Lsi10G005470 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G005470
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Membrane insertase YidC
Location	chr10 : 7855991 .. 7857917 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTATTAACGGAAAAAAAGAAAAATCCAAAAAAAAAAAAAAGCCATAGAGCCCTCCGGCAAGGTCACCGGCCATCCGGCCATCCCCAACGGCGGGGCTGTGTCGGGTGTCCCATCAAAACCCACATCCACCATGTCGGAACACTACGCGCCGCCGCCGCCACCGCCGCAAAAGGCGGGGTTGATTCCGACGGGTCTGTACAAGCAGAGATCTTGGTCGCCGGACGCGTCGAGGGAGGAGGCGTGGCAGCGGCGGAAGGGGAGGAGCAAGAAAGAGCGGAACCAGAGTGTGACGGCGGAGGATCTTGAGGAATTGAAGGCCTGTCTGGAGTTGGGTTTCGGATTCGAGTCGCCGGAGCTGGACAGCCGGCTTTCCAATACGTTGCCGGCTTTAGGACTGTATCACGCCGTGAATAAAAACTACAGCGATTCTATCTCCAAGTCTTCTAATACGACGGCGTTTTCATCCCCTGATCGCGATTCCCTCAACTCTCCTTCTCCTCTCGGCAGCCCTCTCGCCATTTTTGGTTCCTCTGGTATTCAATTCTTTCCCTCAATTTCCCTTTTTTTTTTTTCCATTTTTTTTCCATTTTTTTTACTTTATATTATATATTTTAGCTTATAACTGTGGTTTGATTACTTCTCAATTTTGTCTCATGAATGCCTACATTTTAAAAAATATCTAAAAAAAAGGTTTCGTCAATTGCAAAAATTGAGTTATCAAACTTATATAAGAGTTAAAATTAGACTCTTAAACTTAAATAATTGTAAAAATTACAACCAATAAATAAATTTGTGGGTTCAATATCATTTGAAGGTCTAATTTCTTGTAAGTTTGAGTATCTAATTTTAATAGTTGTATAAGTTTGAGGGCTTAATTTTTACAATTGAAAGTTTAAGGCTATAATTGCAACTACTATCATATTTCAGGGGTAATTTTTACAATTTTACCTTAAATTTTTAATTTTGTGTTTAATAGATCTTAGGTATTGAATTTTTTATAGAACATTAAATAATCTTATTACACATTTGCATTTTATAAAAGTTAGAATAGGTCAAAAGATGTATGGGAACATAATTGAATGACCAATTGAATGAGTCTTGGACAAAAAAAAATTGAATGTCTAAAGACTTATTAGATGTTTTTTAGGTTTAAATACTATGGTATATGTACTTTCAACTTTGGTTCATTTTAGTCCGTATACATTAAGATATCCATTTTGCTTTCTTTATTTTTAAAAAGTGATCATTATGACCTCTTCATTTTCATTTCCATTTTATTTTTAAGGAGATCAAAATGACTACTTTTTAAAAGTACAAGACTAAAATGAACTAAAGTTGAAAATATAAACACCAAAATGAACCGAAATGGAAAGTACATGAACCAAAGTAGTCTTACTTAAACATACTTCTTAAAGTTCAATATCAAATAAATACAAACCTAAAAATACAAAAATCTACTCAACATTTTAAACTTTAGAGAACCAAACAAATATGACTTCAAAGATTTAACGACTAAACTTATAATTCAACTAAGATTTTAAGTGTAATTATACAACTATGGGTGTGTGTTTTTAAGTTATCTATAAACTCATGGAGTTACTTACAAGAACCTTCATAGGAAAAAGTTAAAAGGCAAGTAGTAATAGCAAAAGAATAGTAATTAATGGACGACAATTTTGAAGTTTTGTATAAACATATGTGGAATTACTTGTTTATTTGGATGGTTAATTGTTTTTTTTTTTTTTTTTTCTTGTAACCTAATAATAGGGGAAAATCCAAAGACGGTGAAGACAAAGCTGAGACAGTGGGCTCAAGTGGTTGCTTGTTCGGTGAAGAACTCCTCAACCTAAATAATAAATATCTTTAATTATTAACCACCATGGTTAATCTAAACTAAACCATAGTTTCAAATTTGCAAATGGGC

mRNA sequence

CTCTTATTAACGGAAAAAAAGAAAAATCCAAAAAAAAAAAAAAGCCATAGAGCCCTCCGGCAAGGTCACCGGCCATCCGGCCATCCCCAACGGCGGGGCTGTGTCGGGTGTCCCATCAAAACCCACATCCACCATGTCGGAACACTACGCGCCGCCGCCGCCACCGCCGCAAAAGGCGGGGTTGATTCCGACGGGTCTGTACAAGCAGAGATCTTGGTCGCCGGACGCGTCGAGGGAGGAGGCGTGGCAGCGGCGGAAGGGGAGGAGCAAGAAAGAGCGGAACCAGAGTGTGACGGCGGAGGATCTTGAGGAATTGAAGGCCTGTCTGGAGTTGGGTTTCGGATTCGAGTCGCCGGAGCTGGACAGCCGGCTTTCCAATACGTTGCCGGCTTTAGGACTGTATCACGCCGTGAATAAAAACTACAGCGATTCTATCTCCAAGTCTTCTAATACGACGGCGTTTTCATCCCCTGATCGCGATTCCCTCAACTCTCCTTCTCCTCTCGGCAGCCCTCTCGCCATTTTTGGTTCCTCTGGGGAAAATCCAAAGACGGTGAAGACAAAGCTGAGACAGTGGGCTCAAGTGGTTGCTTGTTCGGTGAAGAACTCCTCAACCTAAATAATAAATATCTTTAATTATTAACCACCATGGTTAATCTAAACTAAACCATAGTTTCAAATTTGCAAATGGGC

Coding sequence (CDS)

ATGTCGGAACACTACGCGCCGCCGCCGCCACCGCCGCAAAAGGCGGGGTTGATTCCGACGGGTCTGTACAAGCAGAGATCTTGGTCGCCGGACGCGTCGAGGGAGGAGGCGTGGCAGCGGCGGAAGGGGAGGAGCAAGAAAGAGCGGAACCAGAGTGTGACGGCGGAGGATCTTGAGGAATTGAAGGCCTGTCTGGAGTTGGGTTTCGGATTCGAGTCGCCGGAGCTGGACAGCCGGCTTTCCAATACGTTGCCGGCTTTAGGACTGTATCACGCCGTGAATAAAAACTACAGCGATTCTATCTCCAAGTCTTCTAATACGACGGCGTTTTCATCCCCTGATCGCGATTCCCTCAACTCTCCTTCTCCTCTCGGCAGCCCTCTCGCCATTTTTGGTTCCTCTGGGGAAAATCCAAAGACGGTGAAGACAAAGCTGAGACAGTGGGCTCAAGTGGTTGCTTGTTCGGTGAAGAACTCCTCAACCTAA

Protein sequence

MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST

Homology

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BLAST of Lsi10G005470 vs. TrEMBL
Match: A0A0A0LJJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277000 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-70
Identity = 144/162 (88.89%), Postives = 151/162 (93.21%), Query Frame = 1


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQR-RKGRSKKERNQSVTAEDLE 60
           +SE Y PPPPP  KA LIPT LY+Q SWSPDASREEAWQR RKGRSKKERN+S+TAEDLE
Sbjct: 12  VSEPYTPPPPPG-KAELIPTALYRQGSWSPDASREEAWQRRRKGRSKKERNRSLTAEDLE 71

Query: 61  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLN 120
           ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNK+YSDSISKS+N TAFSSPDRD +N
Sbjct: 72  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKSYSDSISKSANRTAFSSPDRDYIN 131

Query: 121 SPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           SPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Sbjct: 132 SPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 172

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BLAST of Lsi10G005470 vs. TrEMBL
Match: B9SC60_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407950 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 8.4e-46
Identity = 103/162 (63.58%), Postives = 123/162 (75.93%), Query Frame = 1


