CmaCh03G009800 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G009800
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Membrane insertase YidC
Location	Cma_Chr03 : 6920651 .. 6921622 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGCTCTCTCCGGCGAGGTCTCCGGACCCCCGGCAGTGCAAACATGTCGGATACTGACGATCTCCGCTCACCGCCTCCGGCCTTGGCACGGCCTTTCCCACTCTACAAGCACTTGTCTTGGTCGCCGGATGCGGACCGTGAGGAGGCCTGGCTCCGCCGCAAAACCCAAAGCAAGATTCGGCGGAGCAAGAGCGTGACCGACGACGACTTCGAAGAACTCAAAGCCTGCGTTGAGTTGGGGTTCGGATTCAACTCTCCGGAGGTGGACCCTCGACTCTGTGAAACTTTCCCGGCGTTGGGTTTTTACCACGCAGTCAACAAGCACTACTATCGCACTCTCTCGAACTCGTCGGAGTCTCTCTGTTCTTCCCCTGTTTCGGACTCTCTTTCTCCCTCTGCCCAGAGTAGCCCCGCCGCCATAATCAGCCTCGGTATGTTACCTTCTTTACAACCCTTGAAATTGAATAGTGAAAATTGTAAGAATCCAACGGTCTTGATTTTACTTTTGTCTGTTTGGGTGTCGGGCAATTTCGAACTGGGTTTTCAGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAGCAATGGGCGCAGGTGGTTGCTTGTTCAGTACGGCAGTATTGATTATTGCCGATCAATTCATCACAAAATTTGTATCGTGTTTTTTTTTTCTTCCCAAACTTCCGTTCTGGCTTGACTACAGATTCTAATCAACACATACACATTTAATCCTCAACAATCCAAGTTCCTTTTTTTTTATTGAATTCTCTGTTTCTCAAATTCCGATGTCAAATCGACTCCATAGATATATATTAACATATTATATTCAGCGAACACAAGGAATTGGCAGAATGTGGGGGCAGCTGGCTCTTTCTTCCTTTTGAAATCATGTATATATTCTTAGGAAAAGCTTCCTAGTTAAGCTAGCTAAACGAAGCTTATGAAGCAGGGGAAGAATTGTTGGATTGGG

mRNA sequence

AATTGCTCTCTCCGGCGAGGTCTCCGGACCCCCGGCAGTGCAAACATGTCGGATACTGACGATCTCCGCTCACCGCCTCCGGCCTTGGCACGGCCTTTCCCACTCTACAAGCACTTGTCTTGGTCGCCGGATGCGGACCGTGAGGAGGCCTGGCTCCGCCGCAAAACCCAAAGCAAGATTCGGCGGAGCAAGAGCGTGACCGACGACGACTTCGAAGAACTCAAAGCCTGCGTTGAGTTGGGGTTCGGATTCAACTCTCCGGAGGTGGACCCTCGACTCTGTGAAACTTTCCCGGCGTTGGGTTTTTACCACGCAGTCAACAAGCACTACTATCGCACTCTCTCGAACTCGTCGGAGTCTCTCTGTTCTTCCCCTGTTTCGGACTCTCTTTCTCCCTCTGCCCAGAGTAGCCCCGCCGCCATAATCAGCCTCGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAGCAATGGGCGCAGGTGGTTGCTTGTTCAGTACGGCAGTATTGATTATTGCCGATCAATTCATCACAAAATTTGTATCGTGTTTTTTTTTTCTTCCCAAACTTCCGTTCTGGCTTGACTACAGATTCTAATCAACACATACACATTTAATCCTCAACAATCCAAGTTCCTTTTTTTTTATTGAATTCTCTGTTTCTCAAATTCCGATGTCAAATCGACTCCATAGATATATATTAACATATTATATTCAGCGAACACAAGGAATTGGCAGAATGTGGGGGCAGCTGGCTCTTTCTTCCTTTTGAAATCATGTATATATTCTTAGGAAAAGCTTCCTAGTTAAGCTAGCTAAACGAAGCTTATGAAGCAGGGGAAGAATTGTTGGATTGGG

Coding sequence (CDS)

