Cucsa.334870 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCCTCCATAATAAAATCAACCAAATTCAAAGGCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACaCCAAAAAAACCGTAAATCGAAAACCCCCGGAAAAACCCACCACCTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACA ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCCTCCATAATAAAATCAACCAAATTCAAAGGCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACACCAAAAAAACCGTAAATCGAAAACCCCCGGAAAAACCCACCACCTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACA ATGGAAATTGACTTCCAGTCGCCGGAGATCCACCGCGGAGCCACCGCCTCCATAATAAAATCAACCAAATTCAAAGGCAGAAACAGAAGTAACAATAATGGCAACAAGTTCGTCGGAGTCCGGCAACGGCCGTCCGGCAGATGGGTAGCGGAAATCAAAGACACAACGAAGAAAATTCGAATGTGGCTCGGAACTTTCGAGACCGCCGAAGAAGCCGCCCGTGCTTACGATGAAGCCGCTTGTCTTCTTCGAGGTTCGAACACAAGAACCAATTTCATTCCTCAAATCTCAACAAATTCCCCAATCGCTTCTCGGATTCGTTCTCTCTTAAACaCCAAAAAAACCGTAAATCGAAAACCCCCGGAAAAACCCACCACCTCCGCCGCCGTCTCTGCCGGTTCCGCCGTCGTGGACCCGTCAATTAAAGACGATGGATTGTTCGAGGGAGCGTATAAACCGGATATGACTAATTGTTTGGAAGAAAGAGAGGTGAGTTCTTGTGATTCGTGTTGCTCTGAATCTTGTGAATTGGGGGTTTCATTGGCGGAGAATGGGACA MEIDFQSPEIHRGATASIIKSTKFKGRNRSNNNGNKFVGVRQRPSGRWVAEIKDTTKKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFIPQISTNSPIASRIRSLLNTKKTVNRKPPEKPTTSAAVSAGSAVVDPSIKDDGLFEGAYKPDMTNCLEEREVSSCDSCCSESCELGVSLAENGT
BLAST of Cucsa.334870 vs. Swiss-Prot
Match: RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana GN=RAP2-11 PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.1e-32 Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = 1
BLAST of Cucsa.334870 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 6.1e-17 Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 1
BLAST of Cucsa.334870 vs. Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 7.9e-17 Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 1
BLAST of Cucsa.334870 vs. Swiss-Prot
Match: ABI4_ARATH (Ethylene-responsive transcription factor ABI4 OS=Arabidopsis thaliana GN=ABI4 PE=1 SV=2) HSP 1 Score: 85.9 bits (211), Expect = 5.1e-16 Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = 1
BLAST of Cucsa.334870 vs. Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 6.7e-16 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 1
BLAST of Cucsa.334870 vs. TrEMBL
Match: A0A0A0L1B8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G192030 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 2.8e-101 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1
BLAST of Cucsa.334870 vs. TrEMBL
Match: A0A067L5C6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02710 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.5e-49 Identity = 106/188 (56.38%), Postives = 131/188 (69.68%), Query Frame = 1
BLAST of Cucsa.334870 vs. TrEMBL
Match: D7TI77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g07250 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 9.3e-49 Identity = 113/184 (61.41%), Postives = 134/184 (72.83%), Query Frame = 1
BLAST of Cucsa.334870 vs. TrEMBL
Match: B9I5W8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s05330g PE=4 SV=2) HSP 1 Score: 198.4 bits (503), Expect = 7.9e-48 Identity = 108/192 (56.25%), Postives = 133/192 (69.27%), Query Frame = 1
BLAST of Cucsa.334870 vs. TrEMBL
Match: A0A0B2RSB3_GLYSO (Ethylene-responsive transcription factor RAP2-11 OS=Glycine soja GN=glysoja_011240 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.0e-47 Identity = 109/188 (57.98%), Postives = 129/188 (68.62%), Query Frame = 1
BLAST of Cucsa.334870 vs. TAIR10
Match: AT5G19790.1 (AT5G19790.1 related to AP2 11) HSP 1 Score: 139.0 bits (349), Expect = 2.9e-33 Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = 1
BLAST of Cucsa.334870 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2) HSP 1 Score: 89.0 bits (219), Expect = 3.4e-18 Identity = 46/100 (46.00%), Postives = 62/100 (62.00%), Query Frame = 1
BLAST of Cucsa.334870 vs. TAIR10
Match: AT5G13910.1 (AT5G13910.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 88.6 bits (218), Expect = 4.5e-18 Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 1
BLAST of Cucsa.334870 vs. TAIR10
Match: AT2G40220.1 (AT2G40220.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 85.9 bits (211), Expect = 2.9e-17 Identity = 49/121 (40.50%), Postives = 66/121 (54.55%), Query Frame = 1
BLAST of Cucsa.334870 vs. TAIR10
Match: AT5G18560.1 (AT5G18560.1 Integrase-type DNA-binding superfamily protein) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-16 Identity = 49/115 (42.61%), Postives = 67/115 (58.26%), Query Frame = 1
BLAST of Cucsa.334870 vs. NCBI nr
Match: gi|449462796|ref|XP_004149126.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis sativus]) HSP 1 Score: 375.9 bits (964), Expect = 4.0e-101 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1
BLAST of Cucsa.334870 vs. NCBI nr
Match: gi|700198773|gb|KGN53931.1| (hypothetical protein Csa_4G192030 [Cucumis sativus]) HSP 1 Score: 375.9 bits (964), Expect = 4.0e-101 Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1
BLAST of Cucsa.334870 vs. NCBI nr
Match: gi|659082707|ref|XP_008441991.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Cucumis melo]) HSP 1 Score: 353.6 bits (906), Expect = 2.1e-94 Identity = 179/187 (95.72%), Postives = 179/187 (95.72%), Query Frame = 1
BLAST of Cucsa.334870 vs. NCBI nr
Match: gi|802585450|ref|XP_012070434.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas]) HSP 1 Score: 203.4 bits (516), Expect = 3.5e-49 Identity = 106/188 (56.38%), Postives = 131/188 (69.68%), Query Frame = 1
BLAST of Cucsa.334870 vs. NCBI nr
Match: gi|225441591|ref|XP_002281619.1| (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Vitis vinifera]) HSP 1 Score: 201.4 bits (511), Expect = 1.3e-48 Identity = 113/184 (61.41%), Postives = 134/184 (72.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |