MELO3C023238.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023238.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	GDP-mannose transporter, putative
Location	chr11 : 460477 .. 467050 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAAGGGAGAAGGAACAGTTTAGCTTTAAGGATTCTGTTTCTCAAAGTCATTCGAACTCCTCTTGCAATGGAGACCTCGCATAATCCAAACGCAAACACCAATTCCAATCCTAATACCATAACGTCGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCTCGTTTCCTCGCATCCGACCCTGTGAGTTTTAACTTCTACTTTAAATTATTTCATAAATTTACACTTATACCTGATCTTTAAACCACGATAAACTTGAAATTTTCATACTTATTGCTGTTCGAAGAAAAATATGATTCGGATCCAGATCCTGTTGTTGGGTTTATCATACCTCAGTATTCATGAGCATCAACGATTATTCTTTGTTGTTGTTCTGTTTTTTTCGTTATATTTTAACTCCATTCTGCTTCACTAGTTATGTTTTAATGTGTGGAAGGCCAAAACTCAAATTATTTTGTACAGAAATACATGATGCTATTGTAATGTTGATATTTGTGTTAAAAAAACTGACGCCCATCGGTTAATCCTTGTTCATTTGTTGTTTTTTTCGTAGGCTTGGTATCTAGGTACTAGGCGTGTTTATTTGTGCAAATATCCTACCTTTCTAGTTATTCCTTCTTTTTGTTGTTTGCTTCATCGTGGCGACTACATTATTCTTTTGAGTTTGATAGCTTTTATAATAATACGTTAAGCGATGATACCTTGGTACTCCTCACAATTTGATGAATAAAATGGATAAAAGATTCGTAATCATGTTCAAATTCATTAAATTGAGCCTTAAGACTTTGTTGTTCTTTTCCTCAGGCTTGGTCTGTAGATACTAGGAGTTCTAACCTGATTATTTGTGCAAATACCCTGACTGTTTTATTCTACAAAGCATATACATATATATATTGGGTGCATCAAATGGGGATCGGAGGAACTTGAACCTTTGACCCCAAGTAAGGTAGCACACTGTAATTACTACTAACCTAGGCTCACTTTAATCAAAGTACTAATGCTTTTGAAGGAAGATAAAAATTATTGGCTCTTACGCTTCAAGTAGACAACATTTGCCAATAAGCTTTCGGTTGTGTGTTGAAGTTCTAATTCAATTGAGCTTTCCTATGCATATCCCATTACCTAGGACACCCAAGTATGCAGCAATCTGAAGTTTTGGCCTTAGATTATTTGTCATGGTGGTCTTTCAACTTCATTTGGCATATCCTCTTTTTGGGAATTATGCATATGAACTTTGTTATGCATCTATCTTATCCACCTAGAGCTGTGTGTACACGTATATATGTACAAATTTAATCATAAACCAACTAGGCAAATTAGGATGGCTATGCATACAAGAAGGGTGGGTCTTGTGTGTTTCCATGCATATGGATGAGAAACCCTCAAAAGGGGACAATCCATGGTTGTTTACTATACATTGAATGCATTATCTCTGTCTTCACATATCTCCTTTGTCGTACGAGCACTGGTTGTTTGTAGTGGAGATACTCTCCAAAACCCTAGGTTCAAGCCCATGGAAAATAAGAGTGGCTTGTTTTTGTGAGTGTGTGTTGTATGTAATTTAGCTAATAAGGGTGGCCTACCTTGGAGCGTATGCCTATATATCCATGGATTTAATTCAAAATTGACTAGGGGAGAAAAGTTTGGTTGTGTGTGTAGCAAGGTTGGTTTTTTTATACGTGTATTAGGGGTCATTAAACTTAAAGTTATTATGTGCTTGTTCTTACTTTCAGTTTAAATGATCCAATTCAACTTTCAATTTTTTATTTTTATTTTTATGTCTGTACATCCATGCTACACAGAACCTGCTAGTGATAATTATTAAGGAGAATTGTTTTATAGTGTGATTTATAGTTCACTGTAACAATGACTATTATAATTTTAATACAACAATGAGTTTGTTTGAGATCAATACTCTATATGCTTGAAAGCTTTTCAGACGGTCACTCTGATGCTGGAGTTTTCAAGATCAATAACTTTGGAGGATACTCCTTTTTCAAGACCATTTATCATTGGTAACACAGATAGAATTCTATATTTATTTTCAACAAATCGTAGAAGTTCCACATGTCTTAGAAAGATGAGTTGTTTCTTTGGGTTTGTTTACTATGAAAAGTTTGAGATGAAGTCCAGGATTTTGTATCATCTCTCTCTGAATGGGTGTCCTAGGTAATTGCAATAGTTGAAACTTTTAGGATGAGATCGCAGCCATAGGACGACGATCCACTGAACTTTAGCATGAGGAGATGGTACCGAGGACTCCCTCGTTCAAATTCTAATAATAGGTGTTACAACTTCCGAAGGAAGTCGGTCAACATATTTTCAGTCATTACTTATCGGTCTTTAATCAAGAGTACCGAAGAATTAATGAGGGTATAACTAGGCCTAGGAGTGAAATTGAGAACTTGGGAGTTTCCTGTTTTCCTAGCTTTTGTAGATGGTGTTCCTTACATAAAGATATTTACGATTGATTCTCATCTTTTATTCAAATAACTTGGTAGTCTTTTCATTTTTTGTGATCTCCTTGATTTTTTCTGGGAGAGGGTCAGATATCTTGTCGTTCTACAAAGTTCCCATAACTTTAGGCTATCATAATTTTTCTCTAGAAATTTTGGGTATGTATCTCTGTTTATAGTTATTCCTAGAACCACGTTATGGTAGAGTATTCATTTCTATTTAATAGACATTTACTTGAACTGTTTGACTGTTTTTCACATTAACTACTTTTAGGCTCAGTACAATTACCTAACGATTTGAAATTATCGTTTCTTTAGATATTGTTTAATGATTGGAAATTGTTGTTTTTGTTTAACAATTTGAAATTGTTGTTTCTTTAGATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTCCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATCGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAGTCTGGTTCCCTCTCTTCGGCAACCAACTTCAACCTTCTTGTATATATCAAAATCTGTAACTCTCTACTGTCATTGTTTTCTTGAAAGATCAAAGTTGAAGCTTTTGGTTTCCCTTCTTCAAGTGTTCCAATTGTCGAACATGAACCTTTGCATTACCCATGTTGATTCTTGTTAATAGTTGATTCACAAGTTTGAATCGGGTCTCCCTTCAACGGCGGACTAAGATTTGTGGATAAAATTCTAAACCGGTTCTCTTGAATTCTTCTTTGCTTTCTTTTTGTCCCACTTTCAATACTATAAGCCGTGCTCTTTTCTGGTTCCCCTACATCAAAACATCCATTTTGAAGGTTGAAAACATCTTGAAGCAAGTTAGAAACTCCCTTAAAATTCTTAAGGGACAGTGTACAGTGATCAACAATCCCCAAAAGAAAGGTATGATTGTATACTGTTACACTTCTTGTTATGGATATATTAGGATAACTAGTATGGTTGGTAAAAGGGTATTTTAGTAAATAGTTAGGTTTTTTTTATAGAACTTTTAGTTGTAAACAAGAGGGAGTGTGGTTGAGAGAATTTTTTTGTGGGATTTTCTTTCCAGAGGGCTATTAGGGAGAGAGTAGCTCTCTTGAAAGGCTAGATTATCTTGTTACTTTTCCTACTTTTCCTATTGATATTATAACAAATTTTCATATATTTCTATGATAGTGTTCTTTGTTGGTTTAGTTGTTCTTGAGTATTCTTGTTAAGGAGTATCTTATAAAATACCTCTACGATGGGACAATTAGGAGAATATGTGTATATATAGTTCTTAAGAATATTATTGTATTCCCAATTTGAGACATGTGCCATAGTTTGATTCATGCTATCAGATATCATTGAAACAAGTTTGTTTTCAAATGCTAGTTTTGGATAATTGCCTCCATCAGATTAAGCTGGGATTCACTTAATTAACTTCGGTTAGTAGAAATACTAATCTCTTGACATTTTTGTGGTGTCATCAATATCCAAATGGGAAAGCTAATCCCTAAAATAGAATAAGATGGAACCAAAAAACTTGACAGAAATAGGGAAGGATGGTGGATGGGTAGGGTTGGTGGGGGATTTGATTCTTGAATGATGTTTGCTTGGTTAGGTTTTCTTTATTACTATTCTTCTTTTCAATCTGGTTTTTCAATCTCAGCACATAGGATTTAGGTCGAGTTTTGAAAGTAAAGGATCTGTTACCTCCATAGAGCACCAAACTAATTTTTTTTTTCTTCTTAATCAATCATTATTTGAACAACAAAATCATTGTGTTACTGTGAGGTTAGTTTTGTTATTGACTTTTTCAATTAAAAGAAAATAGTGTTAGACGTTTGCCACATAATGATAATGATGATTTCTAATTTTAATCACATTAGATATGAATGGATATTAACAGTTGGCACATAGGGTTTTGCCTAGTTCAAAATCGATAGTCATTGCTGAATTTAGAAAAGAAAAATGTTCAATGTTGATAATAAATAAAATGATTTGGTTAATTTCTGAATCTTTTCTCTTGTGGATTAAGTTATTGGATATGGAAAAAAAGTGCTTTTTTATAAATGTGGAAAGATGAGGATTGCTGAATCAGTCCGTACAAAACCAACTTCTATCATTAAAATGATTCTGATTCTGAGTGATTTTGTCAAGGGAGCAGTAGGTTATATATATATATATATATATATCTTTTATTTTGTTAAAGGAAAACAATTATATCGGAGAAAACACTATACGTTGAAATTGTTATTTTTATCTCTCTATATTAAACTTATTGCATAGGGAGAAATCTCTATATCATTTTCAGGATGCTAAGGATATTGACCAAGATTTGAAATTTGATTGGCTCATTATTTATCAACTAATTCCCTTGTGATTTGAATGCATTTAATCAAATTCTATTGTTTCTGATTATTTATTTATTTTTGGTTTGCGTAAAATCTAAGATTTAAAAAGAAAAGTAAAAGATAAGAAGAGTTATCAAATGAATAAGACATACATACATACATATATATATATATATATATATCACAGATTTGATTGAATATAATTTGTGGGTACTTTGGATAATTACTTATTTTTATCTTGTTGTGTAACAAAAACTTCTCAACAAAACCAAAAAGTTGTTGTTGTTATTATTATTTATTATTATTTATTATTATTAATTAAAGGAAATAATTGAAAAGAACAAAACAAAAAAAGAATTCCTTTTGATGGCATATGACAAACTGTGTAACTGCACAGCCAGAAATGTATTAAGAGGGAATTTGGATTGTTTCTCAAAATCTCTAATGAACCAACAAATCAATTGCCTTTCCCCTGCACAGGTTGGTGAGATCACAATAACAAATAAAAATTTAACTGTCCACAATTAAGACATACCCCATTTTGTTATTTCTGATGTAATAAGTTGTTCTGTTTTGGCACTAACTTCACTAAATTAAGCTTCCAAATTTCATTATGCTGATTAAGCTATAGGTGGGGCTTCTCTTTGGGTTTTGTGCACTTTATTGCCAGCTTCAAATGGAAACATATACACACGTATATATGGTTGAAATGATAAGTTTAGCATGTGGTTCGATAGAAAGTTAGAGTTTAGTTTCGGTCATGGTCTTAAAAATACGATTTTAGTTTATATGATTTGATAAAGCCTTCATAAATCCTTTTATAATAGACTATTCATGAAAATTTTATCAAATCATATAGATTAAATTATAACTTTCTCTGAATTATAAGTATGATATTCATAATTTAACCTATATTTATCTTTAGAAAATAGGTTACGTTGATACTAAAATGCTACCAAAAATTCTCACATCATGACCTTCATGGGTTTTAAATGATAAATATAATTTGTAATTTTGGAGAAGAGATTACCAAGAACAAGGTGTTTTGGGATGACGAGTTGCACATGTGTTATATTTGTCGTAAATACTTTGATACTAATTAATTAGTTTAGAGCAGCAGAGGGGGCAAGCTTTTAATTCACGAGGAAAGAAGATGAAATTATTACTTTGTGTCAAACTATGATATGTATTTATAAGAACAGATAAGCCTAGGATTTCCCTAATCTCTTTTTATGAACTTTTTTCAAGAAGGCAAGGGCACAATGAGGTCAACTTGGAGGGAGAGTGTGACTCGAGCCAGCTCTTCGAGGGTGTAGATCAACCTCAACCTCAGAGAAGGCGGACCTTAGTCTCGAAGGTCGAGGCCGAGAGGTGGGCAATTGGATTGAATGACCAAGTTGCTTTCCATGGGTTCTCTTGGATTTTGTAAGGGTTTTTCGGACCCGTCTCTTGAAAATATTTTGAATCTTTCTTTTGAACACATTTCGAATTTGCGGAGAATTTGATTATCAATGTTATTTTTCTCTAGGTTCAAAAAATTACGGAAAACACGTGTTAAATTATAAATTAATACCTCAAATTTC