ATGTCGGATACTGACGATCTCCGCTCACCGCCTCCGGCCTTGGCACGGCCTTTCCCACTCTACAAGCACTTGTCTTGGTCGCCGGATGCGGACCGTGAGGAGGCCTGGCTCCGCCGCAAAACCCAAAGCAAGATTCGGCGGAGCAAGAGCGTGACCGACGACGACTTCGAAGAACTCAAAGCCTGCGTTGAGTTGGGGTTCGGATTCAACTCTCCGGAGGTGGACCCTCGACTCTGTGAAACTTTCCCGGCGTTGGGTTTTTACCACGCAGTCAACAAGCACTACTATCGCACTCTCTCGAACTCGTCGGAGTCTCTCTGTTCTTCCCCTGTTTCGGACTCTCTTTCTCCCTCTGCCCAGAGTAGCCCCGCCGCCATAATCAGCCTCGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAGCAATGGGCGCAGGTGGTTGCTTGTTCAGTACGGCAGTATTGA

Protein sequence

MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLSPSAQSSPAAIISLGENPQTVKARLKQWAQVVACSVRQY

Homology

[Close]

BLAST of CmaCh03G009800 vs. TrEMBL
Match: A0A0A0KIC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490880 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 6.7e-69
Identity = 133/154 (86.36%), Postives = 140/154 (90.91%), Query Frame = 1


Query: 1   MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60
           MSD+ D R PPP L RPFPLYK  SWSPDADR++AWLRRKTQSK+RRSKSVTDDD EELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLSPSAQ 120
           AC+ELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSNSS SLCSSPVS+S+SPSA 
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 SSPAAIISLGENPQTVKARLKQWAQVVACSVRQY 155
           SSPAAIIS GENPQ VKARLKQWAQVVACSVRQY
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 154

[Close]

BLAST of CmaCh03G009800 vs. TrEMBL
Match: A0A067K6R1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12392 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-42
Identity = 93/147 (63.27%), Postives = 109/147 (74.15%), Query Frame = 1


Query: 8   RSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGF 67
           + PPP    P  LYK  SWSPD  R+EAWL+RK   K RRSKSVTD+D +ELKAC+ELGF
Sbjct: 18  QQPPPLAQPPSSLYKQHSWSPDIYRDEAWLKRKGNCKNRRSKSVTDEDLDELKACIELGF 77

Query: 68  GFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSESL-CSSPVSDSLSPSAQSSPAAI 127
           GF+SPEVD RL +T PALG Y+AVNKHYY ++S S+ +   SS  SD  SPS   SP AI
Sbjct: 78  GFDSPEVDKRLSDTLPALGLYYAVNKHYYDSVSKSATATSSSSTASDCDSPSPLGSPHAI 137

Query: 128 ISLGENPQTVKARLKQWAQVVACSVRQ 154
           +  G+NPQ VK RL+QWAQVVACSVRQ
Sbjct: 138 LGPGDNPQMVKTRLRQWAQVVACSVRQ 164

[Close]

BLAST of CmaCh03G009800 vs. TrEMBL
Match: A0A0D2VKX9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G105800 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 9.1e-42
Identity = 95/138 (68.84%), Postives = 107/138 (77.54%), Query Frame = 1


Query: 17  PFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGFGFNSPEVDP 76
           P PLYKH SWSPD  R+EAWLRRK  SK RRSKSVTD+D +ELKAC+ELGFGF+SPEVDP
Sbjct: 35  PVPLYKHPSWSPDIFRDEAWLRRKGNSKKRRSKSVTDEDLDELKACIELGFGFDSPEVDP 94

Query: 77  RLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLS-PSAQSSPAAIISLGENPQT 136
           RL +TFPALG Y+AVNK Y   +S  S S   S VSD  S PS   SP AI+  G+NP+T
Sbjct: 95  RLSQTFPALGLYYAVNKSYNDAISKPSTS-PPSVVSDCDSIPSPIGSPHAIVGPGDNPRT 154

Query: 137 VKARLKQWAQVVACSVRQ 154
           VK RL+QWAQVVACSVRQ
Sbjct: 155 VKTRLRQWAQVVACSVRQ 171

[Close]

