CmaCh08G002510.1 (mRNA) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh08G002510.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RAN GTPase 3
Location	Cma_Chr08 : 1416947 .. 1419931 (+)
Sequence length	1127

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTACCAATGTGAATTCATGAGCATGCTATCAAAGCCAGTTGGGACCCAATTCAAGCGCCAAAAAGTTGATTATATTTACGAATTTCCCGATAATCATGGCGTATTTCAGTGCCTCCTGTCATGAGGTTGTAGTTATAGTCATTACTATCCATTTCGGACCGCACAAAAACCTCCATAGCAAGCTTCTTCATCTTCATCTGCATCAATGGCGAGTGACGAGGACCAGGGCGGTGAGGAGTACTTGTACAAGATTGTCCTTATTGGCGACTCTGCTGTGGGCAAATCGAACCTCCTCTCGCGATTTGCTCGGAATGAGTTCGATAACAACTCCAAGGCTACAATCGGCGTCGAGTTTCAGACTCAAGTGGTGGAAATCGACGGCAAAGAGGTGAAGGCTCAGATCTGGGATACTGCTGGCCAGGAGCGATTTAGGGCTGTCACTTCGGCCTACTATCGCGGCGCTTTTGGTGCGCTGATTGTCTACGATATCAGCCGTCGGACAACCTTCGACAGTGTCAAGCGGTGGCTCGACGAACTCGGCGGTACGTTCTCTTTGAATCTTTTTGGTTGCTTTACTGTTCAGTTTGTTTGCAGAAGCTTTATAGAACTGAATCCAATTTTTGCGTCTGTTTACTAGAATCTGTTGCTGGTTTTGTTTATTGATTCTTTGATTTGTGTAGAACTGTAAGTAAGATATGAATAATGGAAAAATCAGGGTTATTGTTCATTCTTCTTTTGTTGGGGGAAAGCTGGATTAGATTGGTGAAAAAGGTTGAATCATGTGTTCTTTTACTTACTAAAGTTGCTTCAGTGAGTAGTTTTTAATGAACTAAAGGATGAGCAGTGTTGAGTTTTGCCAAATTTACATCTAAGAGAATTGTATATTGTTTAGACCCGTGTACTGGTTGAAATCAGATTCAAAAAGAAAAGCTGTGGAGGGACCTTAAATGTTAGCTCATAAGTCATATTTGATAGATGAACACGACTCTCTAGATATGATATTGTCCACTTAGGTGATGTGGGACTTTCATCATCCAACATCTCCCCTCGAACAAAGTACGCCTCTCTTTAATCGAGGCTCGACTTCTTTTTCTTTTGGAGTCTTAGTCATTTTTTACTATGTCTTCGAGGAGGCTCGATTCCTTTTCTTTTGGAGTCCTTTGTTCGACATTTGAGGATTCACCAATCTATTGGCACGAATGAGTTTAGGGCATGACTTTGATACCATGTTAGATGAACACGACTCTCCACCATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCTCCAAAAGGCCTCACACCAATGGAGAGAGTATTCTTTGATTATATACCCATGATCATTCCCTAAATTAGCGTAGGTGGGACTTTCCTCACAAATTTAGGGCAACTACTTGTCAACCCATTATATTGAAATTTGAACTTCAGTTTGTGGCATTTGAAGGTATTACGGAATAGTTGCTTAGTCGATACAGGCCTATCCTAAGAAGTGACTAGATGTTAGTTACTTATTGTTTTTTTTAGTTCAACCATCACCATACGTTTTGATCTACAATTTATGCCTTACCAAATGAACTTTGCTTTTAGGTTGGTAGGGTTAGTCACCATTGAATCAAGGACCTAATAACTTCTTTTTTCCAAATTTTGAACTGTATGCTTTTCAGGTGATTTATCCTTTCTCATTTGGATATATTTTTTAGTTTCTTTAACAGTCTAAGCCCATTGCTAGCAAATGTTGTATTCTTTGGGTTTTCACACCCTTATAAGGAATGCTTCATTTTCATATGAAAAGTTTCCACACCCTTATAAGGAATGCTTCATTTTCATAGAAGTTTGTACATTTTCTCTTAGCTCCCTTCTCAAAGTTTCAAAGGAAAAGTTTCCACGCCCTTATAAGGAATGCTTCATTTTCATAGGAGAAGTTTCCACACCTTTATAAGGAATGATGCTTCATTTTCATTGGGCATCTTCTCCGAAGTCTGGCTTTGATACCATTTGTAATGGCTAGCCCATTAGCAGATATTGTTTTCTTTGGGCTTTTCCTTCTCGGCTTCCCCTCAAAATTTTTAAATGCATATACTAGGGGGAGAGGTTTCCATGCCCTTATAAGGAATGATTTGTTCTTCTCTCAAACCAAGATGGAATCTCACATGTCCTAAACTAAACTAAAGCTTAATGTTAATAGTGATATTGCTTATACTTGAACATAGTTGTTTCTCTTGCTAGGGTATGGGTTACATTGACATCTTTGTATCTCTAGATAGGTCTATAAAGCAAGCGAGAAACCATCCCTCTGTCAACACGATCTCATACCTTCATTGTGGTTTGCAATTTGTAAGATTATAATAAACTAACGTATCCCTCCCGAAACGATTACAGTTCATTGTGATACCGCGACTGTGAAGATGCTGGTAGGAAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGCAAGAATCTGGCAGAAGAGGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTCATAACAGCCTTTGAGCTTGTCATTAAGGAGATTTACAACAATGTCAGCAGGAAAGTCCTTAACTCTGATTCTTATAAGGCTGAGCTTTCTGTAAATCGAGTAAGCTTGGCTGATGGGGCTGCCTCCTCCAAGAAAGGCTTCTCTTGTTGTTCTCAATGAGTTTCAATTTTTTTTTTTTTCGGGTCAAATTTTAAAAAATATTTAATAGGGCCAAGAGTACTGTTGGACGTATTAAAAGTGAGATTTATTAGATATCAAATGGAAAGCGTTTGAAAATTTAGAAATATATTACACATCTTAAAAGATGTTCACGAGCTAAACTTGAAATTTAACGTTTTTTTGAGTGCCATTGTTTTGTGGTGCTTATGAATACTCAAATGTGGGTATGTTTGGCTACAAAAATTTTAAAAGGATTACATGTTAGAAATCA