mRNA sequence

AGAAAAAGGGAGAAGGAACAGTTTAGCTTTAAGGATTCTGTTTCTCAAAGTCATTCGAACTCCTCTTGCAATGGAGACCTCGCATAATCCAAACGCAAACACCAATTCCAATCCTAATACCATAACGTCGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCTCGTTTCCTCGCATCCGACCCTCTTTTCAGACGGTCACTCTGATGCTGGAGTTTTCAAGATCAATAACTTTGGAGGATACTCCTTTTTCAAGACCATTTATCATTGATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTCCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATCGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAGTCTGGTTCCCTCTCTTCGGCAACCAACTTCAACCTTCTTGTATATATCAAAATCTGTAACTCTCTACTGTCATTGTTTTCTTGAAAGATCAAAGTTGAAGCTTTTGGTTTCCCTTCTTCAAGTGTTCCAATTGTCGAACATGAACCTTTGCATTACCCATGTTGATTCTTGTTAATAGTTGATTCACAAGTTTGAATCGGGTCTCCCTTCAACGGCGGACTAAGATTTGTGGATAAAATTCTAAACCGGTTCTCTTGAATTCTTCTTTGCTTTCTTTTTGTCCCACTTTCAATACTATAAGCCGTGCTCTTTTCTGGTTCCCCTACATCAAAACATCCATTTTGAAGGTTGAAAACATCTTGAAGCAAGTTAGAAACTCCCTTAAAATTCTTAAGGGACAGTGTACAGTGATCAACAATCCCCAAAAGAAAGGCAAGGGCACAATGAGGTCAACTTGGAGGGAGAGTGTGACTCGAGCCAGCTCTTCGAGGGTGTAGATCAACCTCAACCTCAGAGAAGGCGGACCTTAGTCTCGAAGGTCGAGGCCGAGAGGTGGGCAATTGGATTGAATGACCAAGTTGCTTTCCATGGGTTCTCTTGGATTTTGTAAGGGTTTTTCGGACCCGTCTCTTGAAAATATTTTGAATCTTTCTTTTGAACACATTTCGAATTTGCGGAGAATTTGATTATCAATGTTATTTTTCTCTAGGTTCAAAAAATTACGGAAAACACGTGTTAAATTATAAATTAATACCTCAAATTTC

Coding sequence (CDS)

