV5_THECC (RAB GTPase A5B OS=Theobroma cacao OX=3641 GN=TCM_002700 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 5.2e-97
Identity = 183/213 (85.92%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           ++++ GE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   EEEERGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSF+S+KRWLDEL  HCDT   RML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELSTHCDTTMARML 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKAL 183
           VGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFE+V+REIYNNVSRKAL
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNVSRKAL 184

Query: 184 NSDSHKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           NSD++KAELSVNRV+L   GA SSK+GFSCC++
Sbjct: 185 NSDAYKAELSVNRVTLVKDGANSSKEGFSCCAR 217

[Close]

BLAST of Carg11477 vs. TrEMBL
Match: tr|A0A1U8P6G2|A0A1U8P6G2_GOSHI (ras-related protein RABA5b-like OS=Gossypium hirsutum OX=3635 GN=LOC107954694 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.8e-95
Identity = 179/213 (84.04%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           ++++GGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK
Sbjct: 5   EEEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+RRSSF+S+KRWLDEL  HCDT   RM+
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSIKRWLDELSTHCDTTVARMV 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKAL 183
           VGNKCDLENIRDV V EGK LAEEE LFFMETSAL+STNV+TAFE+V+REIYNNVSRKAL
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEDLFFMETSALESTNVQTAFEVVIREIYNNVSRKAL 184

Query: 184 NSDSHKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           NS+++KAELSVNRV+L   GA +SK+GFSCC++
Sbjct: 185 NSEAYKAELSVNRVTLVKDGANTSKEGFSCCAR 217

[Close]

BLAST of Carg11477 vs. TrEMBL
Match: tr|A0A0D2VJK7|A0A0D2VJK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_N003900 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.8e-95
Identity = 180/213 (84.51%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           ++++GGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK
Sbjct: 5   EEEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSF+S+KRWLDEL  HCDT   RM+
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELYTHCDTTVARMV 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKAL 183
           VGNKCDLENIRDV V EGK LAEEE LFFMETSAL+STNV+TAFE+V+REIYNNVSRKAL
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEDLFFMETSALESTNVQTAFEVVIREIYNNVSRKAL 184

Query: 184 NSDSHKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           NS+++KAELSVNRV+L   GA +SK+GFSCC++
Sbjct: 185 NSEAYKAELSVNRVTLVKDGANTSKEGFSCCAR 217

[Close]

BLAST of Carg11477 vs. TrEMBL
Match: tr|A0A1R3KTP9|A0A1R3KTP9_9ROSI (Small GTPase superfamily OS=Corchorus olitorius OX=93759 GN=COLO4_04502 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.7e-95
Identity = 181/209 (86.60%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 8   GGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKAQIW 67
           GGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKAQIW
Sbjct: 10  GGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKAQIW 69

Query: 68  DTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATIRMLVGNK 127
           DTAGQERFRAVTSAYYRGAVGALIVYDI+RRSSF+S+KRWL+EL  HCDT   RMLVGNK
Sbjct: 70  DTAGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSIKRWLEELTTHCDTTLARMLVGNK 129

Query: 128 CDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSRKALNSDS 187
           CDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFE+V+REIYNNVSRKALNSD+
Sbjct: 130 CDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNVSRKALNSDA 189

Query: 188 HKAELSVNRVSLADAGA-SSKKGFSCCSQ 216
           +KAELS NRV+L   GA SSK+GF+CC++
Sbjct: 190 YKAELSGNRVTLVKDGANSSKQGFNCCAR 218

The following BLAST results are available for this feature:

BLAST of Carg11477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953267.1	4.1e-114	99.07	ras-related protein RABA5b-like [Cucurbita moschata]	[more]
XP_022991984.1	2.0e-113	98.60	ras-related protein RABA5e-like [Cucurbita maxima]	[more]
XP_023549172.1	1.9e-111	96.28	ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo]	[more]
XP_004149322.1	6.0e-105	91.16	PREDICTED: ras-related protein RABA5e [Cucumis sativus] >KGN44658.1 RAB11G [Cucu...	[more]
XP_022959843.1	1.3e-104	90.23	ras-related protein RABA5b-like [Cucurbita moschata] >XP_023514429.1 ras-related...	[more]

