Cucsa.249870 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGTAAAATTGAGTAAAAGAGAAAACGAGGAAGGAACGATTTCTCATTCGAACTCCTCTCGCAATGGAGACCTTGCAGAATCCAAACGCAAACACCAATTCCAATCCAAATACCATATCTTCCCCAATTCGTGTGTTATGGCCTACCATCGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCTCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGATCCCGCTCGTTTCCTCGCATCCGACCCTGTGAGTTTTCCTCTCTTAACTTCTACTTTCAATTATTTCTGAAATTTTCACACTCATTGCTGTTCAAAGAAAAATATGATTAGGATCCTATTGTTGGATTTATCATACCTCAATATTCATGAGCATCAACAATTATATTTTAACTTCATTTTGCTTCACTGGTTATGTTTTAATGTGTGGTAGGCAATAACTCAAATTATTTTGTACAGAAATACATGACGCTATTGTAATGTAGATATTTGTGTTAGAAAACCCGACGCCCATCGGTCAATCCTTGTTCATCTGTTGTTTTTTCCGTAGGCTTGGTTTGTAAATACTAAGCCTGTTTGTTTGTGCAAATATCCTACCTTTTTAATTATTCCTTCTCATTGTTGTTTGCTTGGTCGTGGCGACTACATTATTGTTTTGAGTTTGATAGCTTTTATAATAATACTTTAAGGATGATACCTTGGTACTTCTCATAATTTGATGAATTAAATGGATAGAAGATCAGTAATCGTGTTCAAATTCAATAAATTGAGCCTTAAGAATTTGTTGTTCTTTTCCTTATGCTTGGTCGGTAGATACTAGAAGTTCTAACCTGTTTATTTGTGCAAATACCCTGACTGTTTTATGTTCTACAAAGGACAGACATATATAGATTGGGTACATCAAATGGGGATTGGAGGAATTTGAACCTTTGATCCCAAGTAAGGTAGCACACTCTAATTACTATTGGTCTAGGCTCACTTTAGTCAAAGTGCTAATGCTTTTGAAGGAAGGTAAAATTTATTGGCTCTTACGCTCCAAGTATCACATTTGTAAATAAGCTTTTGATTGTTTGTTGAAGTTGTAGTTCAATTGAGCTTTATTATGCATATCCCGTCTTCTTATGATTCTTTTTGTGAAAATTTTGGTCAAGATTCTTGCATGTTGTCTGCCAAGTATGCAGCAATTTAAACTTTTGGCCTCAGATTATTTGTCATAGTAGTTGGTCCTTTCAACTTCATTTGGCATATCCTCTTTTTGGGAATTATGCGTGTGAACTTTGTTATGCATTTATTTTATGCACCTCGAGCTGTGTATACACGTCTATATGTACAAATTTAATCATAAACCAACTAGGAAAATTAGGATGGTTATGTATATAAGAAGGTTGGGTCTTGTGTGTTTGCATGCATATGGACGAGAAATGCTCAAAGGGGGACATTCCATGGTTGTTTACTATACATTGAATGCATTATCTCTATCTTTACGTATCTTCTTCGTCGTATGAGTATTGATTGTTTGGAGTGGAGATACTCTCCAAAACCCGTGGTTCAAGCCCACGGAAAATAGGAGTGGCTTGGTTTTGTGTGTTGTTGCTAATTTAGTTAATAAGGGTGGCCTATCTTGAATTGCATGCGTATATATCAATGAATTTGATTCAAAAATGAAGGTTGGTCGGTTGTCTTTTTTTGATAAGTGTATAATAGGGGTGATTAAACTTAGTTATTATGTACTTGTTCTTACCATTCAATTGAAACATCCATGCTAGCTACACAGAACCTTGTTAGTAATAATTAATAAGTAAAATTGTTTTATAGTTTTATTTATAGTTTACTTTAACAACGACTACTATAATTTTAATATAACAATGAATTTATTTGAGATGAATAGTGTGTATGCTTCAAAGCTTTTCAGTCGGTCATTCTGATAAGATCAATAATTCTGAGGATACTCCTTTTCCAAGACCATTAATCATTGGTAACACAAATAGAATTCTATATTTATTTGCAAAAAAATCGTAGAAGTTCCACATGTTTTATAAAGATGAGTTGTTTCTTTGGGTTTGTTTATTATGAAAAGTTTGACACTAGATAAAATCCAGAATTTTGTATCATCTCTCTCTGAATGGCTATCCCATGAAATTTTTAGGATGAGATCGCGTCCATAGTATCAATGAGGAGACGGTACTGAGGACTCGTTCGTTCAAATGCTATAATAGGTTACAACTTCTGAAGGAAGTCAGTCAACATATTTTCAGTCATAACTTCTCGATCTTTAGTCAAGAGTACCGAAGAATTAATGAGGGTATAACTGGGCCCAGGAGTGAAGTTGAGGACTTACGAGTTTCTGTCTTCCTACCTTTTATGGATGGTGTTCCTTACATACAGATATTATGATTGATTCTCATCTTTTATTCAAATAACTTATGGTCTTTTCATTTTTTTTGTAATCTCCTTGATTTTTTTGGGAGATGGTCAGATATCTTGTCAAGTTCCCATAACTTTAGGCTATCATAATTCTTTCCTGGAAATTTTGGGTATGTATTTCTGTTTATAGTTATTCCTAGAACCAGGTGTGGTAGAATATTAATTTTTATTTAATAGACATTTACTTGAGCTGTTTTTCACATTAACTACTTTTAGGGTCAGTCCAATTACCTAACAATTTGAAATTGTTGTTTCTTTAGATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTTCATGGCCATTATTTCGTCTTGGGCATTAACATTTTCCATTGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAAGTAGGATTAACAGGTTGGAGCTAGTCTGGTTCCCTCCCTTCGGCAACCAACTTCAACCTTCTTCTATATTTCAAAATTTGTAACTCTTGACGGTCATTGTTTTCTTGAAAGATCAAAGTTGAAGCTTTTGGTTTCCCTTCTTCAAGTGCTCCAATTGTCGAACATGAACATTTGCATTACCCATGTTGATTCATGTTAATAGTTGATGCACAAGTTTGAACCGGGTCTCCCTTCAACTGCGAACTAAGATTTGTGGATAAAAATCTAAACCGGTTCTCTTGAATTCTTCTTTGCTTTCTTTTTGTCCCACTTTCAATACTATAAGTCGTGCTCTTTTCTGGTTCCCCTACTTCAGAACATCCATTTTGAAGGTGGAATACATCTGGAAGCAAGTTAGAAACTCCCTTAAAATTCTTAGGGGATGGTAGTGTACAGTGATCAACAATCCCCAAAAGAAAGGTATGATTATTGTATACTGTAGCACTCCTTGTTATGGATATATTAGGATAACTAGTACGGTTGGTAAAAGCGTATTTTAGTAAATATAGTTTTCTTTAGAACTTTTAGTTATAAATTAGAGGGAGTGTGGTTGAGAGAATTTTTCTGTGGGATTTTCTATCGAGAGGGCTATTAGGGAGAGGCTGGCTCTCTTGAAAGGCTAGATTATCTTGTTACTCTTCCTATTGATATTACAACAAATTTTCATATATTTC GAAGTAAAATTGAGTAAAAGAGAAAACGAGGAAGGAACGATTTCTCATTCGAACTCCTCTCGCAATGGAGACCTTGCAGAATCCAAACGCAAACACCAATTCCAATCCAAATACCATATCTTCCCCAATTCGTGTGTTATGGCCTACCATCGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCTCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGATCCCGCTCGTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTTCATGGCCATTATTTCGTCTTGGGCATTAACATTTTCCATTGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAAGTAGGATTAACAGGTTGGAGCTAGTCTGGTTCCCTCCCTTCGGCAACCAACTTCAACCTTCTTCTATATTTCAAAATTTGTAACTCTTGACGGTCATTGTTTTCTTGAAAGATCAAAGTTGAAGCTTTTGGTTTCCCTTCTTCAAGTGCTCCAATTGTCGAACATGAACATTTGCATTACCCATGTTGATTCATGTTAATAGTTGATGCACAAGTTTGAACCGGGTCTCCCTTCAACTGCGAACTAAGATTTGTGGATAAAAATCTAAACCGGTTCTCTTGAATTCTTCTTTGCTTTCTTTTTGTCCCACTTTCAATACTATAAGTCGTGCTCTTTTCTGGTTCCCCTACTTCAGAACATCCATTTTGAAGGTGGAATACATCTGGAAGCAAGTTAGAAACTCCCTTAAAATTCTTAGGGGATGGTAGTGTACAGTGATCAACAATCCCCAAAAGAAAGGTATGATTATTGTATACTGTAGCACTCCTTGTTATggatatattaggataactagtacggttggtaaaagcgtattttagtaaatatagttttctttagaacttttagttataaattagagggagtgtggttgagagaatttttctgtgggattttctatcgagagggctattagggagaggctggctctcttgaaaggctagattatcttgttactcttcctattgatattacaacaaattttcatatatttc ATGGAGACCTTGCAGAATCCAAACGCAAACACCAATTCCAATCCAAATACCATATCTTCCCCAATTCGTGTGTTATGGCCTACCATCGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCTCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGATCCCGCTCGTTTCCTCGCATCCGACCCTATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTTCATGGCCATTATTTCGTCTTGGGCATTAACATTTTCCATTGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAAGTAGGATTAACAGGTTGGAGCTAG METLQNPNANTNSNPNTISSPIRVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPYIVGSAIGFGVFMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKVGLTGWS*
BLAST of Cucsa.249870 vs. Swiss-Prot
Match: PEN2_ARATH (Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana GN=At5g09310 PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.6e-48 Identity = 92/134 (68.66%), Postives = 113/134 (84.33%), Query Frame = 1
BLAST of Cucsa.249870 vs. Swiss-Prot
Match: PEN2_BOVIN (Gamma-secretase subunit PEN-2 OS=Bos taurus GN=PSENEN PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.7e-08 Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 1
BLAST of Cucsa.249870 vs. Swiss-Prot
Match: PEN2_HUMAN (Gamma-secretase subunit PEN-2 OS=Homo sapiens GN=PSENEN PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.3e-08 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1
BLAST of Cucsa.249870 vs. Swiss-Prot
Match: PEN2_MOUSE (Gamma-secretase subunit PEN-2 OS=Mus musculus GN=Psenen PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1
BLAST of Cucsa.249870 vs. Swiss-Prot
Match: PEN2_RAT (Gamma-secretase subunit PEN-2 OS=Rattus norvegicus GN=Psenen PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-07 Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 1
BLAST of Cucsa.249870 vs. TrEMBL
Match: A0A0A0LK38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G302290 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 2.5e-72 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of Cucsa.249870 vs. TrEMBL
Match: A0A0B2PPM2_GLYSO (Putative gamma-secretase subunit PEN-2 OS=Glycine soja GN=glysoja_011887 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.0e-52 Identity = 102/129 (79.07%), Postives = 113/129 (87.60%), Query Frame = 1
BLAST of Cucsa.249870 vs. TrEMBL
Match: I1KBJ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G153700 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.0e-52 Identity = 102/129 (79.07%), Postives = 113/129 (87.60%), Query Frame = 1
BLAST of Cucsa.249870 vs. TrEMBL
Match: G7JBL2_MEDTR (GDP-mannose transporter, putative OS=Medicago truncatula GN=MTR_3g096320 PE=2 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.7e-52 Identity = 101/134 (75.37%), Postives = 113/134 (84.33%), Query Frame = 1
BLAST of Cucsa.249870 vs. TrEMBL
Match: A0A061DKH3_THECC (GDP-mannose transporter, putative OS=Theobroma cacao GN=TCM_001495 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 2.9e-52 Identity = 99/129 (76.74%), Postives = 116/129 (89.92%), Query Frame = 1
BLAST of Cucsa.249870 vs. TAIR10
Match: AT5G09310.1 (AT5G09310.1 Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379)) HSP 1 Score: 193.4 bits (490), Expect = 9.3e-50 Identity = 92/134 (68.66%), Postives = 113/134 (84.33%), Query Frame = 1
BLAST of Cucsa.249870 vs. NCBI nr
Match: gi|778670219|ref|XP_011649406.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis sativus]) HSP 1 Score: 279.3 bits (713), Expect = 3.6e-72 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1
BLAST of Cucsa.249870 vs. NCBI nr
Match: gi|659121942|ref|XP_008460893.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis melo]) HSP 1 Score: 248.4 bits (633), Expect = 6.9e-63 Identity = 126/161 (78.26%), Postives = 128/161 (79.50%), Query Frame = 1
BLAST of Cucsa.249870 vs. NCBI nr
Match: gi|1021582755|ref|XP_016180776.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Arachis ipaensis]) HSP 1 Score: 215.7 bits (548), Expect = 4.9e-53 Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 1
BLAST of Cucsa.249870 vs. NCBI nr
Match: gi|828315352|ref|XP_012571901.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Cicer arietinum]) HSP 1 Score: 214.9 bits (546), Expect = 8.4e-53 Identity = 106/138 (76.81%), Postives = 114/138 (82.61%), Query Frame = 1
BLAST of Cucsa.249870 vs. NCBI nr
Match: gi|955324463|ref|XP_014631956.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Glycine max]) HSP 1 Score: 214.2 bits (544), Expect = 1.4e-52 Identity = 102/129 (79.07%), Postives = 113/129 (87.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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