Query: 5   YAPPPPPPQKAG----LIPT-GLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLE 64
           Y PPPPPP +A     L P+  LYKQ SWSPD  R+EAW RRKG SKK++++SVT ED++
Sbjct: 137 YQPPPPPPPRAAQHKLLAPSLPLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVD 196

Query: 65  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLN 124
           ELKAC+ELGFGF+SPE+D RLS+TLPALGLYHAVNK+Y D         A SS      +
Sbjct: 197 ELKACIELGFGFDSPEMDQRLSDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCD 256

Query: 125 SPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           SPSPLGSP AIFG  G+NP+TVKT+LRQWAQVVACSV+  S+
Sbjct: 257 SPSPLGSPHAIFG-PGDNPQTVKTRLRQWAQVVACSVRQCSS 297

[Close]

BLAST of Lsi10G005470 vs. TrEMBL
Match: A0A067K6R1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12392 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 101/166 (60.84%), Postives = 123/166 (74.10%), Query Frame = 1


Query: 1   MSEHYAPPPPP-----PQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTA 60
           +  H  P PPP     P      P+ LYKQ SWSPD  R+EAW +RKG  K  R++SVT 
Sbjct: 4   LQPHQPPLPPPQHQQQPPPLAQPPSSLYKQHSWSPDIYRDEAWLKRKGNCKNRRSKSVTD 63

Query: 61  EDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDR 120
           EDL+ELKAC+ELGFGF+SPE+D RLS+TLPALGLY+AVNK+Y DS+SKS+  T+ SS   
Sbjct: 64  EDLDELKACIELGFGFDSPEVDKRLSDTLPALGLYYAVNKHYYDSVSKSATATSSSSTAS 123

Query: 121 DSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           D  +SPSPLGSP AI G  G+NP+ VKT+LRQWAQVVACSV+  S+
Sbjct: 124 D-CDSPSPLGSPHAILG-PGDNPQMVKTRLRQWAQVVACSVRQCSS 167

[Close]

BLAST of Lsi10G005470 vs. TrEMBL
Match: A0A061DGA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000612 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.7e-44
Identity = 101/154 (65.58%), Postives = 125/154 (81.17%), Query Frame = 1


Query: 7   PPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKACLE 66
           P P P   + L+P  LYKQRSWSPD  R+EAW RRKG SK  R++SVT EDL+ELKAC+E
Sbjct: 31  PAPAPLMMSPLLP--LYKQRSWSPDIFRDEAWLRRKGNSKNRRSKSVTEEDLDELKACIE 90

Query: 67  LGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNSPSPLGS 126
           LGFGF+SPE+D RLS+TLPALGLY+AV KNY D++SKS+++ + +S D DS+  PSP+GS
Sbjct: 91  LGFGFDSPEVDQRLSDTLPALGLYYAVTKNYIDTVSKSTSSPSAAS-DCDSI--PSPIGS 150

Query: 127 PLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS 161
           P  IFG  G+NP+TVKT+LRQWAQVVACSV+ SS
Sbjct: 151 PHTIFG-PGDNPQTVKTRLRQWAQVVACSVRQSS 178

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BLAST of Lsi10G005470 vs. TrEMBL
Match: A0A0D2TZ50_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G075900 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.0e-44
Identity = 103/157 (65.61%), Postives = 125/157 (79.62%), Query Frame = 1


Query: 5   YAPPPPPPQKAGLIPT-GLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLEELKA 64
           +APPPPPP  A L P   LYKQRSWSPD  R EAW RRKG+SK  R++SVT EDL+EL+A
Sbjct: 6   HAPPPPPPLPAALQPPLPLYKQRSWSPDIIRNEAWLRRKGKSKNRRSKSVTDEDLDELRA 65

Query: 65  CLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNSPSP 124
           C+ELGFGF+S E+D RLSNTLPALGLY AVNKNY+ +ISK +++ + +S D DS++  S 
Sbjct: 66  CIELGFGFDSLEIDQRLSNTLPALGLYQAVNKNYNHTISKYASSPSAAS-DCDSIS--SA 125

