CSPI06G30130 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G30130
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	EPIDERMAL PATTERNING FACTOR-like protein 1
Location	Chr6 : 25999118 .. 26000301 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGTGAAGATAGAAGAAGAGTGAAACAAATGCAAAGGGAAGAGTGGGTGAGTAAATGTGGTCCCTTTGCAGCAGCCAGGCTAGTGATGGACAGCCTAAAGCTGTAGAATAGAAGAATAGGGCGTCCTTTATTTGTGATGTGGATACTCCAAATTTGTTTTCCTTCACTGTATTGTTCCTTTCACTGTTCTGCTACAATCTGCCCTCTTACTCAGAACTTCTCTGCTCTCTCCTCTCTCGTTCTTGTCGGATAACTTATGACTCACCCACCCTTTTCTACACCAATTTATGCTATCTCTCTCTCGTCTCTCTCTCTCCTTCTCTTGCACTTGCCTCTCTTAAATACTCATCACTCTCTCTCTCTCTCTCTCAGCTACTTGTGGTTGTGGTGCGGTGGGTGAAAGTGGAACAAAGTAACAGAAAAATCTGGCAAATGGGTCTTTATTGCGTATGATTTTTACTTTACTCCTTTGCTTTGTTGGATCCATGGGTTCCTGGTATGAATGACTTGATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCTCCACCCAGAGTATGCTGTCTCTCATTTTCTCTCTCTCTCTTCCAGGGCTTCCTATATCATTCCATGTTTAATATTTCTATTAGTAACTCTATTTCCTTGTTTTTTTTTTTGTTTGATGGTTTCATCAGGGTATGTTTTTTGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCATGCATGGCTGTGCAAGTGCCTAGCATGCCCGGCCGCGCCAGCCGGTTGGACTCACCTTCGGCTTTGCCAATGAGATTTTTTGACTCGTCCTCTCAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGAAACCACTTCTTCAATCCGTAGACCAAATTTGCATGGCCACTATAGAGGGTTGGTCTTCTGGCTTTGTAAATGACATTGAGTTGTTCCTTCTTCTTTTCTTTTTATTATTATAAGGATGGAATTCTTTGTTCAGAGATAAGCAGGTTGTTCGGTTTTTGCATTTAATGTACATATACTCCAACTCTATACTATCTATCACCTAGAGAGATCAAAATTTACCCTACATTTTAGTT

mRNA sequence

ATGAATGACTTGATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCTCCACCCAGAGGTATGTTTTTTGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCATGCATGGCTGTGCAAGTGCCTAGCATGCCCGGCCGCGCCAGCCGGTTGGACTCACCTTCGGCTTTGCCAATGAGATTTTTTGACTCGTCCTCTCAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGAAACCACTTCTTCAATCCGTAG

Coding sequence (CDS)

ATGAATGACTTGATGACTACCATGAATTTGGCTACTGTTTGGGCCACCTCATTACTTATTGTGCTTCTGCATCTTCTTCTTCTTCTCTCCGCCTCTTCTCCACCCAGAGGTATGTTTTTTGAAGACAAAACCAGGCTTGGATCCACCCCACCAAGCTGCCATAACAAGTGCAACGAGTGCCACCCATGCATGGCTGTGCAAGTGCCTAGCATGCCCGGCCGCGCCAGCCGGTTGGACTCACCTTCGGCTTTGCCAATGAGATTTTTTGACTCGTCCTCTCAAGGGAACAGATACTCATTTTACAAGCCATTGGGTTGGAAATGCCGCTGTGGAAACCACTTCTTCAATCCGTAG

Homology

[Close]

BLAST of CSPI06G30130 vs. Swiss-Prot
Match: EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.7e-20
Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 1


Query: 13  VWATSLLIVLLHLLLLLSASSP-----------PRGMFFEDKTRLGSTPPSCHNKCNECH 72
           ++ ++LL++ L L+LL++               P+    EDK RLGSTPPSCHN+CN CH
Sbjct: 4   IYKSTLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCH 63

Query: 73  PCMAVQVPSMPGRA--SRLDSPSALPMRFFDS-SSQGNRYSFYKPLGWKCRCGNHFFNP 118
           PCMA+QVP++P R+  +R++  S   +R   S ++  ++YS YKP+GWKC C  HF+NP
Sbjct: 64  PCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CSPI06G30130 vs. Swiss-Prot
Match: EPFL4_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-07
Identity = 25/71 (35.21%), Postives = 33/71 (46.48%), Query Frame = 1


Query: 47  GSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGW 106
           GS+PP+C +KC +C PC  V VP  PG +  L+                     Y P  W
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLE---------------------YYPEAW 109

Query: 107 KCRCGNHFFNP 118
           +C+CGN  F P
Sbjct: 120 RCKCGNKLFMP 109

[Close]

BLAST of CSPI06G30130 vs. Swiss-Prot
Match: EPFL2_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-06
Identity = 39/129 (30.23%), Postives = 61/129 (47.29%), Query Frame = 1


Query: 13  VWAT---SLLIVLL-----HLLLLLSASSPPRGMFFED----------KTRLGSTPPSCH 72
           VW++   S L++LL     H  L+ +    P  + F            +  +GS PP C 
Sbjct: 2   VWSSNMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCE 61

Query: 73  N-KCNECHPCMAVQVPSMPGRASRLDSP-----SALPMRFFDSSSQGNRYSFYKPLGWKC 118
             +C  C  C A+QVP+ P   ++L SP     S+         ++G+  + YKP+ WKC
Sbjct: 62  RVRCRSCGHCEAIQVPTNP--QTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKC 121

[Close]

BLAST of CSPI06G30130 vs. Swiss-Prot
Match: EPFL6_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.9e-06
Identity = 24/72 (33.33%), Postives = 30/72 (41.67%), Query Frame = 1


Query: 46  LGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLG 105
           LGS+PP C +KC  C PC  V VP  PG     +                     Y P  
Sbjct: 106 LGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAE---------------------YYPEA 156

Query: 106 WKCRCGNHFFNP 118
           W+C+CGN  + P
Sbjct: 166 WRCKCGNKLYMP 156

[Close]

BLAST of CSPI06G30130 vs. TrEMBL
Match: A0A0A0KGR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499820 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-62
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNEC 60
           MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNEC
Sbjct: 1   MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNEC 60

Query: 61  HPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 118
           HPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 61  HPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CSPI06G30130 vs. TrEMBL
Match: F6HJL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0391g00030 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-28
Identity = 66/123 (53.66%), Postives = 86/123 (69.92%), Query Frame = 1


Query: 5   MTTMNLATVWATSLLIVLLHLLLLLSA-------SSPPRGMFFEDKTRLGSTPPSCHNKC 64
           M ++    ++  +++  +LHLLL  ++       S   RG+ FE+KTRLGSTPPSCHNKC
Sbjct: 1   MNSLGSYLLYTITVVTAVLHLLLSPASCFSQQQGSDSTRGLLFEEKTRLGSTPPSCHNKC 60

Query: 65  NECHPCMAVQVPSMPGRAS-RLDSPSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHF 118
           NECHPCMAVQVP++P  +  RL   + +PM FF+S  S+  NRYS YKPLGWKC CG+HF
Sbjct: 61  NECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPSTAANRYSNYKPLGWKCHCGDHF 120

[Close]

BLAST of CSPI06G30130 vs. TrEMBL
Match: V7CQQ4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G257600g PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.7e-27
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 1


Query: 16  TSLLIVLL--HLLLLLSASSPP------RGMFFEDKTRLGSTPPSCHNKCNECHPCMAVQ 75
           TSLLIVL+  + L L+SAS+ P      R + FE+K RLGS PPSCHNKCN+CHPCMAVQ
Sbjct: 13  TSLLIVLVLHNFLSLVSASNHPHTSISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 76  VPSMPGRASR---LDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 118
           VP++P   S    L   SA+      SS QGNRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMASFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

[Close]

BLAST of CSPI06G30130 vs. TrEMBL
Match: A0A0L9TJC9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g028300 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.4e-27
Identity = 70/114 (61.40%), Postives = 80/114 (70.18%), Query Frame = 1


Query: 16  TSLLIVLL--HLLLLLSASS------PPRGMFFEDKTRLGSTPPSCHNKCNECHPCMAVQ 75
           TSLLIVLL  + L L+SAS+       PR + FE+K RLGS PPSCHNKCN+CHPCMAVQ
Sbjct: 13  TSLLIVLLLHNFLSLVSASNHPRTAISPRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 76  VPSMPGRASR---LDSPSALPMRFFDSSSQG-NRYSFYKPLGWKCRCGNHFFNP 118
           VP++P   S    L   SA+   F  SS QG NRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMATFFNPSSPQGNNRYSNYKPLGWKCHCGDHFFNP 126

[Close]

BLAST of CSPI06G30130 vs. TrEMBL
Match: C6SZ30_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G134100 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.1e-26
Identity = 67/115 (58.26%), Postives = 77/115 (66.96%), Query Frame = 1


Query: 16  TSLLIVLL----HLLLLLSASSPP------RGMFFEDKTRLGSTPPSCHNKCNECHPCMA 75
           TSLLI+LL      L L SAS+ P      R + FE+K RLGS PPSCHNKCN+CHPCMA
Sbjct: 13  TSLLIILLLHNLFSLSLASASNHPQPAISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMA 72

Query: 76  VQVPSMPGRASR---LDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 118
           VQVP++P   S    L   +A+      SS QGNRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VQVPTLPSHDSNPPDLTKTAAMATFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 127

[Close]

BLAST of CSPI06G30130 vs. TAIR10
Match: AT5G10310.1 (AT5G10310.1 unknown protein)

HSP 1 Score: 99.0 bits (245), Expect = 2.1e-21
Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 1


Query: 13  VWATSLLIVLLHLLLLLSASSP-----------PRGMFFEDKTRLGSTPPSCHNKCNECH 72
           ++ ++LL++ L L+LL++               P+    EDK RLGSTPPSCHN+CN CH
Sbjct: 4   IYKSTLLLLPLILILLITPQVSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCH 63

Query: 73  PCMAVQVPSMPGRA--SRLDSPSALPMRFFDS-SSQGNRYSFYKPLGWKCRCGNHFFNP 118
           PCMA+QVP++P R+  +R++  S   +R   S ++  ++YS YKP+GWKC C  HF+NP
Sbjct: 64  PCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of CSPI06G30130 vs. TAIR10
Match: AT4G14723.1 (AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1))

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 25/71 (35.21%), Postives = 33/71 (46.48%), Query Frame = 1


Query: 47  GSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGW 106
           GS+PP+C +KC +C PC  V VP  PG +  L+                     Y P  W
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLE---------------------YYPEAW 109

Query: 107 KCRCGNHFFNP 118
           +C+CGN  F P
Sbjct: 120 RCKCGNKLFMP 109

[Close]

BLAST of CSPI06G30130 vs. TAIR10
Match: AT4G37810.1 (AT4G37810.1 unknown protein)

HSP 1 Score: 54.3 bits (129), Expect = 5.9e-08
Identity = 39/129 (30.23%), Postives = 61/129 (47.29%), Query Frame = 1


Query: 13  VWAT---SLLIVLL-----HLLLLLSASSPPRGMFFED----------KTRLGSTPPSCH 72
           VW++   S L++LL     H  L+ +    P  + F            +  +GS PP C 
Sbjct: 2   VWSSNMSSFLLILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLIGSRPPRCE 61

Query: 73  N-KCNECHPCMAVQVPSMPGRASRLDSP-----SALPMRFFDSSSQGNRYSFYKPLGWKC 118
             +C  C  C A+QVP+ P   ++L SP     S+         ++G+  + YKP+ WKC
Sbjct: 62  RVRCRSCGHCEAIQVPTNP--QTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKC 121

[Close]

BLAST of CSPI06G30130 vs. TAIR10
Match: AT2G30370.1 (AT2G30370.1 allergen-related)

HSP 1 Score: 51.2 bits (121), Expect = 5.0e-07
Identity = 24/72 (33.33%), Postives = 30/72 (41.67%), Query Frame = 1


Query: 46  LGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLG 105
           LGS+PP C +KC  C PC  V VP  PG     +                     Y P  
Sbjct: 180 LGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAE---------------------YYPEA 230

Query: 106 WKCRCGNHFFNP 118
           W+C+CGN  + P
Sbjct: 240 WRCKCGNKLYMP 230

[Close]

BLAST of CSPI06G30130 vs. TAIR10
Match: AT3G13898.1 (AT3G13898.1 unknown protein)

HSP 1 Score: 50.8 bits (120), Expect = 6.5e-07
Identity = 24/68 (35.29%), Postives = 34/68 (50.00%), Query Frame = 1


Query: 43  KTRLGSTPPSCHNKCNECHPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYK 102
           + R+GS PPSC  KC  C PC A+Q P++          S++P            Y+ Y+
Sbjct: 54  RRRIGSKPPSCEKKCYGCEPCEAIQFPTI----------SSIP-------HLSPHYANYQ 104

Query: 103 PLGWKCRC 111
           P GW+C C
Sbjct: 114 PEGWRCHC 104

[Close]

BLAST of CSPI06G30130 vs. NCBI nr
Match: gi|700193534|gb|KGN48738.1| (hypothetical protein Csa_6G499820 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 3.0e-62
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 1   MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNEC 60
           MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNEC
Sbjct: 1   MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNEC 60

Query: 61  HPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 118
           HPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 61  HPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 117

[Close]

BLAST of CSPI06G30130 vs. NCBI nr
Match: gi|659080050|ref|XP_008440584.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo])

HSP 1 Score: 241.5 bits (615), Expect = 7.4e-61
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 1


Query: 1   MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGMFFEDKTRLGSTPPSCHNKCNEC 60
           MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRG+FFEDKTRLGSTPPSCHNKCNEC
Sbjct: 18  MNDLMTTMNLATVWATSLLIVLLHLLLLLSASSPPRGIFFEDKTRLGSTPPSCHNKCNEC 77

Query: 61  HPCMAVQVPSMPGRASRLDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 118
           HPCMAVQVPSMPGRASRLDS SALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP
Sbjct: 78  HPCMAVQVPSMPGRASRLDSSSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 134

[Close]

BLAST of CSPI06G30130 vs. NCBI nr
Match: gi|731438809|ref|XP_010646934.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera])

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-28
Identity = 66/123 (53.66%), Postives = 86/123 (69.92%), Query Frame = 1


Query: 5   MTTMNLATVWATSLLIVLLHLLLLLSA-------SSPPRGMFFEDKTRLGSTPPSCHNKC 64
           M ++    ++  +++  +LHLLL  ++       S   RG+ FE+KTRLGSTPPSCHNKC
Sbjct: 1   MNSLGSYLLYTITVVTAVLHLLLSPASCFSQQQGSDSTRGLLFEEKTRLGSTPPSCHNKC 60

Query: 65  NECHPCMAVQVPSMPGRAS-RLDSPSALPMRFFDS--SSQGNRYSFYKPLGWKCRCGNHF 118
           NECHPCMAVQVP++P  +  RL   + +PM FF+S  S+  NRYS YKPLGWKC CG+HF
Sbjct: 61  NECHPCMAVQVPTLPSHSGPRLGLTATVPMEFFESSPSTAANRYSNYKPLGWKCHCGDHF 120

[Close]

BLAST of CSPI06G30130 vs. NCBI nr
Match: gi|951005401|ref|XP_014508135.1| (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vigna radiata var. radiata])

HSP 1 Score: 132.9 bits (333), Expect = 3.7e-28
Identity = 70/113 (61.95%), Postives = 80/113 (70.80%), Query Frame = 1


Query: 16  TSLLIVLL--HLLLLLSASS------PPRGMFFEDKTRLGSTPPSCHNKCNECHPCMAVQ 75
           TSLLIVLL  + L L+SAS+       PR + FE+K RLGS PPSCHNKCN+CHPCMAVQ
Sbjct: 13  TSLLIVLLLHNFLSLVSASNHPHTAISPRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 76  VPSMPGRASR---LDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 118
           VP++P   S    L   SA+   F  SS QGNRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMATFFNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

