Cucsa.061590 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCTCAACTCAATCCCCTCCTTCTCTGCTGCTGCTGCTGTCGTCGTCGTCGTCGTCGACTCGTCGTCGTCTTTGTGACTGACTGACTGACTGTACCACCACCCTCGGCAGATGCAATCCACAACTGGTGCTGCTTCTACTGCTACTGCTACTGCTAGTAGTCGTACCTCCGCTGGCGGCGCCGGCCTTGCTCGCTTCCGCTCTGCTCCTGCTGCCTGGTTGGAAGCTCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCCCTGCTTGACTCAGCTTCTCGCCGCCAACTCCTCCGACCTCGATTCAGCTCCCGCGGATCACCCCTTGTTCGACCCCAATCCCTCTCCCGCCTTCCACAGGCAGAATAGCTCCCCACCTGAGTTTCTTGCTCCCTCTGGAATTGCTGAAGGATTTTACACCTCCTATCCTCTCAATTCCTCCCCTACTCTCGACATCTCTCCCACCTCCAAGCCATCTACAGATGTCGACGCCCAAAACTTCTTCCCCAAATTTTCACCTCAACTGGTAATCGTTTTATTTGCTGCCTTCTGTTTCACGATGCCCACTCATGATTTCTTTTCCCTTCAAATTATTTATCTGTAAATTTTGGGCAGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGAGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTAGTTCTTTTtAAAAGCTTATATCTATCTTCCTTCACTCTTTTCGTTGACCACTTTTCAATGACCAATCTCACTCtGCATAACGTTTGCTGACTTTTGAGATGGtAttTtttTtTTTTTTTTtttttGCTCTATTCACCATTCATCATCTGTGCTCTCTTGTTGCGTCTGTTTCATTCTTACTTTCTACCCCTTTCTGTTATTTGTTGCCAAGCTATGCTAAATCATCACGTTTGTCTAATCACTATAACAACACACAGCAAAAAAaTATTATTTACTTTTtTTTTtCCTGATGGTAGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAAGTTGTCCCCAACATGGATAAGGTAAACTATGTCATGGTTGATCGTTATGAATGAATTTGGATCTATCTTTTATGATATGTATTGAAAATTCTTTTCTGCCATGTGGTTCTGCTTGCAGTTCCTTCCTTGAATTCCATTTTTATTTTTGGCTTCTAGTTTAGGCTGGAACTTTACTTTATGATTAATGAAGTCTAACATGTTACAATTAGTTGAGTAATGGGGACAAGATTGTGTGGTTGGACGTGGACCATCCTTACTGATTTCAGATAATATTTTTTCCCTAACCATTTCTCATTGGTTGATGAAGTAGATTACCCAAAAAACAAAAAaGACTATCAGTGAGTAATTACGAAAACCACCTACATACCTACAGTGTGCTATGAGGGACAGTAGACTATATAATTACAAAATGCATTTTACATCTTCCGAGCAACAAAGCCATCTTACAAATTTTTtGGACTGATGAAGTTTACCAAACTTCACTGGAGTTGGTCTTAAATGGATGTGGCACGTGTGCTAATATATTGAATTTTTTTATCTTCTCATGTATCAGATGTTGGGAAATGCCGGTTTATTAATATGTAGGAAATAAACATTCATCTATTTTTTGGATAGTGAACAATTTTACTAAATAATGAAATAAACAAAATCGAGATACTATCCAAAGACGGAGAGTTTACAAAACCCTTCCCAATTGAAAAGGGAAGAATTTAAGCTGTCATTGTTGAAAGGAAGTATATTCTTACACCAGTAAAGAGCTATAGAGACAGTTGTTTCAAAGTTTTCTTGGGGATAAGTTTCTGTCTCTTGGAAAATCCTAAGATTCCTTTTGTTCCATATCTTCCATAAAACTGCTCTGATGATAAGTAGCCAAAGAATACTTTGTAGATTTGAATATGTATTCTATTTATAGCAATTCAAGTCAATTTGTAAGTTCTAAATGGTGGGACGACATTCCAACCAAAGGCACTAAAGACTTCAGTCCATATTTTTGCAGAGAAGGGAAGGgAAGGGAAGGGAAGGACAGGGGCAGTGAATGAAGATGTGCCTTTTAAGATTCTTCAGCTTCTTAATACTAACCAAACGATCTAGACCTCAGCTACATGCATTATGCCAATCGGCCCACCAATGGGGGAGCAACTTAAGATTGAACGTGTGAGGGTGAGGTTAGGATTGTATACACATATGCATTTGTTTGTTGGAATCCTGGAAGAACTTCAATGCATTTTGGTGACTTATCTTTGATGGTTGATTTTGTGATGAGAACTTCTGAATATTTTTATGGAAAGACAAACTTTTGGGTCTCCTCCATGAGGTTTCAAAGGAAAaCCTTAGTCCTTAAAGTTTCGAAATAAATTCTAAACAGTGCCTAGGATTTGACCGTTAGTTGACTAACGGAAAAATGCATTGATTAATCTAATGGTGCAGAGCTTGGGAGCGTCCACACTTCAACATGTTTTCTTTTCCAGTTGAGCTAAAAATTAGGTAAGCAAGGTGGAATGGCAGAGACGAAATTAGAAGCAGACTGAAGCTTCAATTCAACTAAGAGAAAACTGGAATCTGCCACCAACTTTAGAGCGAAAACAAAGGGTTGAGTTGACTGAAAGAGAGTTAGGAAAGAAATCTCAAAGTCTATTCCTGAGAGAAATCCATGTGCGCTATTCGAAAGGTGTCTAAGTAAATGCACATAATCTTTTTATACCCACCCTGATTCTATCTCTCTACAAACAAATTACCCAAAATAATAATTGATAATAATAATTCTTGTGAACATACATGGGTTTACTTTTAGCATGTAAACAGAGAAATGAGTTGGAACTGATAACTTGGTTTGGGTTTAGTGCTATTAGGATTTTTGGATGGAGGGACTTTCTTTCTAGATCTACTGGCAAACGAGCGTGAAGGTCATCTGCTCAGAACAAGCAAAAATGTGGTGGATAAGAGACAATGATGAAGGCATATGTCTTCAGATGATGATGGTGATAACTAGGAGGCATAGTAGGTAATTGTGGTCAGAGAAGAGCGGCGCTAATGACTAGAAGGGGAGAGAGTGGAGAAAGAAAaGGGAGAGAGGGAAGTTGGCAAGTTGGAAAAGCAAGTCACTAACTTAACCGAACACATTTTAATTCCGTTTGCGAAAGATCATTTTAAACCGAGGCTCAAACTTCAGGACCGATGATGCAAAATTACCATTTAAAAATTATTATGGGTAGGAAGGATGACATATCTTTCTTATTTCTGCAATGGTTGTTTATTTTAGGCTTGAACCCACGTGGTTTTCCTACTAGACATATTATCCTCTTATATATTCAAAAACTCTCTTTACTGTTTCTAACGCTTGTGAGACTATGTAAGCATTGTTTTCATTTCATATGGACAAAAGATTCATTTCCATTAACTTTAAACTTGAAACTAAGATCTGATTTATGGAAATTGTGAAACTATATGATGTCATCTATATTTGTTAGCTGAAGCATAAATAAATTTATCGATTTGTCATTTTCAATCTTCTTGCAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATCCAGGTATTCAACTGAATTAGCTAGACGCTGTCTTTAGATTCATCTATGACTACAAGTTTATGTGAAAACTGTTGGAGCCTCAAAAATCGTTTCTTCAATTATTACCTCAAATGATATCAGTTTGGAAACCTAATCTGTAACGGAGAAATATCACTTTGCTTCAAGTTACTACTGAAGTTTATGAAATTTATATGAACTGAATTGTCCCGAAACACCCAACAGGAACTTACGGAGCATCAGCGCAGGTGTAAATGCATGGTGAAAGAATAACAGGTTGAAGGAAGAATACTACTCCAGCCTGCAGAAATCGCCCTTCCACGATTAGTGTAAATTAGTAGGATTTCTGGGGACTTGAAAGGTCGTAAAAAGTAAATGAAGGTGTTTTAGCTATAATATTGTTATCTCTTTGGTTCTAAAGAAAATATCAACCTTGTAATGCATGCATTCAATATATATTGCATTCGTACGCAATAAGCAGGTGTAACAAAATGTTGGGGGACTCTTTTTTTTTtGGGAAAAAGAAATTGTTGAATAGTCCATTAGAACATTAGGTCTCTAATTTAAGGTACTCGTTCTGTGTAATTGTATTTTCAACATCCATCCA AATCTCAACTCAATCCCCTCCTTCTCTGCTGCTGCTGCTgtcgtcgtcgtcgtcgtcgactcgtcgtcgtcTTTGTGACTGACTGACTGACTGTACCACCACCCTCGGCAGATGCAATCCACAActggtgctgcttctactgctactgctactgctagtagtcgtacctccgctggcggcgccggccttgctcgcttccgctctgctcctgctgcCTGGTTGGAAGCTCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCCCTGCTTGACTCAGCTTCTCGCCGCCAACTCCTCCGACCTCGATTCAGCTCCCGCGGATCACCCCTTGTTCGACCCCAATCCCTCTCCCGCCTTCCACAGGCAGAATAGCTCCCCACCTGAGTTTCTTGCTCCCTCTGGAATTGCTGAAGGATTTTACACCTCCTATCCTCTCAATTCCTCCCCTACTCTCGACATCTCTCCCACCTCCAAGCCATCTACAGATGTCGACGCCCAAAACTTCTTCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGAGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAAGTTGTCCCCAACATGGATAAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATCCAGGAACTTACGGAGCATCAGCGCAGGTGTAAATGCATGGTGAAAGAATAACAGGTTGAAGGAAGAATACTACTCCAGCCTGCAGAAATCGCCCTTCCACGATTAGTGTAAATTAGTAGGATTTCTGGGGACTTGAAAGGTCGTAAAAAGTAAATGAAGGTGTTTTAGCTATAATATTGTTATCTCTTTGGTTCTAAAGAAAATATCAACCTTGTAATGCATGCATTCAATATATATTGCATTCGTACGCAATAAGCAGGTGTAACAAAATGTTGGGGGACTCTTTTTTTTTTGGGAAAAAGAAATTGTTGAATAGTCCATTAGAACATTAGGTCTCTAATTTAAGGTACTCGTTCTGTGTAATTGTATTTTCAACATCCATCCA