Query: 125 LGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS 161
           +GSP AIFG  G+ P+ VKTKLRQWAQVVACSV+ SS
Sbjct: 126 IGSPHAIFG-PGDKPQIVKTKLRQWAQVVACSVRQSS 158

[Close]

BLAST of Lsi10G005470 vs. TAIR10
Match: AT4G33985.1 (AT4G33985.1 Protein of unknown function (DUF1685))

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-33
Identity = 85/165 (51.52%), Postives = 111/165 (67.27%), Query Frame = 1


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRS---KKERNQSVTAED 60
           MS+  AP   PP+        L KQ SWSPDA REEAW R+KG+    +  R++SVT ED
Sbjct: 1   MSKRNAPFQAPPRP-------LVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDED 60

Query: 61  LEELKACLELGFGFE--SPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDR 120
           LEELK C+ELGFGFE  SP+LD RLS TLPALGLY AVNK YS  +S++S+ ++ +S   
Sbjct: 61  LEELKGCIELGFGFEPDSPDLDPRLSETLPALGLYCAVNKQYSSRLSRTSSLSSIASEGE 120

Query: 121 DSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS 161
           +S +S + +          G++P+T+K +L+QWAQVVACSVK  S
Sbjct: 121 NSNSSTTIV--------DQGDDPETMKLRLKQWAQVVACSVKQFS 150

[Close]

BLAST of Lsi10G005470 vs. TAIR10
Match: AT2G15590.2 (AT2G15590.2 Protein of unknown function (DUF1685))

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-27
Identity = 79/165 (47.88%), Postives = 108/165 (65.45%), Query Frame = 1


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKE---RNQSVTAED 60
           MS H AP PP P         L KQ SWSPD SREEAW R+K +   +   R++SVT +D
Sbjct: 1   MSNH-APQPPRP---------LMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDD 60

Query: 61  LEELKACLELGFGFE--SPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDR 120
           +EELK C ELGFGFE  SP+L+ RLS+T+PAL LY AV++ YS+ +S+   T++F+S D 
Sbjct: 61  IEELKGCFELGFGFETESPDLNPRLSHTIPALDLYCAVHRQYSNHLSR---TSSFAS-DH 120

Query: 121 DSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSS 161
           +  NS     + +      G++ KT+K KL+QWA+VV  SV++SS
Sbjct: 121 EVSNS-----NNITTIVDKGDDRKTMKQKLKQWAKVVGFSVRHSS 146

[Close]

BLAST of Lsi10G005470 vs. TAIR10
Match: AT3G50350.1 (AT3G50350.1 Protein of unknown function (DUF1685))

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-21
Identity = 62/123 (50.41%), Postives = 77/123 (62.60%), Query Frame = 1


Query: 8   PPPPPQKAGLI---------PTGLYKQRSWSPDASREEAWQRRKGRSKKE---RNQSVTA 67
           PPP     G++          T L KQ SWSPD  REEAW +R+  S+     R +S+T 
Sbjct: 16  PPPHTPSPGVVRRIHAPPLPSTSLLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTD 75

Query: 68  EDLEELKACLELGFGFESPE-LDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPD 118
           EDL+ELKA  ELGFGF SPE  D RLSNTLPAL LY AV K+Y+D++S  S T++ S  D
Sbjct: 76  EDLDELKASFELGFGFGSPENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSD 135

[Close]

BLAST of Lsi10G005470 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685))

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15
Identity = 61/147 (41.50%), Postives = 80/147 (54.42%), Query Frame = 1


Query: 31  DASREEAWQRR-----KGRSKKERNQS--------VTAEDLEELKACLELGFGFESPELD 90
           +  R+ AW++R     K + KK+++ S        +T EDL ELK  +ELGFGF S E  
Sbjct: 46  ETPRDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGSIELGFGF-SEEAG 105

Query: 91  SRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLNSPSPLGSPLAIFGS---- 150
            +L NTLPAL LY AVN+  S   S SS+     S    S++S S   SP     S    
Sbjct: 106 QKLCNTLPALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSSIPCSPKTDSDSLKIL 165

Query: 151 -SGENPKTVKTKLRQWAQVVACSVKNS 160
             G+NP+ VK +LR WAQ VACS+  S
Sbjct: 166 CPGDNPQQVKQRLRHWAQAVACSLMQS 191

[Close]

BLAST of Lsi10G005470 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685))

HSP 1 Score: 78.6 bits (192), Expect = 4.0e-15
Identity = 48/112 (42.86%), Postives = 74/112 (66.07%), Query Frame = 1


Query: 48  ERNQSVTAEDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNT 107
           +R +S+T +DLEELK C++LGFGF   E+   L NTLPAL L +++++ +   I +  + 
Sbjct: 80  KRTKSLTDDDLEELKGCVDLGFGFNYEEI-PELCNTLPALELCYSMSQKF---IDQDHHH 139

Query: 108 TAFSSPDRDSLNSPSPLGSPLAIF--GSSGENPKTVKTKLRQWAQVVACSVK 158
            + SSP++ S    SP+ SP+A +   S G+NP  VK +L+ WAQ VAC+V+
Sbjct: 140 HSSSSPEKKSSVLDSPV-SPIASWKISSPGDNPDDVKARLKFWAQAVACTVR 186

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: gi|449463980|ref|XP_004149707.1| (PREDICTED: uncharacterized protein LOC101213862 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 144/162 (88.89%), Postives = 151/162 (93.21%), Query Frame = 1


Query: 1   MSEHYAPPPPPPQKAGLIPTGLYKQRSWSPDASREEAWQR-RKGRSKKERNQSVTAEDLE 60
           +SE Y PPPPP  KA LIPT LY+Q SWSPDASREEAWQR RKGRSKKERN+S+TAEDLE
Sbjct: 12  VSEPYTPPPPPG-KAELIPTALYRQGSWSPDASREEAWQRRRKGRSKKERNRSLTAEDLE 71

Query: 61  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLN 120
           ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNK+YSDSISKS+N TAFSSPDRD +N
Sbjct: 72  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKSYSDSISKSANRTAFSSPDRDYIN 131

Query: 121 SPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           SPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Sbjct: 132 SPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 172

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: gi|659115892|ref|XP_008457792.1| (PREDICTED: uncharacterized protein LOC103497396 [Cucumis melo])

HSP 1 Score: 271.9 bits (694), Expect = 7.0e-70
Identity = 143/163 (87.73%), Postives = 149/163 (91.41%), Query Frame = 1


Query: 1   MSEHYAPPPPPPQ-KAGLIPTGLYKQRSWSPDASREEAWQRR-KGRSKKERNQSVTAEDL 60
           +SE Y PPPPPP  KA LIPT LY+Q SWSPDASREEAWQRR KGRSKKERN+S+TAEDL
Sbjct: 12  VSEPYTPPPPPPPGKAELIPTALYRQGSWSPDASREEAWQRRKKGRSKKERNRSLTAEDL 71

Query: 61  EELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSL 120
           EELKACLELGFGFESPELDSRLS+TLPALGLYHAVNK YSDSISK  N TAFSSPDRD +
Sbjct: 72  EELKACLELGFGFESPELDSRLSDTLPALGLYHAVNKTYSDSISKYGNRTAFSSPDRDYI 131

Query: 121 NSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           NSPSPLGSPLAIFGSSGENPK VKTKLRQWAQVVACSVKNSST
Sbjct: 132 NSPSPLGSPLAIFGSSGENPKAVKTKLRQWAQVVACSVKNSST 174

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: gi|223537141|gb|EEF38774.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-45
Identity = 103/162 (63.58%), Postives = 123/162 (75.93%), Query Frame = 1


Query: 5   YAPPPPPPQKAG----LIPT-GLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLE 64
           Y PPPPPP +A     L P+  LYKQ SWSPD  R+EAW RRKG SKK++++SVT ED++
Sbjct: 137 YQPPPPPPPRAAQHKLLAPSLPLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVD 196

Query: 65  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLN 124
           ELKAC+ELGFGF+SPE+D RLS+TLPALGLYHAVNK+Y D         A SS      +
Sbjct: 197 ELKACIELGFGFDSPEMDQRLSDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCD 256

