Cucsa.271980 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATTTCAATCTCGAGCTTCCATCTTCTTCATTCGATCCTTTCTGCAGTCGGAATTCGGTGATCAGTTGAAAGTGCAGAAGCCAATTATGGGAGGCGGTGGACATGGAGCTGGAACTACTTTCAAGGGCGTGACCATACACCCaCCAAAGCGATGGCACACCGTCACCGGCAAGGGACTGTGCGCCGTTATGTGGTATAAACCCTAGCTTCATTAGTTTCCGATCGACAAATTCTATTGAAGGAAACTAAATTTGATTTTCTCTTTTCAGCCAAATTGCCCCATAGTTAATTTCTTTACTTTCTTTCTCTGTTTTACAAGTCCTGCGTCTAGTCCGATCTGTCCTCATCGCATTATTCCAAATAAACGCATCGCGATCGAGTGGAGTTACAAGTTTTAATATTATCTTGATGCCAGATGCTATATTTGAGTTCATCGTCTCGTATGCAATTTGATGTTGAGTGGAAATTAAAAGAGCTTCAGAATCTGTAGGATTGACTATTGAGAAATTGGCATCTGGGTATTGACCAGATTTTTTATGACTGTCTTTCAGGTTTTGGGTGCTATACAGGGCGAAACAAGATGGACCTGTAGTACTGGTAAAAATCACTGTTCCcTTAGTCGTAAATTACATTTCTACTTATTTTTGGTTAAAATCTCTAGATTTTCTGGCTGAAGTTCTTGAGGATATACATGTTAGAGGGCATcTTTTtGGAGCGATTTTAAAATGGTTAAAATCATTTAGTTGTTTTCAAATTCAGTATGAAAAATTCAATTAGAAGTGTAAAATTgAACATTAAATTGATTTTAGGTGATTAAAGCTTAACTTTgTGTTTCAAAGTTATTTTAAATATGACAAAAAGTGACGTTAACCATTTTCTAAaCACTTGGTTGCCATTTTTAGCTTACATTGTATGTATTTTCTATTACAGAAAATCTTACTTTTGTAATATTTGTTACGATCAGGGCTGGAGACATCCATGGGAAGGTCATGGTCATGGTGATCATGGAAATGAGCACTAGGTACTGTTTTTATGATTTACCTCTCTTTCCAAATTTCCCCAATTAATTATCTGTTTTTATAGAGAGAAAAAGTCAAAACAAAGTGTGTCCTAGCTTTCTGATATAATTACAACACTGAACTATTAGCCACTTGACATCAGGTAATATGAGCGCTATCAGCTATGGGAACTTTTTTTCTTTGGTTGGAGTACATTTCTATTGATAAGCTTTCCAGTTTACTTGTAGGCTTCCTGCTAATGGTGGGCGAAGGGGAAATGGCAAGGCCTCAGTTGCAGGTTCTCTATTTGAATGTTCAGAGTACCATATTTGCTAAGTTCTGTTCAAATAAGGATATTGTGATAGCCAAATGGATATAAACACCACTTCATCATTTTTATTTTGTAATCATGAATTCTTCTGATGTGTTTTGAATATTTAATTTGTGTTCAATCACCGCTGTTGTTGAGTTGAAGCAAAGATCAATTCCCTATTTCTGAATATAGGCTGTACTTTTATTTCACTATGTCTTTTGCATGGCGCATACCTTTCTTTTAAACTAaGGTTGTTCCATTTGGATAATTTGATCTGCTCAAACTGAAATTCATGTACCAATGGTGATGAAGTATTAGTGAATTGCTACCCTTGAATCTAGTGTCACAACAATGGGATTTTATTTGCCATGAGACAGTTACAGGCATTGTATTTGCATAATTCCTCTAGAAACTTAACTGAAGTGATACGAAGAATGCATAGAAAGAG TGATTTCAATCTCGAGCTTCCATCTTCTTCATTCGATCCTTTCTGCAGTCGGAATTCGGTGATCAGTTGAAAGTGCAGAAGCCAATTATGGGAGGCGGTGGACATGGAGCTGGAACTACTTTCAAGGGCGTGACCATACACCCACCAAAGCGATGGCACACCGTCACCGGCAAGGGACTGTGCGCCGTTATGTGGTTTTGGGTGCTATACAGGGCGAAACAAGATGGACCTGTAGTACTGGGCTGGAGACATCCATGGGAAGGTCATGGTCATGGTGATCATGGAAATGAGCACTAGGTACTGTTTTTATGATTTACCTCTCTTTCCAAATTTCCCCAATTAATTATCTGTTTTTATAGAGAGAAAAAGTCAAAACAAAGTGTGTCCTAGCTTTCTGATATAATTACAACACTGAACTATTAGCCACTTGACATCAGTTTACTTGTAGGCTTCCTGCTAATGGTGGGCGAAGGGGAAATGGCAAGGCCTCAGTTGCAGGTTCTCTATTTGAATGTTCAGAGTACCATATTTGCTAAGTTCTGTTCAAATAAGGATATTGTGATAGCCAAATGGATATAAACACCACTTCATCATTTTTATTTTGTAATCATGAATTCTTCTGATGTGTTTTGAATATTTAATTTGTGTTCAATCACCGCTGTTGTTGAGTTGAAGCAAAGATCAATTCCCTATTTCTGAATATAGGCTGTACTTTTATTTCACTATGTCTTTTGCATGGCGCATACCTTTCTTTTAAACTAAGGTTGTTCCATTTGGATAATTTGATCTGCTCAAACTGAAATTCATGTACCAATGGTGATGAAGTATTAGTGAATTGCTACCCTTGAATCTAGTGTCACAACAATGGGATTTTATTTGCCATGAGACAGTTACAGGCATTGTATTTGCATAATTCCTCTAGAAACTTAACTGAAGTGATACGAAGAATGCATAGAAAGAG ATGGGAGGCGGTGGACATGGAGCTGGAACTACTTTCAAGGGCGTGACCATACACCCaCCAAAGCGATGGCACACCGTCACCGGCAAGGGACTGTGCGCCGTTATGTGGTTTTGGGTGCTATACAGGGCGAAACAAGATGGACCTGTAGTACTGGGCTGGAGACATCCATGGGAAGGTCATGGTCATGGTGATCATGGAAATGAGCACTAG MGGGGHGAGTTFKGVTIHPPKRWHTVTGKGLCAVMWFWVLYRAKQDGPVVLGWRHPWEGHGHGDHGNEH*