mRNA sequence

CGATTACCAATGTGAATTCATGAGCATGCTATCAAAGCCAGTTGGGACCCAATTCAAGCGCCAAAAAGTTGATTATATTTACGAATTTCCCGATAATCATGGCGTATTTCAGTGCCTCCTGTCATGAGGTTGTAGTTATAGTCATTACTATCCATTTCGGACCGCACAAAAACCTCCATAGCAAGCTTCTTCATCTTCATCTGCATCAATGGCGAGTGACGAGGACCAGGGCGGTGAGGAGTACTTGTACAAGATTGTCCTTATTGGCGACTCTGCTGTGGGCAAATCGAACCTCCTCTCGCGATTTGCTCGGAATGAGTTCGATAACAACTCCAAGGCTACAATCGGCGTCGAGTTTCAGACTCAAGTGGTGGAAATCGACGGCAAAGAGGTGAAGGCTCAGATCTGGGATACTGCTGGCCAGGAGCGATTTAGGGCTGTCACTTCGGCCTACTATCGCGGCGCTTTTGGTGCGCTGATTGTCTACGATATCAGCCGTCGGACAACCTTCGACAGTGTCAAGCGGTGGCTCGACGAACTCGGCGTTCATTGTGATACCGCGACTGTGAAGATGCTGGTAGGAAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGCAAGAATCTGGCAGAAGAGGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTCATAACAGCCTTTGAGCTTGTCATTAAGGAGATTTACAACAATGTCAGCAGGAAAGTCCTTAACTCTGATTCTTATAAGGCTGAGCTTTCTGTAAATCGAGTAAGCTTGGCTGATGGGGCTGCCTCCTCCAAGAAAGGCTTCTCTTGTTGTTCTCAATGAGTTTCAATTTTTTTTTTTTTCGGGTCAAATTTTAAAAAATATTTAATAGGGCCAAGAGTACTGTTGGACGTATTAAAAGTGAGATTTATTAGATATCAAATGGAAAGCGTTTGAAAATTTAGAAATATATTACACATCTTAAAAGATGTTCACGAGCTAAACTTGAAATTTAACGTTTTTTTGAGTGCCATTGTTTTGTGGTGCTTATGAATACTCAAATGTGGGTATGTTTGGCTACAAAAATTTTAAAAGGATTACATGTTAGAAATCA

Coding sequence (CDS)

ATGGCGAGTGACGAGGACCAGGGCGGTGAGGAGTACTTGTACAAGATTGTCCTTATTGGCGACTCTGCTGTGGGCAAATCGAACCTCCTCTCGCGATTTGCTCGGAATGAGTTCGATAACAACTCCAAGGCTACAATCGGCGTCGAGTTTCAGACTCAAGTGGTGGAAATCGACGGCAAAGAGGTGAAGGCTCAGATCTGGGATACTGCTGGCCAGGAGCGATTTAGGGCTGTCACTTCGGCCTACTATCGCGGCGCTTTTGGTGCGCTGATTGTCTACGATATCAGCCGTCGGACAACCTTCGACAGTGTCAAGCGGTGGCTCGACGAACTCGGCGTTCATTGTGATACCGCGACTGTGAAGATGCTGGTAGGAAACAAGTGTGATTTGGAGAACATCAGAGATGTGAGTGTGGAGGAAGGCAAGAATCTGGCAGAAGAGGAAGGACTGTTCTTCATGGAGACCTCTGCTCTTGATTCCACCAATGTCATAACAGCCTTTGAGCTTGTCATTAAGGAGATTTACAACAATGTCAGCAGGAAAGTCCTTAACTCTGATTCTTATAAGGCTGAGCTTTCTGTAAATCGAGTAAGCTTGGCTGATGGGGCTGCCTCCTCCAAGAAAGGCTTCTCTTGTTGTTCTCAATGA

Protein sequence

MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ

Homology

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BLAST of CmaCh08G002510.1 vs. Swiss-Prot
Match: RAA5B_ARATH (Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.9e-91
Identity = 174/214 (81.31%), Postives = 192/214 (89.72%), Query Frame = 1


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKA 64
           ED  GEEYL+KIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGAFGALIVYDI+R  TF+SVKRWL EL  HCDTA  +MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLN 184
           GNKCDLE+IR VSVEEGK LAEEEGLFFMETSALD+TNV  AFE+VI+EI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDSYKAELSVNRVSLA---DGAASSKKGFSCCSQ 216
           SD+YKAELSVNRVSL    DG+ SS +  SCCS+
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

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BLAST of CmaCh08G002510.1 vs. Swiss-Prot
Match: RAA5E_ARATH (Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.0e-89
Identity = 169/215 (78.60%), Postives = 188/215 (87.44%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           S +D+G EEYL+KIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKEV
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+RRTTF+SV RWLDEL +H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           LVGNKCDLENIR VSVEEGK LAEEEGLFF+ETSALDSTNV TAFE+VI +IYNNVSRK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDSYKAELSVNRVSLA---DGAASSKKGFSCCS 215
           LNSD+YK EL+VNRVSL    + A+    GFSCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 216

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BLAST of CmaCh08G002510.1 vs. Swiss-Prot
Match: RAA5C_ARATH (Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.4e-88
Identity = 164/213 (77.00%), Postives = 186/213 (87.32%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           SD+D+ GEEYL+KIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R +TF++V RWLDEL  H DT   KM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           L+GNKCDLE+IR VSVEEGK+LAE EGLFFMETSALDSTNV TAFE+VI+EIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           LNSDSYK EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of CmaCh08G002510.1 vs. Swiss-Prot
Match: RAA5D_ARATH (Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 5.4e-86
Identity = 167/216 (77.31%), Postives = 190/216 (87.96%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           S +D+GGEEYL+KIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR+TF+SV RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           LVGNKCDLE+IR VSVEEGK LAE EGLFFMETSALDSTNV TAFE+VI++IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSYKAELSV-NRVSLA--DGAASSKK-GFSCCS 215
           LNSD+YK ELS+ NRVSL   D  +S++  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of CmaCh08G002510.1 vs. Swiss-Prot
Match: RAA5A_ARATH (Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.1e-70
Identity = 144/216 (66.67%), Postives = 169/216 (78.24%), Query Frame = 1