Query: 125 SPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           SPSPLGSP AIFG  G+NP+TVKT+LRQWAQVVACSV+  S+
Sbjct: 257 SPSPLGSPHAIFG-PGDNPQTVKTRLRQWAQVVACSVRQCSS 297

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: gi|1000956488|ref|XP_015577515.1| (PREDICTED: uncharacterized protein LOC8262893 [Ricinus communis])

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-45
Identity = 103/162 (63.58%), Postives = 123/162 (75.93%), Query Frame = 1


Query: 5   YAPPPPPPQKAG----LIPT-GLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTAEDLE 64
           Y PPPPPP +A     L P+  LYKQ SWSPD  R+EAW RRKG SKK++++SVT ED++
Sbjct: 32  YQPPPPPPPRAAQHKLLAPSLPLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVD 91

Query: 65  ELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDRDSLN 124
           ELKAC+ELGFGF+SPE+D RLS+TLPALGLYHAVNK+Y D         A SS      +
Sbjct: 92  ELKACIELGFGFDSPEMDQRLSDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCD 151

Query: 125 SPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           SPSPLGSP AIFG  G+NP+TVKT+LRQWAQVVACSV+  S+
Sbjct: 152 SPSPLGSPHAIFG-PGDNPQTVKTRLRQWAQVVACSVRQCSS 192

[Close]

BLAST of Lsi10G005470 vs. NCBI nr
Match: gi|643722052|gb|KDP31931.1| (hypothetical protein JCGZ_12392 [Jatropha curcas])

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-44
Identity = 101/166 (60.84%), Postives = 123/166 (74.10%), Query Frame = 1


Query: 1   MSEHYAPPPPP-----PQKAGLIPTGLYKQRSWSPDASREEAWQRRKGRSKKERNQSVTA 60
           +  H  P PPP     P      P+ LYKQ SWSPD  R+EAW +RKG  K  R++SVT 
Sbjct: 4   LQPHQPPLPPPQHQQQPPPLAQPPSSLYKQHSWSPDIYRDEAWLKRKGNCKNRRSKSVTD 63

Query: 61  EDLEELKACLELGFGFESPELDSRLSNTLPALGLYHAVNKNYSDSISKSSNTTAFSSPDR 120
           EDL+ELKAC+ELGFGF+SPE+D RLS+TLPALGLY+AVNK+Y DS+SKS+  T+ SS   
Sbjct: 64  EDLDELKACIELGFGFDSPEVDKRLSDTLPALGLYYAVNKHYYDSVSKSATATSSSSTAS 123

Query: 121 DSLNSPSPLGSPLAIFGSSGENPKTVKTKLRQWAQVVACSVKNSST 162
           D  +SPSPLGSP AI G  G+NP+ VKT+LRQWAQVVACSV+  S+
Sbjct: 124 D-CDSPSPLGSPHAILG-PGDNPQMVKTRLRQWAQVVACSVRQCSS 167

The following BLAST results are available for this feature:

BLAST of Lsi10G005470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi10G005470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJJ4_CUCSA	1.3e-70	88.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277000 PE=4 SV=1	[more]
B9SC60_RICCO	8.4e-46	63.58	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407950 PE=4 SV=1	[more]
A0A067K6R1_JATCU	1.6e-44	60.84	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12392 PE=4 SV=1	[more]
A0A061DGA0_THECC	2.7e-44	65.58	Uncharacterized protein OS=Theobroma cacao GN=TCM_000612 PE=4 SV=1	[more]
A0A0D2TZ50_GOSRA	6.0e-44	65.61	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G075900 PE=4 SV=1	[more]

BLAST of Lsi10G005470 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33985.1	1.5e-33	51.52	Protein of unknown function (DUF1685)	[more]
AT2G15590.2	2.7e-27	47.88	Protein of unknown function (DUF1685)	[more]
AT3G50350.1	1.7e-21	50.41	Protein of unknown function (DUF1685)	[more]
AT5G28690.1	1.4e-15	41.50	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	4.0e-15	42.86	Protein of unknown function (DUF1685)	[more]