BLAST of CmaCh03G009800 vs. TrEMBL
Match: B9SC60_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407950 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.9e-41
Identity = 96/152 (63.16%), Postives = 108/152 (71.05%), Query Frame = 1


Query: 10  PPPA------LARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACV 69
           PPP       LA   PLYK  SWSPD  R+EAWLRRK  SK ++SKSVTD+D +ELKAC+
Sbjct: 143 PPPRAAQHKLLAPSLPLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVDELKACI 202

Query: 70  ELGFGFNSPEVDPRLCETFPALGFYHAVNKHYY-RTLSNS-SESLCSSPVSDSLSPSAQS 129
           ELGFGF+SPE+D RL +T PALG YHAVNKHYY  T S     +  SS  SD  SPS   
Sbjct: 203 ELGFGFDSPEMDQRLSDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCDSPSPLG 262

Query: 130 SPAAIISLGENPQTVKARLKQWAQVVACSVRQ 154
           SP AI   G+NPQTVK RL+QWAQVVACSVRQ
Sbjct: 263 SPHAIFGPGDNPQTVKTRLRQWAQVVACSVRQ 294

[Close]

BLAST of CmaCh03G009800 vs. TrEMBL
Match: A0A0B0N6X4_GOSAR (Membrane insertase YidC OS=Gossypium arboreum GN=F383_35741 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.9e-41
Identity = 93/138 (67.39%), Postives = 107/138 (77.54%), Query Frame = 1


Query: 17  PFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGFGFNSPEVDP 76
           P PL+KH SWSPD  R+EAWLRRK  +K RRSKSVTD+D +ELKAC+ELGFGF+SPEVDP
Sbjct: 37  PVPLFKHPSWSPDIFRDEAWLRRKGNNKKRRSKSVTDEDLDELKACIELGFGFDSPEVDP 96

Query: 77  RLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLS-PSAQSSPAAIISLGENPQT 136
           RL +TFPALG Y+AVNK Y   +S  S S   S VSD  S PS   SP AI+  G+NP+T
Sbjct: 97  RLSDTFPALGLYYAVNKSYNDAISKPSTS-PPSVVSDCDSIPSPIGSPHAIVGPGDNPRT 156

Query: 137 VKARLKQWAQVVACSVRQ 154
           VK RL+QWAQVVACSVRQ
Sbjct: 157 VKTRLRQWAQVVACSVRQ 173

[Close]

BLAST of CmaCh03G009800 vs. TAIR10
Match: AT4G33985.1 (AT4G33985.1 Protein of unknown function (DUF1685))

HSP 1 Score: 151.0 bits (380), Expect = 6.1e-37
Identity = 84/148 (56.76%), Postives = 104/148 (70.27%), Query Frame = 1


Query: 12  PALARPFPLYKHLSWSPDADREEAWLRRKTQS---KIRRSKSVTDDDFEELKACVELGFG 71
           P  A P PL K  SWSPDADREEAWLR+K +    ++ RSKSVTD+D EELK C+ELGFG
Sbjct: 7   PFQAPPRPLVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDEDLEELKGCIELGFG 66

Query: 72  F--NSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLSPSAQSSPAAI 131
           F  +SP++DPRL ET PALG Y AVNK Y   LS +S    SS  S+  +    +S   I
Sbjct: 67  FEPDSPDLDPRLSETLPALGLYCAVNKQYSSRLSRTSS--LSSIASEGEN---SNSSTTI 126

Query: 132 ISLGENPQTVKARLKQWAQVVACSVRQY 155
           +  G++P+T+K RLKQWAQVVACSV+Q+
Sbjct: 127 VDQGDDPETMKLRLKQWAQVVACSVKQF 149

[Close]

BLAST of CmaCh03G009800 vs. TAIR10
Match: AT2G15590.2 (AT2G15590.2 Protein of unknown function (DUF1685))

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-27
Identity = 69/141 (48.94%), Postives = 89/141 (63.12%), Query Frame = 1