ATGGAGACCTCGCATAATCCAAACGCAAACACCAATTCCAATCCTAATACCATAACGTCGCCAATTCCTGTGTTATGGCCGACCATTGATGGCTCTCTGGGTTTGTCGGAGGAAGAATCGGTGAGCTATGCCCGTAGGTTCTACAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCCCGCTCGTTTCCTCGCATCCGACCCTCTTTTCAGACGGTCACTCTGATGCTGGAGTTTTCAAGATCAATAACTTTGGAGGATACTCCTTTTTCAAGACCATTTATCATTGATATTGTTGGCTCAGCTATCGGCTTTGGTGTTTCCATGGCCATTATCTCGTCTTGGGCATTGACATTTTCCATCGGAGGAGAACGCCTGTTTGGACCTGTTTGGGATAAACTAGTGATGTACAATCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAG

Protein sequence

METSHNPNANTNSNPNTITSPIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS

Homology

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BLAST of MELO3C023238.2 vs. NCBI nr
Match: XP_008460893.1 (PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 7.2e-79
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA
Sbjct: 1   METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60

Query: 61  VNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVS 120
           VNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVS
Sbjct: 61  VNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVS 120

Query: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 162
           MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Sbjct: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 161

[Close]

BLAST of MELO3C023238.2 vs. NCBI nr
Match: XP_011649406.1 (PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis sativus] >KGN62163.1 hypothetical protein Csa_2G302290 [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 1.0e-53
Identity = 118/161 (73.29%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 1   METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           MET  NPN    XXXX     I VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA
Sbjct: 1   METLQNPNANTNXXXXTISSPIRVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60

Query: 61  VNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVS 120
           VNCFYFWPVLRSRSFPRIRP                             IVGSAIGFGV 
Sbjct: 61  VNCFYFWPVLRSRSFPRIRPY----------------------------IVGSAIGFGVF 120

Query: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 162
           MAIISSWALTFSIGGERLFGPVWDKLVMYNLADK+GLTGWS
Sbjct: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKVGLTGWS 133

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BLAST of MELO3C023238.2 vs. NCBI nr
Match: XP_022971629.1 (probable gamma-secretase subunit PEN-2 [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 8.3e-51
Identity = 107/140 (76.43%), Postives = 108/140 (77.14%), Query Frame = 0


Query: 22  IPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPS 81
           I VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRP 
Sbjct: 26  IAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPY 85

Query: 82  FQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGP 141
                                       IVGSAIGF V MAIISSWALTF+IGGERLFGP
Sbjct: 86  ----------------------------IVGSAIGFAVFMAIISSWALTFAIGGERLFGP 137

Query: 142 VWDKLVMYNLADKLGLTGWS 162
           VWDKLVMYNLADKLGLTGWS
Sbjct: 146 VWDKLVMYNLADKLGLTGWS 137

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BLAST of MELO3C023238.2 vs. NCBI nr
Match: XP_022931973.1 (probable gamma-secretase subunit PEN-2 [Cucurbita moschata])

HSP 1 Score: 207.6 bits (527), Expect = 3.1e-50
Identity = 106/140 (75.71%), Postives = 107/140 (76.43%), Query Frame = 0


Query: 22  IPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSRSFPRIRPS 81
           I VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRP 
Sbjct: 26  IAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPY 85

Query: 82  FQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGP 141
                                       IVGSAIGF V MAIISSWALTF+IGGERLFGP
Sbjct: 86  ----------------------------IVGSAIGFAVFMAIISSWALTFAIGGERLFGP 137

Query: 142 VWDKLVMYNLADKLGLTGWS 162
           VWDKLVMYNLADKLGLTGWS
Sbjct: 146 VWDKLVMYNLADKLGLTGWS 137

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BLAST of MELO3C023238.2 vs. NCBI nr
Match: XP_023532347.1 (probable gamma-secretase subunit PEN-2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48
Identity = 115/166 (69.28%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 1   METSHNPN----XXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLP 60
           ME+S NPN    XXXXX        I  LWPTIDGSLGLSEEESVSYARRFYKFGFALLP
Sbjct: 1   MESSPNPNXXXXXXXXXIQNPVSSQIAALWPTIDGSLGLSEEESVSYARRFYKFGFALLP 60