[Close]

BLAST of CSPI06G30130 vs. NCBI nr
Match: gi|593793270|ref|XP_007159674.1| (hypothetical protein PHAVU_002G257600g [Phaseolus vulgaris])

HSP 1 Score: 129.0 bits (323), Expect = 5.4e-27
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 1


Query: 16  TSLLIVLL--HLLLLLSASSPP------RGMFFEDKTRLGSTPPSCHNKCNECHPCMAVQ 75
           TSLLIVL+  + L L+SAS+ P      R + FE+K RLGS PPSCHNKCN+CHPCMAVQ
Sbjct: 13  TSLLIVLVLHNFLSLVSASNHPHTSISTRELLFEEKNRLGSIPPSCHNKCNDCHPCMAVQ 72

Query: 76  VPSMPGRASR---LDSPSALPMRFFDSSSQGNRYSFYKPLGWKCRCGNHFFNP 118
           VP++P   S    L   SA+      SS QGNRYS YKPLGWKC CG+HFFNP
Sbjct: 73  VPTLPSHDSNPPDLTKTSAMASFLNPSSPQGNRYSNYKPLGWKCHCGDHFFNP 125

The following BLAST results are available for this feature:

BLAST of CSPI06G30130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EPFL1_ARATH	3.7e-20	43.70	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=1...	[more]
EPFL4_ARATH	2.8e-07	35.21	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1...	[more]
EPFL2_ARATH	1.0e-06	30.23	EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2...	[more]
EPFL6_ARATH	8.9e-06	33.33	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana GN=EPFL6 PE=1...	[more]

BLAST of CSPI06G30130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGR1_CUCSA	2.1e-62	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499820 PE=4 SV=1	[more]
F6HJL0_VITVI	1.5e-28	53.66	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0391g00030 PE=4 SV=...	[more]
V7CQQ4_PHAVU	3.7e-27	60.18	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G257600g PE=4 SV=1	[more]
A0A0L9TJC9_PHAAN	6.4e-27	61.40	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g028300 PE=4 SV=1	[more]
C6SZ30_SOYBN	4.1e-26	58.26	Uncharacterized protein OS=Glycine max GN=GLYMA_08G134100 PE=2 SV=1	[more]

BLAST of CSPI06G30130 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10310.1	2.1e-21	43.70	unknown protein	[more]
AT4G14723.1	1.6e-08	35.21	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:A...	[more]
AT4G37810.1	5.9e-08	30.23	unknown protein	[more]
AT2G30370.1	5.0e-07	33.33	allergen-related	[more]
AT3G13898.1	6.5e-07	35.29	unknown protein	[more]

BLAST of CSPI06G30130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700193534\|gb\|KGN48738.1\|	3.0e-62	100.00	hypothetical protein Csa_6G499820 [Cucumis sativus]	[more]
gi\|659080050\|ref\|XP_008440584.1\|	7.4e-61	98.29	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Cucumis melo]	[more]
gi\|731438809\|ref\|XP_010646934.1\|	2.2e-28	53.66	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vitis vinifera]	[more]
gi\|951005401\|ref\|XP_014508135.1\|	3.7e-28	61.95	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Vigna radiata var. radiat...	[more]
gi\|593793270\|ref\|XP_007159674.1\|	5.4e-27	60.18	hypothetical protein PHAVU_002G257600g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G30130.1	CSPI06G30130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33109	FAMILY NOT NAMED	coord: 18..72 score: 4.9E-40coord: 92..117 score: 4.9
None	No IPR available	PANTHER	PTHR33109:SF3	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 1	coord: 18..72 score: 4.9E-40coord: 92..117 score: 4.9
None	No IPR available	PFAM	PF17181	EPF	coord: 45..117 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G30130	Cla014135	Watermelon (97103) v1	cpiwmB519
CSPI06G30130	Csa6G499820	Cucumber (Chinese Long) v2	cpicuB313
CSPI06G30130	MELO3C007746	Melon (DHL92) v3.5.1	cpimeB508
CSPI06G30130	ClCG01G018670	Watermelon (Charleston Gray)	cpiwcgB453
CSPI06G30130	Lsi01G007810	Bottle gourd (USVL1VR-Ls)	cpilsiB439
CSPI06G30130	MELO3C007746.2	Melon (DHL92) v3.6.1	cpimedB493
CSPI06G30130	CsaV3_6G045330	Cucumber (Chinese Long) v3	cpicucB363
CSPI06G30130	Cla97C01G018060	Watermelon (97103) v2	cpiwmbB433
CSPI06G30130	Bhi03G000893	Wax gourd	cpiwgoB627
CSPI06G30130	Cucsa.104290	Cucumber (Gy14) v1	cgycpiB122
CSPI06G30130	CmaCh07G005490	Cucurbita maxima (Rimu)	cmacpiB893
CSPI06G30130	CmaCh03G008110	Cucurbita maxima (Rimu)	cmacpiB689
CSPI06G30130	CmoCh03G008570	Cucurbita moschata (Rifu)	cmocpiB681
CSPI06G30130	CmoCh07G005530	Cucurbita moschata (Rifu)	cmocpiB873
CSPI06G30130	CsGy6G029600	Cucumber (Gy14) v2	cgybcpiB287
CSPI06G30130	Carg00704	Silver-seed gourd	carcpiB0446