ATGCAATCCACAACTGGTGCTGCTTCTACTGCTACTGCTACTGCTAGTAGTCGTACCTCCGCTGGCGGCGCCGGCCTTGCTCGCTTCCGCTCTGCTCCTGCTGCCTGGTTGGAAGCTCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCCCTGCTTGACTCAGCTTCTCGCCGCCAACTCCTCCGACCTCGATTCAGCTCCCGCGGATCACCCCTTGTTCGACCCCAATCCCTCTCCCGCCTTCCACAGGCAGAATAGCTCCCCACCTGAGTTTCTTGCTCCCTCTGGAATTGCTGAAGGATTTTACACCTCCTATCCTCTCAATTCCTCCCCTACTCTCGACATCTCTCCCACCTCCAAGCCATCTACAGATGTCGACGCCCAAAACTTCTTCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGAGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAAGTTGTCCCCAACATGGATAAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATCCAGGAACTTACGGAGCATCAGCGCAGGTGTAAATGCATGGTGAAAGAATAA MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISPTSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE*
BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH081_ARATH (Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 2.2e-67 Identity = 149/266 (56.02%), Postives = 181/266 (68.05%), Query Frame = 1
BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 4.9e-67 Identity = 145/263 (55.13%), Postives = 181/263 (68.82%), Query Frame = 1
BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 6.7e-32 Identity = 65/104 (62.50%), Postives = 85/104 (81.73%), Query Frame = 1
HSP 2 Score: 32.7 bits (73), Expect = 6.8e+00 Identity = 30/94 (31.91%), Postives = 47/94 (50.00%), Query Frame = 1
BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.7e-30 Identity = 65/102 (63.73%), Postives = 83/102 (81.37%), Query Frame = 1
BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH128_ARATH (Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 9.4e-26 Identity = 64/127 (50.39%), Postives = 84/127 (66.14%), Query Frame = 1
HSP 2 Score: 32.0 bits (71), Expect = 1.2e+01 Identity = 14/37 (37.84%), Postives = 29/37 (78.38%), Query Frame = 1
BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A0A0KY01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652220 PE=4 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 2.9e-135 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A061FKW9_THECC (Basic helix-loop-helix DNA-binding superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_036484 PE=4 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 2.9e-74 Identity = 164/264 (62.12%), Postives = 186/264 (70.45%), Query Frame = 1
BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A0B0NRZ3_GOSAR (Transcription factor bHLH80-like protein OS=Gossypium arboreum GN=F383_04086 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 3.8e-74 Identity = 157/259 (60.62%), Postives = 192/259 (74.13%), Query Frame = 1
BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A0D2S5I7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G138300 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 9.3e-73 Identity = 155/259 (59.85%), Postives = 191/259 (73.75%), Query Frame = 1
BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A087GD52_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G431300 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70 Identity = 150/241 (62.24%), Postives = 179/241 (74.27%), Query Frame = 1