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKA 64
           ED   E+YL+KIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKE+KA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR TF S+ RWL+EL  H D   V +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLN 184
           GNK DL+++R+VS  EGK LAE +GLFFMETSALDS+NV  AFE V+KEIYN +SRKV++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SDSYK----AELSVNR--VSLADGAASSKKGFSCCS 215
           S        A LS  +  V  +DG    KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

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BLAST of CmaCh08G002510.1 vs. TrEMBL
Match: A0A0A0K5A2_CUCSA (RAB11G OS=Cucumis sativus GN=Csa_7G368110 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-108
Identity = 203/215 (94.42%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MA+++DQGGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           EVKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RRTTFDS KRWLDELGVHCDTATV
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSR 180
           +MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNV TAFELVI+EIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSR 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           KVLNSDSYKAELS NRVSLADG ASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

[Close]

BLAST of CmaCh08G002510.1 vs. TrEMBL
Match: A0A061DLV5_THECC (RAB GTPase A5B OS=Theobroma cacao GN=TCM_002700 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-98
Identity = 185/213 (86.85%), Postives = 201/213 (94.37%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E++ GEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK
Sbjct: 5   EEEERGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDS+KRWLDEL  HCDT   +ML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELSTHCDTTMARML 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEEGLFFMETSALDSTNV TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NSD+YKAELSVNRV+L  DGA SSK+GFSCC++
Sbjct: 185 NSDAYKAELSVNRVTLVKDGANSSKEGFSCCAR 217

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BLAST of CmaCh08G002510.1 vs. TrEMBL
Match: A0A0D2VJK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_N003900 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 3.1e-96
Identity = 180/213 (84.51%), Postives = 201/213 (94.37%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E++GGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   EEEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDS+KRWLDEL  HCDT   +M+
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELYTHCDTTVARMV 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEE LFFMETSAL+STNV TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEDLFFMETSALESTNVQTAFEVVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NS++YKAELSVNRV+L  DGA +SK+GFSCC++
Sbjct: 185 NSEAYKAELSVNRVTLVKDGANTSKEGFSCCAR 217

[Close]

BLAST of CmaCh08G002510.1 vs. TrEMBL
Match: A0A0D2NCZ6_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_001G229200 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.6e-95
Identity = 180/215 (83.72%), Postives = 198/215 (92.09%), Query Frame = 1


Query: 2   ASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE 61
           A +E+ GGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQ VEIDGKE
Sbjct: 71  AHEEEAGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQCVEIDGKE 130

Query: 62  VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVK 121
           VKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RR++FDS+KRWLDEL  HCDT   +
Sbjct: 131 VKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSIKRWLDELTTHCDTTLTR 190

Query: 122 MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRK 181
           MLVGNKCDLENIRDVSVEEGK+LAEEEGLFF+ETSAL+STNV TAFE+VI+EIYNNVSRK
Sbjct: 191 MLVGNKCDLENIRDVSVEEGKSLAEEEGLFFLETSALESTNVQTAFEIVIREIYNNVSRK 250

Query: 182 VLNSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
            LNSDSYK ELS N+V+L  DGA +SK GFSCC++
Sbjct: 251 ALNSDSYKGELSGNKVTLVKDGANASKTGFSCCAR 285

[Close]

BLAST of CmaCh08G002510.1 vs. TrEMBL
Match: B9GQQ0_POPTR (GTP-binding family protein OS=Populus trichocarpa GN=POPTR_0002s25100g PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.9e-94
Identity = 176/212 (83.02%), Postives = 198/212 (93.40%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E +GGEEYL+KIV+IGDSAVGKSNLLSRFARNEFD+NSKATIGVEFQTQVV+IDGKE+K
Sbjct: 6   EEGEGGEEYLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIK 65

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RRT+FDSVKRWLDELG HCDTA  +ML
Sbjct: 66  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARML 125

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDL++IR+VS +EGK+LAEEE LFFMETSALDSTNV  AFE+VI+EIYNN+SRK+L
Sbjct: 126 VGNKCDLDSIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKIL 185

Query: 184 NSDSYKAELSVNRVSLADGAASSKK-GFSCCS 215
           NSDSYKAEL+ NRVSL +G  SSKK GFSCC+
Sbjct: 186 NSDSYKAELTANRVSLVNGDTSSKKYGFSCCN 217

[Close]

BLAST of CmaCh08G002510.1 vs. TAIR10
Match: AT3G07410.1 (AT3G07410.1 RAB GTPase homolog A5B)

HSP 1 Score: 336.7 bits (862), Expect = 1.1e-92
Identity = 174/214 (81.31%), Postives = 192/214 (89.72%), Query Frame = 1


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKA 64
           ED  GEEYL+KIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GKEVKA
Sbjct: 4   EDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKA 63

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGAFGALIVYDI+R  TF+SVKRWL EL  HCDTA  +MLV
Sbjct: 64  QIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLV 123

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLN 184
           GNKCDLE+IR VSVEEGK LAEEEGLFFMETSALD+TNV  AFE+VI+EI+NNVSRK+LN
Sbjct: 124 GNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLN 183

Query: 185 SDSYKAELSVNRVSLA---DGAASSKKGFSCCSQ 216
           SD+YKAELSVNRVSL    DG+ SS +  SCCS+
Sbjct: 184 SDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of CmaCh08G002510.1 vs. TAIR10
Match: AT1G05810.1 (AT1G05810.1 RAB GTPase homolog A5E)

HSP 1 Score: 328.9 bits (842), Expect = 2.3e-90
Identity = 169/215 (78.60%), Postives = 188/215 (87.44%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           S +D+G EEYL+KIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKEV
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+RRTTF+SV RWLDEL +H DT   +M
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           LVGNKCDLENIR VSVEEGK LAEEEGLFF+ETSALDSTNV TAFE+VI +IYNNVSRK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDSYKAELSVNRVSLA---DGAASSKKGFSCCS 215
           LNSD+YK EL+VNRVSL    + A+    GFSCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 259

[Close]

BLAST of CmaCh08G002510.1 vs. TAIR10
Match: AT2G43130.1 (AT2G43130.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 325.9 bits (834), Expect = 1.9e-89
Identity = 164/213 (77.00%), Postives = 186/213 (87.32%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           SD+D+ GEEYL+KIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKEV
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R +TF++V RWLDEL  H DT   KM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           L+GNKCDLE+IR VSVEEGK+LAE EGLFFMETSALDSTNV TAFE+VI+EIY+N+SRK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           LNSDSYK EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of CmaCh08G002510.1 vs. TAIR10
Match: AT2G31680.1 (AT2G31680.1 RAB GTPase homolog A5D)

HSP 1 Score: 318.5 bits (815), Expect = 3.1e-87
Identity = 167/216 (77.31%), Postives = 190/216 (87.96%), Query Frame = 1


Query: 3   SDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
           S +D+GGEEYL+KIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKEV
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKM 122
           KAQIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR+TF+SV RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKV 182
           LVGNKCDLE+IR VSVEEGK LAE EGLFFMETSALDSTNV TAFE+VI++IY N+SRK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSYKAELSV-NRVSLA--DGAASSKK-GFSCCS 215
           LNSD+YK ELS+ NRVSL   D  +S++  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of CmaCh08G002510.1 vs. TAIR10
Match: AT5G47520.1 (AT5G47520.1 RAB GTPase homolog A5A)

HSP 1 Score: 265.0 bits (676), Expect = 4.0e-71
Identity = 144/216 (66.67%), Postives = 169/216 (78.24%), Query Frame = 1


Query: 5   EDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKA 64
           ED   E+YL+KIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKE+KA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKMLV 124
           QIWDTAGQERFRAVTSAYYRGA GAL+VYDISRR TF S+ RWL+EL  H D   V +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVLN 184
           GNK DL+++R+VS  EGK LAE +GLFFMETSALDS+NV  AFE V+KEIYN +SRKV++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SDSYK----AELSVNR--VSLADGAASSKKGFSCCS 215
           S        A LS  +  V  +DG    KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of CmaCh08G002510.1 vs. NCBI nr
Match: gi|449463200|ref|XP_004149322.1| (PREDICTED: ras-related protein RABA5e [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 3.0e-108
Identity = 203/215 (94.42%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MA+++DQGGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATV 120
           EVKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RRTTFDS KRWLDELGVHCDTATV
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 KMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSR 180
           +MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNV TAFELVI+EIYNNVSR
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSR 180

