CSPI06G28120 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAATTGATTTTATTTATAAGAAAAGTTGATTGGGCCATCAAATAAGCATTTTGTTGTGAAAGAAAAGGGAATTGTGATGTTCTTTTACTTTTGAGGGAAAAATGAAGAAACAAACTTGGGAAAAAAGAGAGAACGGCGACAGGTCAGCATGACGAGGACCAACCAAAGTTGAAGTCTTTACCTCTGGCCCACCTCCACCATCACCACCACCACCGCCTCCACGCTCCCCTATATTCCTCTTTCTCCTCTATTTCATTAACCAATTCCCCCCCTTTACCCATATCGATTCCAATCCCTCTCCCCGGCGAGGTCTCCGGACCCCCGGCGGTACACCACATGTCGGATTCCGCCGACCATCGCCTTCCGCCTCCCCCCTTAACTCGCCCTTTCCCGCTCTACAAGCAGCACTCCTGGTCGCCCGATGCCGACCGTGACCAAGCCTGGCTTCGCCGCAAAACCCAAAGCAAGATGCGACGGAGCAAGAGCGTGACCGACGATGACCTCGAAGAACTTAAAGCCTGCCTTGAATTGGGTTTTGGATTCAACTCACCGGAGGTGGACCCTCGACTCTGTGAAACTTTTCCAGCGTTGGGATTTTACCACGCCGTCAACAAGCAGTACAATCGTACTCTTTCCAACTCTTCGGCGTCTCTCTGCTCTTCCCCTGTTTCTGAATCTGTTTCTCCCTCTGCCGACAGTAGCCCCGCCGCCATAATCAGCCACGGTATGTTAATTTTCTAACAAACCCCTTTCTGAAATTGAATAGTGAATCTTGTTTTTAATTTTGATTTATGTGTTTGGACGTCGGGAAATTCCAAACTGGGTTTTCAGGGGAGAATCCGCAGATGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTGGTTGCTTGTTCAGTACGGCAGTATTGATTCTTGCTAATCAATTTCATCACTAAATTTGTGTTGGGTTTTTTTTCGTTTTCCTTCTCAGACTTCCGTTTCTGACTTGACTACAAATTCTAATCAACACATACACATTTAATCCTCAATTTCCCAAATTTTCTTCTACTTTCTTGTTTTTCTTGAATTCTCTGTTTCCGAAATTCTGGTTGGCAAATCGACTTCAAAGTTATTTAATTTTAAATTATAATCAGCGAACACAAGGAAAGTTGGAAGAACAAGGAGGCAACTGGGTCTATCTTTCGCTTCCACACGTATCCTTTTCATATTATCTCAAGAAATTTTTGGTTTCTGAAATCATGATGGAAACGAAAGGGGATTCTGAATTTGAAGATGACAAGTTTGGCGTGTACACAACGACGACAGTAAATTGATAGTTTTTTTTTCCCTTTCTTCACGATTTACTGATATTTTTAAAATTGCATAATGAATAAATAAAAGTATTTCCAAAATCAAATTCATTTATTTCTGAAATTTGTGTGTGACCAAATTATGTGCCGTGTATGCATAATAATTGTACGTTGAACAATGACACAGTTATTACTATATCTATTTTGCTCACATTGATAAGTAGAGTGTAGATTATTGTAAGAAGAAGACAATGAGGAGACTTTGATAATTTGTAGTATTTGATTAGTTTAATTACATGTCAGTTTTCTTGTGTTAAGACAAATAATATTATATTTATGGTGGAG ATGTCGGATTCCGCCGACCATCGCCTTCCGCCTCCCCCCTTAACTCGCCCTTTCCCGCTCTACAAGCAGCACTCCTGGTCGCCCGATGCCGACCGTGACCAAGCCTGGCTTCGCCGCAAAACCCAAAGCAAGATGCGACGGAGCAAGAGCGTGACCGACGATGACCTCGAAGAACTTAAAGCCTGCCTTGAATTGGGTTTTGGATTCAACTCACCGGAGGTGGACCCTCGACTCTGTGAAACTTTTCCAGCGTTGGGATTTTACCACGCCGTCAACAAGCAGTACAATCGTACTCTTTCCAACTCTTCGGCGTCTCTCTGCTCTTCCCCTGTTTCTGAATCTGTTTCTCCCTCTGCCGACAGTAGCCCCGCCGCCATAATCAGCCACGGGGAGAATCCGCAGATGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTGGTTGCTTGTTCAGTACGGCAGTATTGA ATGTCGGATTCCGCCGACCATCGCCTTCCGCCTCCCCCCTTAACTCGCCCTTTCCCGCTCTACAAGCAGCACTCCTGGTCGCCCGATGCCGACCGTGACCAAGCCTGGCTTCGCCGCAAAACCCAAAGCAAGATGCGACGGAGCAAGAGCGTGACCGACGATGACCTCGAAGAACTTAAAGCCTGCCTTGAATTGGGTTTTGGATTCAACTCACCGGAGGTGGACCCTCGACTCTGTGAAACTTTTCCAGCGTTGGGATTTTACCACGCCGTCAACAAGCAGTACAATCGTACTCTTTCCAACTCTTCGGCGTCTCTCTGCTCTTCCCCTGTTTCTGAATCTGTTTCTCCCTCTGCCGACAGTAGCCCCGCCGCCATAATCAGCCACGGGGAGAATCCGCAGATGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTGGTTGCTTGTTCAGTACGGCAGTATTGA
BLAST of CSPI06G28120 vs. TrEMBL
Match: A0A0A0KIC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490880 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.8e-82 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of CSPI06G28120 vs. TrEMBL
Match: A0A067K6R1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12392 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.3e-43 Identity = 97/149 (65.10%), Postives = 115/149 (77.18%), Query Frame = 1