BLAST of Lsi10G005470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463980\|ref\|XP_004149707.1\|	1.8e-70	88.89	PREDICTED: uncharacterized protein LOC101213862 [Cucumis sativus]	[more]
gi\|659115892\|ref\|XP_008457792.1\|	7.0e-70	87.73	PREDICTED: uncharacterized protein LOC103497396 [Cucumis melo]	[more]
gi\|223537141\|gb\|EEF38774.1\|	1.2e-45	63.58	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000956488\|ref\|XP_015577515.1\|	1.2e-45	63.58	PREDICTED: uncharacterized protein LOC8262893 [Ricinus communis]	[more]
gi\|643722052\|gb\|KDP31931.1\|	2.3e-44	60.84	hypothetical protein JCGZ_12392 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G005470.1	Lsi10G005470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 53..107 score: 4.7
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 19..161 score: 8.5
None	No IPR available	PANTHER	PTHR31865:SF1	SUBFAMILY NOT NAMED	coord: 19..161 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G005470	Csa2G277000	Cucumber (Chinese Long) v2	culsiB096
Lsi10G005470	Csa6G490880	Cucumber (Chinese Long) v2	culsiB420
Lsi10G005470	CSPI06G28120	Wild cucumber (PI 183967)	cpilsiB427
Lsi10G005470	CSPI02G13820	Wild cucumber (PI 183967)	cpilsiB094
Lsi10G005470	Cucsa.102420	Cucumber (Gy14) v1	cgylsiB124
Lsi10G005470	Cucsa.367010	Cucumber (Gy14) v1	cgylsiB594
Lsi10G005470	CmaCh02G005430	Cucurbita maxima (Rimu)	cmalsiB554
Lsi10G005470	CmaCh07G007070	Cucurbita maxima (Rimu)	cmalsiB782
Lsi10G005470	CmoCh02G005550	Cucurbita moschata (Rifu)	cmolsiB539
Lsi10G005470	Cla020209	Watermelon (97103) v1	lsiwmB065
Lsi10G005470	MELO3C020877	Melon (DHL92) v3.5.1	lsimeB054
Lsi10G005470	ClCG01G016820	Watermelon (Charleston Gray)	lsiwcgB044
Lsi10G005470	ClCG02G012570	Watermelon (Charleston Gray)	lsiwcgB045
Lsi10G005470	MELO3C020877.2	Melon (DHL92) v3.6.1	lsimedB056
Lsi10G005470	Cla97C01G015920	Watermelon (97103) v2	lsiwmbB038
Lsi10G005470	Cla97C02G038260	Watermelon (97103) v2	lsiwmbB044
Lsi10G005470	Bhi10G001711	Wax gourd	lsiwgoB082
Lsi10G005470	Cp4.1LG05g11460	Cucurbita pepo (Zucchini)	cpelsiB596
Lsi10G005470	CsGy6G027550	Cucumber (Gy14) v2	cgyblsiB388
Lsi10G005470	CsGy2G014040	Cucumber (Gy14) v2	cgyblsiB086
Lsi10G005470	Carg11618	Silver-seed gourd	carlsiB969
Lsi10G005470	Carg05220	Silver-seed gourd	carlsiB738
Lsi10G005470	CsaV3_6G043260	Cucumber (Chinese Long) v3	cuclsiB446
Lsi10G005470	CsaV3_2G016680	Cucumber (Chinese Long) v3	cuclsiB104

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Lsi10G005470	Lsi01G009770	Bottle gourd (USVL1VR-Ls)	lsilsiB027

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G005470	Cucurbita maxima (Rimu)	cmalsiB512
Lsi10G005470	Cucurbita maxima (Rimu)	cmalsiB546
Lsi10G005470	Cucurbita moschata (Rifu)	cmolsiB488
Lsi10G005470	Cucurbita moschata (Rifu)	cmolsiB530
Lsi10G005470	Wild cucumber (PI 183967)	cpilsiB091
Lsi10G005470	Cucumber (Chinese Long) v2	culsiB093