Query: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           KVLNSDSYKAELS NRVSLADG ASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

[Close]

BLAST of CmaCh08G002510.1 vs. NCBI nr
Match: gi|659116458|ref|XP_008458081.1| (PREDICTED: ras-related protein RABA5b [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 1.9e-107
Identity = 202/212 (95.28%), Postives = 207/212 (97.64%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           D+DQGGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK
Sbjct: 5   DDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRRTTFDS KRWLDELGVHCDTATV+ML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSAKRWLDELGVHCDTATVRML 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNV TAFELVI+EI+NNVSRKVL
Sbjct: 125 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIFNNVSRKVL 184

Query: 184 NSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 216
           NSDSYKAELS NRVSLADG ASSKKGFSCCSQ
Sbjct: 185 NSDSYKAELSENRVSLADGGASSKKGFSCCSQ 216

[Close]

BLAST of CmaCh08G002510.1 vs. NCBI nr
Match: gi|590713362|ref|XP_007049622.1| (RAB GTPase A5B [Theobroma cacao])

HSP 1 Score: 365.9 bits (938), Expect = 4.7e-98
Identity = 185/213 (86.85%), Postives = 201/213 (94.37%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E++ GEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK
Sbjct: 5   EEEERGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDS+KRWLDEL  HCDT   +ML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELSTHCDTTMARML 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEEGLFFMETSALDSTNV TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NSD+YKAELSVNRV+L  DGA SSK+GFSCC++
Sbjct: 185 NSDAYKAELSVNRVTLVKDGANSSKEGFSCCAR 217

[Close]

BLAST of CmaCh08G002510.1 vs. NCBI nr
Match: gi|823266802|ref|XP_012466092.1| (PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii])

HSP 1 Score: 359.4 bits (921), Expect = 4.4e-96
Identity = 180/213 (84.51%), Postives = 201/213 (94.37%), Query Frame = 1


Query: 4   DEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 63
           +E++GGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   EEEEGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVKML 123
           AQIWDTAGQERFRAVTSAYYRGA GALIVYDISRR++FDS+KRWLDEL  HCDT   +M+
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSIKRWLDELYTHCDTTVARMV 124

Query: 124 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRKVL 183
           VGNKCDLENIRDVSVEEGK+LAEEE LFFMETSAL+STNV TAFE+VI+EIYNNVSRK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKSLAEEEDLFFMETSALESTNVQTAFEVVIREIYNNVSRKAL 184

Query: 184 NSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
           NS++YKAELSVNRV+L  DGA +SK+GFSCC++
Sbjct: 185 NSEAYKAELSVNRVTLVKDGANTSKEGFSCCAR 217

[Close]

BLAST of CmaCh08G002510.1 vs. NCBI nr
Match: gi|823127027|ref|XP_012492242.1| (PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii])

HSP 1 Score: 356.3 bits (913), Expect = 3.8e-95
Identity = 180/215 (83.72%), Postives = 198/215 (92.09%), Query Frame = 1


Query: 2   ASDEDQGGEEYLYKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE 61
           A +E+ GGEEYL+KIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQ VEIDGKE
Sbjct: 3   AHEEEAGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQCVEIDGKE 62

Query: 62  VKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDISRRTTFDSVKRWLDELGVHCDTATVK 121
           VKAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+RR++FDS+KRWLDEL  HCDT   +
Sbjct: 63  VKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRSSFDSIKRWLDELTTHCDTTLTR 122

Query: 122 MLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVITAFELVIKEIYNNVSRK 181
           MLVGNKCDLENIRDVSVEEGK+LAEEEGLFF+ETSAL+STNV TAFE+VI+EIYNNVSRK
Sbjct: 123 MLVGNKCDLENIRDVSVEEGKSLAEEEGLFFLETSALESTNVQTAFEIVIREIYNNVSRK 182