BLAST of Carg11477 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05810.1	4.3e-89	77.21	RAB GTPase homolog A5E	[more]
AT3G07410.1	5.6e-89	77.06	RAB GTPase homolog A5B	[more]
AT2G43130.1	3.6e-88	75.12	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G31680.1	2.3e-87	76.85	RAB GTPase homolog A5D	[more]
AT5G47520.1	1.2e-70	65.74	RAB GTPase homolog A5A	[more]

BLAST of Carg11477 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P19892\|RAA5E_ARATH	7.7e-88	77.21	Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1	[more]
sp\|Q9SRS5\|RAA5B_ARATH	1.0e-87	77.06	Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1	[more]
sp\|P28187\|RAA5C_ARATH	6.5e-87	75.12	Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1	[more]
sp\|Q9SIP0\|RAA5D_ARATH	4.2e-86	76.85	Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1	[more]
sp\|Q9FGK5\|RAA5A_ARATH	2.1e-69	65.74	Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1	[more]

BLAST of Carg11477 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5A2\|A0A0A0K5A2_CUCSA	3.9e-105	91.16	RAB11G OS=Cucumis sativus OX=3659 GN=Csa_7G368110 PE=4 SV=1	[more]
tr\|A0A061DLV5\|A0A061DLV5_THECC	5.2e-97	85.92	RAB GTPase A5B OS=Theobroma cacao OX=3641 GN=TCM_002700 PE=4 SV=1	[more]
tr\|A0A1U8P6G2\|A0A1U8P6G2_GOSHI	2.8e-95	84.04	ras-related protein RABA5b-like OS=Gossypium hirsutum OX=3635 GN=LOC107954694 PE...	[more]
tr\|A0A0D2VJK7\|A0A0D2VJK7_GOSRA	2.8e-95	84.51	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_N003900 PE=4 SV=...	[more]
tr\|A0A1R3KTP9\|A0A1R3KTP9_9ROSI	3.7e-95	86.60	Small GTPase superfamily OS=Corchorus olitorius OX=93759 GN=COLO4_04502 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11477-RA	Carg11477-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 117..130 score: 47.89 coord: 152..174 score: 42.14 coord: 14..35 score: 52.57 coord: 37..53 score: 33.53 coord: 55..77 score: 56.52
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 3.7E-27 score: 106.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.2E-101 score: 353.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 e-value: 2.3E-5 score: 27.0
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..177 e-value: 3.8E-13 score: 48.3
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 8..213 e-value: 2.5E-64 score: 218.3
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 4..214
None	No IPR available	PANTHER	PTHR24073:SF884	RAS-RELATED PROTEIN RABA5B	coord: 4..214
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..213 score: 33.675
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 8.48517E-105 score: 301.401
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 2.2E-36 score: 123.1
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 e-value: 3.5E-60 score: 202.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..183

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11477	Cla014899	Watermelon (97103) v1	carwmB0014
Carg11477	Csa7G368110	Cucumber (Chinese Long) v2	carcuB0013
Carg11477	MELO3C021114	Melon (DHL92) v3.5.1	carmeB0011
Carg11477	ClCG09G008440	Watermelon (Charleston Gray)	carwcgB0012
Carg11477	CSPI07G14840	Wild cucumber (PI 183967)	carcpiB0013
Carg11477	Cucsa.387790	Cucumber (Gy14) v1	carcgyB0013
Carg11477	CmaCh08G002510	Cucurbita maxima (Rimu)	carcmaB0021
Carg11477	CmaCh17G012950	Cucurbita maxima (Rimu)	carcmaB0020
Carg11477	CmoCh08G002490	Cucurbita moschata (Rifu)	carcmoB0022
Carg11477	CmoCh17G012680	Cucurbita moschata (Rifu)	carcmoB0021
Carg11477	Cp4.1LG12g10780	Cucurbita pepo (Zucchini)	carcpeB0018
Carg11477	Cp4.1LG17g11320	Cucurbita pepo (Zucchini)	carcpeB0020
Carg11477	CsGy7G013370	Cucumber (Gy14) v2	carcgybB0012
Carg11477	MELO3C021114.2	Melon (DHL92) v3.6.1	carmedB0012
Carg11477	CsaV3_7G026630	Cucumber (Chinese Long) v3	carcucB0013
Carg11477	Cla97C09G171190	Watermelon (97103) v2	carwmbB0012
Carg11477	Bhi09G001051	Wax gourd	carwgoB0015

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11477	Carg05072	Silver-seed gourd	carcarB009

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11477	Cucurbita pepo (Zucchini)	carcpeB0019
Carg11477	Bottle gourd (USVL1VR-Ls)	carlsiB012