Query: 61  FLWAVNCFYFWPVLR-SRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAI 120
           FLWAVNCFYFWPVLR S SFPRIRP                             IVGSAI
Sbjct: 61  FLWAVNCFYFWPVLRDSHSFPRIRPY----------------------------IVGSAI 120

Query: 121 GFGVSMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 162
           GF + MAIISSWALTFSIGGERLFGPVW+KLVMYNLADKLGLTGWS
Sbjct: 121 GFAIFMAIISSWALTFSIGGERLFGPVWNKLVMYNLADKLGLTGWS 138

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BLAST of MELO3C023238.2 vs. TAIR10
Match: AT5G09310.1 (Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379))

HSP 1 Score: 160.6 bits (405), Expect = 8.0e-40
Identity = 82/136 (60.29%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 25  LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPSFQ 84
           +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR    
Sbjct: 37  VWPTIDGPLGLTEEASVDYARRFYKFGFALLPWLWFVNCFYFWPVLRHSRAFPQIRNY-- 96

Query: 85  TVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVW 144
                                     +V SAIGF V  A++S+WALTFSIGGE+LFGP++
Sbjct: 97  --------------------------VVRSAIGFSVFTALLSAWALTFSIGGEQLFGPLY 144

Query: 145 DKLVMYNLADKLGLTG 160
           DKLVMYN+AD+LGL+G
Sbjct: 157 DKLVMYNVADRLGLSG 144

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BLAST of MELO3C023238.2 vs. Swiss-Prot
Match: sp|Q9FY84|PEN2_ARATH (Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana OX=3702 GN=At5g09310 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-38
Identity = 82/136 (60.29%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 25  LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SRSFPRIRPSFQ 84
           +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR SR+FP+IR    
Sbjct: 37  VWPTIDGPLGLTEEASVDYARRFYKFGFALLPWLWFVNCFYFWPVLRHSRAFPQIRNY-- 96

Query: 85  TVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVSMAIISSWALTFSIGGERLFGPVW 144
                                     +V SAIGF V  A++S+WALTFSIGGE+LFGP++
Sbjct: 97  --------------------------VVRSAIGFSVFTALLSAWALTFSIGGEQLFGPLY 144

Query: 145 DKLVMYNLADKLGLTG 160
           DKLVMYN+AD+LGL+G
Sbjct: 157 DKLVMYNVADRLGLSG 144

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BLAST of MELO3C023238.2 vs. TrEMBL
Match: tr|A0A1S3CDI1|A0A1S3CDI1_CUCME (probable gamma-secretase subunit PEN-2 OS=Cucumis melo OX=3656 GN=LOC103499635 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.8e-79
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA
Sbjct: 1   METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60

Query: 61  VNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVS 120
           VNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVS
Sbjct: 61  VNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVS 120

Query: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 162
           MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS
Sbjct: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 161

[Close]

BLAST of MELO3C023238.2 vs. TrEMBL
Match: tr|A0A0A0LK38|A0A0A0LK38_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302290 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.9e-54
Identity = 118/161 (73.29%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 1   METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           MET  NPN    XXXX     I VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA
Sbjct: 1   METLQNPNANTNXXXXTISSPIRVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60

Query: 61  VNCFYFWPVLRSRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVS 120
           VNCFYFWPVLRSRSFPRIRP                             IVGSAIGFGV 
Sbjct: 61  VNCFYFWPVLRSRSFPRIRPY----------------------------IVGSAIGFGVF 120

Query: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 162
           MAIISSWALTFSIGGERLFGPVWDKLVMYNLADK+GLTGWS
Sbjct: 121 MAIISSWALTFSIGGERLFGPVWDKLVMYNLADKVGLTGWS 133

[Close]