BLAST of Cucsa.271980 vs. Swiss-Prot
Match: NDUB2_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 OS=Arabidopsis thaliana GN=At1g76200 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 8.6e-33 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1
BLAST of Cucsa.271980 vs. TrEMBL
Match: A0A0A0L0L4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G653460 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 1.3e-38 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1
BLAST of Cucsa.271980 vs. TrEMBL
Match: B9R8J8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1600460 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 2.5e-31 Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 1
BLAST of Cucsa.271980 vs. TrEMBL
Match: D7KTA9_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476772 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 9.6e-31 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1
BLAST of Cucsa.271980 vs. TrEMBL
Match: A0A068UI62_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024542001 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 9.6e-31 Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 1
BLAST of Cucsa.271980 vs. TrEMBL
Match: A0A151RAS0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_039011 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.3e-30 Identity = 60/69 (86.96%), Postives = 61/69 (88.41%), Query Frame = 1
BLAST of Cucsa.271980 vs. TAIR10
Match: AT1G76200.1 (AT1G76200.1 unknown protein) HSP 1 Score: 140.2 bits (352), Expect = 4.9e-34 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1
BLAST of Cucsa.271980 vs. NCBI nr
Match: gi|449455585|ref|XP_004145533.1| (PREDICTED: NADH dehydrogenase [ubiquinone]) HSP 1 Score: 166.4 bits (420), Expect = 1.8e-38 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1
BLAST of Cucsa.271980 vs. NCBI nr
Match: gi|659104403|ref|XP_008452937.1| (PREDICTED: NADH dehydrogenase [ubiquinone]) HSP 1 Score: 157.9 bits (398), Expect = 6.4e-36 Identity = 64/67 (95.52%), Postives = 67/67 (100.00%), Query Frame = 1
BLAST of Cucsa.271980 vs. NCBI nr
Match: gi|255539152|ref|XP_002510641.1| (PREDICTED: NADH dehydrogenase [ubiquinone]) HSP 1 Score: 142.1 bits (357), Expect = 3.6e-31 Identity = 58/68 (85.29%), Postives = 63/68 (92.65%), Query Frame = 1
BLAST of Cucsa.271980 vs. NCBI nr
Match: gi|661888870|emb|CDP07313.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-30 Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 1
BLAST of Cucsa.271980 vs. NCBI nr
Match: gi|18411047|ref|NP_565128.1| (uncharacterized protein [Arabidopsis thaliana]) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-30 Identity = 55/69 (79.71%), Postives = 61/69 (88.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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