Query: 182 VLNSDSYKAELSVNRVSLA-DGAASSKKGFSCCSQ 216
            LNSDSYK ELS N+V+L  DGA +SK GFSCC++
Sbjct: 183 ALNSDSYKGELSGNKVTLVKDGANASKTGFSCCAR 217

The following BLAST results are available for this feature:

BLAST of CmaCh08G002510.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA5B_ARATH	1.9e-91	81.31	Ras-related protein RABA5b OS=Arabidopsis thaliana GN=RABA5B PE=2 SV=1	[more]
RAA5E_ARATH	4.0e-89	78.60	Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2 SV=1	[more]
RAA5C_ARATH	3.4e-88	77.00	Ras-related protein RABA5c OS=Arabidopsis thaliana GN=RABA5C PE=1 SV=1	[more]
RAA5D_ARATH	5.4e-86	77.31	Ras-related protein RABA5d OS=Arabidopsis thaliana GN=RABA5D PE=1 SV=1	[more]
RAA5A_ARATH	7.1e-70	66.67	Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2 SV=1	[more]

BLAST of CmaCh08G002510.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5A2_CUCSA	2.1e-108	94.42	RAB11G OS=Cucumis sativus GN=Csa_7G368110 PE=4 SV=1	[more]
A0A061DLV5_THECC	3.3e-98	86.85	RAB GTPase A5B OS=Theobroma cacao GN=TCM_002700 PE=4 SV=1	[more]
A0A0D2VJK7_GOSRA	3.1e-96	84.51	Uncharacterized protein OS=Gossypium raimondii GN=B456_N003900 PE=4 SV=1	[more]
A0A0D2NCZ6_GOSRA	2.6e-95	83.72	Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_001G229200 PE=...	[more]
B9GQQ0_POPTR	4.9e-94	83.02	GTP-binding family protein OS=Populus trichocarpa GN=POPTR_0002s25100g PE=4 SV=1	[more]

BLAST of CmaCh08G002510.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07410.1	1.1e-92	81.31	RAB GTPase homolog A5B	[more]
AT1G05810.1	2.3e-90	78.60	RAB GTPase homolog A5E	[more]
AT2G43130.1	1.9e-89	77.00	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT2G31680.1	3.1e-87	77.31	RAB GTPase homolog A5D	[more]
AT5G47520.1	4.0e-71	66.67	RAB GTPase homolog A5A	[more]

BLAST of CmaCh08G002510.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463200\|ref\|XP_004149322.1\|	3.0e-108	94.42	PREDICTED: ras-related protein RABA5e [Cucumis sativus]	[more]
gi\|659116458\|ref\|XP_008458081.1\|	1.9e-107	95.28	PREDICTED: ras-related protein RABA5b [Cucumis melo]	[more]
gi\|590713362\|ref\|XP_007049622.1\|	4.7e-98	86.85	RAB GTPase A5B [Theobroma cacao]	[more]
gi\|823266802\|ref\|XP_012466092.1\|	4.4e-96	84.51	PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii]	[more]
gi\|823127027\|ref\|XP_012492242.1\|	3.8e-95	83.72	PREDICTED: ras-related protein RABA5e-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0010014	meristem initiation
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0010075	regulation of meristem growth
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh08G002510	CmaCh08G002510	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh08G002510.1	CmaCh08G002510.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G002510.1.exon.2	CmaCh08G002510.1.exon.2	exon
CmaCh08G002510.1.exon.1	CmaCh08G002510.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G002510.1.five_prime_UTR.1	CmaCh08G002510.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G002510.1.CDS.1	CmaCh08G002510.1.CDS.1	CDS
CmaCh08G002510.1.CDS.2	CmaCh08G002510.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh08G002510.1.three_prime_UTR.1	CmaCh08G002510.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 score: 2.8
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..170 score: 1.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..213 score: 6.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..184 score: 1.78
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 2.6E-39coord: 14..35 score: 2.6E-39coord: 117..130 score: 2.6E-39coord: 152..174 score: 2.6E-39coord: 37..53 score: 2.6
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 6..215 score: 4.0E
None	No IPR available	PANTHER	PTHR24073:SF583	SUBFAMILY NOT NAMED	coord: 6..215 score: 4.0E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 score: 6.8
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..177 score: 6.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 score: 1.3E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 score: 6.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..213 score: 33