BLAST of MELO3C023238.2 vs. TrEMBL
Match: tr|A0A151SSX1|A0A151SSX1_CAJCA (Putative gamma-secretase subunit PEN-2 OS=Cajanus cajan OX=3821 GN=KK1_004232 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.5e-44
Identity = 97/162 (59.88%), Postives = 107/162 (66.05%), Query Frame = 0


Query: 1   METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           ME S + N             +P LWPTIDG LGLSEEESVSYARRFY FGFALLP LWA
Sbjct: 1   MEASESNNPNPNPIRNSLASSVP-LWPTIDGPLGLSEEESVSYARRFYNFGFALLPLLWA 60

Query: 61  VNCFYFWPVLR-SRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGV 120
           VNCFYFWPVLR S SFPRIRP                             ++GSA+GF V
Sbjct: 61  VNCFYFWPVLRHSHSFPRIRPY----------------------------VLGSAVGFAV 120

Query: 121 SMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 162
              ++SSWALTF+IGGERLFGPVWD+LVMYNLAD+LGLTGWS
Sbjct: 121 FATLLSSWALTFAIGGERLFGPVWDQLVMYNLADRLGLTGWS 133

[Close]

BLAST of MELO3C023238.2 vs. TrEMBL
Match: tr|A0A1S3EA88|A0A1S3EA88_CICAR (probable gamma-secretase subunit PEN-2 OS=Cicer arietinum OX=3827 GN=LOC105852216 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 8.5e-44
Identity = 97/159 (61.01%), Postives = 105/159 (66.04%), Query Frame = 0


Query: 4   SHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNC 63
           SH  N             +P LWPTIDG LGLSEEESV YARRFYKFGFALLP LWAVNC
Sbjct: 6   SHTNNPNLNLNSNPLASSVP-LWPTIDGPLGLSEEESVKYARRFYKFGFALLPLLWAVNC 65

Query: 64  FYFWPVLR-SRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGVSMA 123
           FYFWPV+R SRSFP IRP                             +VGSAIGF +S A
Sbjct: 66  FYFWPVIRHSRSFPTIRPY----------------------------VVGSAIGFTISAA 125

Query: 124 IISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 162
           ++ SWALTFSIGGERLFGPVWD+LVMYNLAD+ GLTGWS
Sbjct: 126 LLCSWALTFSIGGERLFGPVWDQLVMYNLADRFGLTGWS 135

[Close]

BLAST of MELO3C023238.2 vs. TrEMBL
Match: tr|V7AVQ0|V7AVQ0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G150900g PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.4e-43
Identity = 102/162 (62.96%), Postives = 111/162 (68.52%), Query Frame = 0


Query: 1   METSHNPNXXXXXXXXXXXXXIPVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWA 60
           MET +N  XXXXX        +PV WPTIDGSLGLSEEESVSYARRFYKFGFALLP LWA
Sbjct: 1   METQNNXXXXXXXHRNSLPSSLPV-WPTIDGSLGLSEEESVSYARRFYKFGFALLPLLWA 60

Query: 61  VNCFYFWPVLR-SRSFPRIRPSFQTVTLMLEFSRSITLEDTPFSRPFIIDIVGSAIGFGV 120
           VNCFYFWPVLR S SFPRIRP                             +VGSA+GF V
Sbjct: 61  VNCFYFWPVLRHSHSFPRIRPY----------------------------VVGSAVGFAV 120

Query: 121 SMAIISSWALTFSIGGERLFGPVWDKLVMYNLADKLGLTGWS 162
              ++ SWALTF+IGGERL GPVWD+LVMYNLAD+LGLT WS
Sbjct: 121 FATVLCSWALTFAIGGERLLGPVWDQLVMYNLADRLGLTSWS 133

The following BLAST results are available for this feature:

BLAST of MELO3C023238.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008460893.1	7.2e-79	100.00	PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis melo]	[more]
XP_011649406.1	1.0e-53	73.29	PREDICTED: probable gamma-secretase subunit PEN-2 [Cucumis sativus] >KGN62163.1 ...	[more]
XP_022971629.1	8.3e-51	76.43	probable gamma-secretase subunit PEN-2 [Cucurbita maxima]	[more]
XP_022931973.1	3.1e-50	75.71	probable gamma-secretase subunit PEN-2 [Cucurbita moschata]	[more]
XP_023532347.1	1.3e-48	69.28	probable gamma-secretase subunit PEN-2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C023238.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G09310.1	8.0e-40	60.29	Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterP...	[more]

BLAST of MELO3C023238.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FY84\|PEN2_ARATH	1.4e-38	60.29	Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana OX=3702 GN=At5g09...	[more]

BLAST of MELO3C023238.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CDI1\|A0A1S3CDI1_CUCME	4.8e-79	100.00	probable gamma-secretase subunit PEN-2 OS=Cucumis melo OX=3656 GN=LOC103499635 P...	[more]
tr\|A0A0A0LK38\|A0A0A0LK38_CUCSA	6.9e-54	73.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302290 PE=4 SV=1	[more]
tr\|A0A151SSX1\|A0A151SSX1_CAJCA	6.5e-44	59.88	Putative gamma-secretase subunit PEN-2 OS=Cajanus cajan OX=3821 GN=KK1_004232 PE...	[more]
tr\|A0A1S3EA88\|A0A1S3EA88_CICAR	8.5e-44	61.01	probable gamma-secretase subunit PEN-2 OS=Cicer arietinum OX=3827 GN=LOC10585221...	[more]
tr\|V7AVQ0\|V7AVQ0_PHAVU	1.4e-43	62.96	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G150900g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019379	Gamma_Secretase_Asp_P_PEN2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:1990570	GDP-mannose transmembrane transport
cellular_component	GO:0005798	Golgi-associated vesicle
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0070765	gamma-secretase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005458	GDP-mannose transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023238.2.1	MELO3C023238.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019379	Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit	PFAM	PF10251	PEN-2	coord: 110..151 e-value: 4.2E-6 score: 27.0 coord: 37..74 e-value: 7.1E-13 score: 48.7
IPR019379	Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit	PANTHER	PTHR16318	GAMMA-SECRETASE SUBUNIT PEN-2	coord: 24..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C023238.2	Csa2G302290	Cucumber (Chinese Long) v2	cumedB092
MELO3C023238.2	CSPI02G15770	Wild cucumber (PI 183967)	cpimedB092
MELO3C023238.2	Cucsa.249870	Cucumber (Gy14) v1	cgymedB418
MELO3C023238.2	CmaCh20G010610	Cucurbita maxima (Rimu)	cmamedB572
MELO3C023238.2	CmoCh20G010690	Cucurbita moschata (Rifu)	cmomedB562
MELO3C023238.2	Lsi10G007320	Bottle gourd (USVL1VR-Ls)	lsimedB058
MELO3C023238.2	CsGy2G015760	Cucumber (Gy14) v2	cgybmedB081
MELO3C023238.2	Cla007814	Watermelon (97103) v1	medwmB118
MELO3C023238.2	ClCG02G000500	Watermelon (Charleston Gray)	medwcgB089
MELO3C023238.2	Cla97C02G026740	Watermelon (97103) v2	medwmbB088
MELO3C023238.2	Carg24316	Silver-seed gourd	carmedB0726
MELO3C023238.2	CsaV3_2G018330	Cucumber (Chinese Long) v3	cucmedB097

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023238.2	Wax gourd	medwgoB134
MELO3C023238.2	Cucurbita maxima (Rimu)	cmamedB629
MELO3C023238.2	Cucurbita moschata (Rifu)	cmomedB618
MELO3C023238.2	Cucurbita pepo (Zucchini)	cpemedB305
MELO3C023238.2	Cucurbita pepo (Zucchini)	cpemedB312
MELO3C023238.2	Cucurbita pepo (Zucchini)	cpemedB787
MELO3C023238.2	Watermelon (97103) v1	medwmB128
MELO3C023238.2	Silver-seed gourd	carmedB1039