Query: 17  PFPLYKHLSWSPDADREEAWLRRKTQSKIR---RSKSVTDDDFEELKACVELGFGF--NS 76
           P PL K  SWSPD  REEAWLR+K +  +    RSKSVT+DD EELK C ELGFGF   S
Sbjct: 9   PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEELKGCFELGFGFETES 68

Query: 77  PEVDPRLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLSPSAQSSPAAIISLGE 136
           P+++PRL  T PAL  Y AV++ Y   LS +S       VS+S      ++   I+  G+
Sbjct: 69  PDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSSFASDHEVSNS------NNITTIVDKGD 128

Query: 137 NPQTVKARLKQWAQVVACSVR 153
           + +T+K +LKQWA+VV  SVR
Sbjct: 129 DRKTMKQKLKQWAKVVGFSVR 143

[Close]

BLAST of CmaCh03G009800 vs. TAIR10
Match: AT3G50350.1 (AT3G50350.1 Protein of unknown function (DUF1685))

HSP 1 Score: 94.4 bits (233), Expect = 6.7e-20
Identity = 59/121 (48.76%), Postives = 70/121 (57.85%), Query Frame = 1


Query: 9   SPPPALAR-----PFP---LYKHLSWSPDADREEAWLRRKTQSK---IRRSKSVTDDDFE 68
           +P P + R     P P   L K  SWSPD  REEAW +R+  S+   +RR KS+TD+D +
Sbjct: 20  TPSPGVVRRIHAPPLPSTSLLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLD 79

Query: 69  ELKACVELGFGFNSPE-VDPRLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLS 118
           ELKA  ELGFGF SPE  DPRL  T PAL  Y AV K Y   +SN S +  SS      S
Sbjct: 80  ELKASFELGFGFGSPENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDTS 139

[Close]

BLAST of CmaCh03G009800 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685))

HSP 1 Score: 91.3 bits (225), Expect = 5.7e-19
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 45  IRRSKSVTDDDFEELKACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHY----YRTLS 104
           ++R+KS+TDDD EELK CV+LGFGFN  E+ P LC T PAL   +++++ +    +   S
Sbjct: 79  LKRTKSLTDDDLEELKGCVDLGFGFNYEEI-PELCNTLPALELCYSMSQKFIDQDHHHHS 138

Query: 105 NSSESLCSSPVSDSLSPSAQSSPAAIISLGENPQTVKARLKQWAQVVACSVR 153
           +SS    SS +   +SP A      I S G+NP  VKARLK WAQ VAC+VR
Sbjct: 139 SSSPEKKSSVLDSPVSPIASWK---ISSPGDNPDDVKARLKFWAQAVACTVR 186

[Close]

BLAST of CmaCh03G009800 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685))

HSP 1 Score: 87.4 bits (215), Expect = 8.2e-18
Identity = 65/155 (41.94%), Postives = 80/155 (51.61%), Query Frame = 1


Query: 20  LYKHLSWSPDADREEAWLRRKTQS-KIRRSKS------------VTDDDFEELKACVELG 79
           L K LS   +  R+ AW +R+ Q  KI+  K             +TD+D  ELK  +ELG
Sbjct: 38  LSKQLSMR-ETPRDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGSIELG 97

Query: 80  FGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSE-----SLCSSPVSDS---LSPS 139
           FGF S E   +LC T PAL  Y AVN+      S SS      SL S+ VS S    SP 
Sbjct: 98  FGF-SEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSSIPCSPK 157

Query: 140 AQSSPAAIISLGENPQTVKARLKQWAQVVACSVRQ 154
             S    I+  G+NPQ VK RL+ WAQ VACS+ Q
Sbjct: 158 TDSDSLKILCPGDNPQQVKQRLRHWAQAVACSLMQ 190

[Close]

BLAST of CmaCh03G009800 vs. NCBI nr
Match: gi|449448322|ref|XP_004141915.1| (PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 9.6e-69
Identity = 133/154 (86.36%), Postives = 140/154 (90.91%), Query Frame = 1


Query: 1   MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60
           MSD+ D R PPP L RPFPLYK  SWSPDADR++AWLRRKTQSK+RRSKSVTDDD EELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLSPSAQ 120
           AC+ELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSNSS SLCSSPVS+S+SPSA 
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 SSPAAIISLGENPQTVKARLKQWAQVVACSVRQY 155
           SSPAAIIS GENPQ VKARLKQWAQVVACSVRQY
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 154