BLAST of CSPI06G28120 vs. TrEMBL
Match: A0A0D2VKX9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G105800 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.2e-41 Identity = 94/145 (64.83%), Postives = 107/145 (73.79%), Query Frame = 1
BLAST of CSPI06G28120 vs. TrEMBL
Match: A0A0D2TZ50_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G075900 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.7e-41 Identity = 93/153 (60.78%), Postives = 113/153 (73.86%), Query Frame = 1
BLAST of CSPI06G28120 vs. TrEMBL
Match: B9SC60_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407950 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 6.0e-41 Identity = 95/153 (62.09%), Postives = 110/153 (71.90%), Query Frame = 1
BLAST of CSPI06G28120 vs. TAIR10
Match: AT4G33985.1 (AT4G33985.1 Protein of unknown function (DUF1685)) HSP 1 Score: 156.8 bits (395), Expect = 1.1e-38 Identity = 84/143 (58.74%), Postives = 107/143 (74.83%), Query Frame = 1
BLAST of CSPI06G28120 vs. TAIR10
Match: AT2G15590.2 (AT2G15590.2 Protein of unknown function (DUF1685)) HSP 1 Score: 122.5 bits (306), Expect = 2.3e-28 Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 1
BLAST of CSPI06G28120 vs. TAIR10
Match: AT3G50350.1 (AT3G50350.1 Protein of unknown function (DUF1685)) HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22 Identity = 60/112 (53.57%), Postives = 71/112 (63.39%), Query Frame = 1
BLAST of CSPI06G28120 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685)) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20 Identity = 66/146 (45.21%), Postives = 82/146 (56.16%), Query Frame = 1
BLAST of CSPI06G28120 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685)) HSP 1 Score: 92.8 bits (229), Expect = 2.0e-19 Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 1
BLAST of CSPI06G28120 vs. NCBI nr
Match: gi|449448322|ref|XP_004141915.1| (PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus]) HSP 1 Score: 313.2 bits (801), Expect = 2.6e-82 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of CSPI06G28120 vs. NCBI nr
Match: gi|659133805|ref|XP_008466904.1| (PREDICTED: uncharacterized protein LOC103504252 [Cucumis melo]) HSP 1 Score: 256.1 bits (653), Expect = 3.8e-65 Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 1
BLAST of CSPI06G28120 vs. NCBI nr
Match: gi|643722052|gb|KDP31931.1| (hypothetical protein JCGZ_12392 [Jatropha curcas]) HSP 1 Score: 184.1 bits (466), Expect = 1.8e-43 Identity = 97/149 (65.10%), Postives = 115/149 (77.18%), Query Frame = 1
BLAST of CSPI06G28120 vs. NCBI nr
Match: gi|823249415|ref|XP_012457342.1| (PREDICTED: uncharacterized protein LOC105778225 [Gossypium raimondii]) HSP 1 Score: 177.6 bits (449), Expect = 1.7e-41 Identity = 94/145 (64.83%), Postives = 107/145 (73.79%), Query Frame = 1
BLAST of CSPI06G28120 vs. NCBI nr
Match: gi|823206242|ref|XP_012437038.1| (PREDICTED: uncharacterized protein LOC105763363 [Gossypium raimondii]) HSP 1 Score: 176.4 bits (446), Expect = 3.8e-41 Identity = 93/153 (60.78%), Postives = 113/153 (73.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|