BLAST of Cucsa.061590 vs. TAIR10
Match: AT4G09180.1 (AT4G09180.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 256.9 bits (655), Expect = 1.2e-68 Identity = 149/266 (56.02%), Postives = 181/266 (68.05%), Query Frame = 1
BLAST of Cucsa.061590 vs. TAIR10
Match: AT1G35460.1 (AT1G35460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 255.8 bits (652), Expect = 2.8e-68 Identity = 145/263 (55.13%), Postives = 181/263 (68.82%), Query Frame = 1
BLAST of Cucsa.061590 vs. TAIR10
Match: AT2G42280.1 (AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 139.0 bits (349), Expect = 3.8e-33 Identity = 65/104 (62.50%), Postives = 85/104 (81.73%), Query Frame = 1
HSP 2 Score: 32.7 bits (73), Expect = 3.8e-01 Identity = 30/94 (31.91%), Postives = 47/94 (50.00%), Query Frame = 1
BLAST of Cucsa.061590 vs. TAIR10
Match: AT1G51140.1 (AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31 Identity = 65/102 (63.73%), Postives = 83/102 (81.37%), Query Frame = 1
BLAST of Cucsa.061590 vs. TAIR10
Match: AT1G05805.1 (AT1G05805.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 118.6 bits (296), Expect = 5.3e-27 Identity = 64/127 (50.39%), Postives = 84/127 (66.14%), Query Frame = 1
HSP 2 Score: 32.0 bits (71), Expect = 6.5e-01 Identity = 14/37 (37.84%), Postives = 29/37 (78.38%), Query Frame = 1
BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|449447621|ref|XP_004141566.1| (PREDICTED: transcription factor bHLH81 isoform X1 [Cucumis sativus]) HSP 1 Score: 489.2 bits (1258), Expect = 4.2e-135 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|659119475|ref|XP_008459678.1| (PREDICTED: transcription factor bHLH80 isoform X1 [Cucumis melo]) HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-129 Identity = 237/244 (97.13%), Postives = 238/244 (97.54%), Query Frame = 1
BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|778708105|ref|XP_011656122.1| (PREDICTED: transcription factor bHLH81 isoform X2 [Cucumis sativus]) HSP 1 Score: 434.9 bits (1117), Expect = 9.5e-119 Identity = 222/244 (90.98%), Postives = 222/244 (90.98%), Query Frame = 1
BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|659119477|ref|XP_008459679.1| (PREDICTED: transcription factor bHLH80 isoform X2 [Cucumis melo]) HSP 1 Score: 416.8 bits (1070), Expect = 2.7e-113 Identity = 215/244 (88.11%), Postives = 216/244 (88.52%), Query Frame = 1
BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|590603789|ref|XP_007020097.1| (Basic helix-loop-helix DNA-binding superfamily protein isoform 2 [Theobroma cacao]) HSP 1 Score: 286.6 bits (732), Expect = 4.2e-74 Identity = 164/264 (62.12%), Postives = 186/264 (70.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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