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G30130	Melon (DHL92) v3.6.1	cpimedB462
CSPI06G30130	Melon (DHL92) v3.6.1	cpimedB471
CSPI06G30130	Cucumber (Gy14) v2	cgybcpiB082
CSPI06G30130	Silver-seed gourd	carcpiB0067
CSPI06G30130	Silver-seed gourd	carcpiB0682
CSPI06G30130	Silver-seed gourd	carcpiB0794
CSPI06G30130	Silver-seed gourd	carcpiB0982
CSPI06G30130	Cucumber (Chinese Long) v3	cpicucB328
CSPI06G30130	Watermelon (97103) v2	cpiwmbB448
CSPI06G30130	Watermelon (97103) v2	cpiwmbB528
CSPI06G30130	Wax gourd	cpiwgoB598
CSPI06G30130	Wax gourd	cpiwgoB654
CSPI06G30130	Wild cucumber (PI 183967)	cpicpiB085
CSPI06G30130	Wild cucumber (PI 183967)	cpicpiB136
CSPI06G30130	Cucumber (Gy14) v1	cgycpiB248
CSPI06G30130	Cucumber (Gy14) v1	cgycpiB476
CSPI06G30130	Cucurbita maxima (Rimu)	cmacpiB202
CSPI06G30130	Cucurbita maxima (Rimu)	cmacpiB785
CSPI06G30130	Cucurbita maxima (Rimu)	cmacpiB821
CSPI06G30130	Cucurbita moschata (Rifu)	cmocpiB188
CSPI06G30130	Cucurbita moschata (Rifu)	cmocpiB775
CSPI06G30130	Cucurbita moschata (Rifu)	cmocpiB804
CSPI06G30130	Cucumber (Chinese Long) v2	cpicuB278
CSPI06G30130	Melon (DHL92) v3.5.1	cpimeB471
CSPI06G30130	Melon (DHL92) v3.5.1	cpimeB483
CSPI06G30130	Watermelon (Charleston Gray)	cpiwcgB451
CSPI06G30130	Watermelon (Charleston Gray)	cpiwcgB538
CSPI06G30130	Watermelon (97103) v1	cpiwmB487
CSPI06G30130	Watermelon (97103) v1	cpiwmB554
CSPI06G30130	Cucurbita pepo (Zucchini)	cpecpiB080
CSPI06G30130	Cucurbita pepo (Zucchini)	cpecpiB121
CSPI06G30130	Cucurbita pepo (Zucchini)	cpecpiB232
CSPI06G30130	Cucurbita pepo (Zucchini)	cpecpiB468
CSPI06G30130	Cucurbita pepo (Zucchini)	cpecpiB503
CSPI06G30130	Cucurbita pepo (Zucchini)	cpecpiB848
CSPI06G30130	Bottle gourd (USVL1VR-Ls)	cpilsiB462
CSPI06G30130	Bottle gourd (USVL1VR-Ls)	cpilsiB492