[Close]

BLAST of CmaCh03G009800 vs. NCBI nr
Match: gi|659133805|ref|XP_008466904.1| (PREDICTED: uncharacterized protein LOC103504252 [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 1.0e-54
Identity = 109/130 (83.85%), Postives = 116/130 (89.23%), Query Frame = 1


Query: 1   MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60
           MSD+ D R PPP  +RPFPLYK  SWSPDADR++AW+RRKTQSK+RRSKSVTDDD EELK
Sbjct: 1   MSDSADHRLPPPPFSRPFPLYKQHSWSPDADRDQAWVRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLSPSAQ 120
           ACVELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSNSS SLCSSPVSDS+SPSA 
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSDSVSPSAD 120

Query: 121 SSPAAIISLG 131
            SPAAIIS G
Sbjct: 121 GSPAAIISHG 130

[Close]

BLAST of CmaCh03G009800 vs. NCBI nr
Match: gi|643722052|gb|KDP31931.1| (hypothetical protein JCGZ_12392 [Jatropha curcas])

HSP 1 Score: 180.3 bits (456), Expect = 2.6e-42
Identity = 93/147 (63.27%), Postives = 109/147 (74.15%), Query Frame = 1


Query: 8   RSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGF 67
           + PPP    P  LYK  SWSPD  R+EAWL+RK   K RRSKSVTD+D +ELKAC+ELGF
Sbjct: 18  QQPPPLAQPPSSLYKQHSWSPDIYRDEAWLKRKGNCKNRRSKSVTDEDLDELKACIELGF 77

Query: 68  GFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSESL-CSSPVSDSLSPSAQSSPAAI 127
           GF+SPEVD RL +T PALG Y+AVNKHYY ++S S+ +   SS  SD  SPS   SP AI
Sbjct: 78  GFDSPEVDKRLSDTLPALGLYYAVNKHYYDSVSKSATATSSSSTASDCDSPSPLGSPHAI 137

Query: 128 ISLGENPQTVKARLKQWAQVVACSVRQ 154
           +  G+NPQ VK RL+QWAQVVACSVRQ
Sbjct: 138 LGPGDNPQMVKTRLRQWAQVVACSVRQ 164

[Close]

BLAST of CmaCh03G009800 vs. NCBI nr
Match: gi|823249415|ref|XP_012457342.1| (PREDICTED: uncharacterized protein LOC105778225 [Gossypium raimondii])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 95/138 (68.84%), Postives = 107/138 (77.54%), Query Frame = 1


Query: 17  PFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGFGFNSPEVDP 76
           P PLYKH SWSPD  R+EAWLRRK  SK RRSKSVTD+D +ELKAC+ELGFGF+SPEVDP
Sbjct: 35  PVPLYKHPSWSPDIFRDEAWLRRKGNSKKRRSKSVTDEDLDELKACIELGFGFDSPEVDP 94

Query: 77  RLCETFPALGFYHAVNKHYYRTLSNSSESLCSSPVSDSLS-PSAQSSPAAIISLGENPQT 136
           RL +TFPALG Y+AVNK Y   +S  S S   S VSD  S PS   SP AI+  G+NP+T
Sbjct: 95  RLSQTFPALGLYYAVNKSYNDAISKPSTS-PPSVVSDCDSIPSPIGSPHAIVGPGDNPRT 154

Query: 137 VKARLKQWAQVVACSVRQ 154
           VK RL+QWAQVVACSVRQ
Sbjct: 155 VKTRLRQWAQVVACSVRQ 171

[Close]

BLAST of CmaCh03G009800 vs. NCBI nr
Match: gi|223537141|gb|EEF38774.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 175.3 bits (443), Expect = 8.5e-41
Identity = 96/152 (63.16%), Postives = 108/152 (71.05%), Query Frame = 1


Query: 10  PPPA------LARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACV 69
           PPP       LA   PLYK  SWSPD  R+EAWLRRK  SK ++SKSVTD+D +ELKAC+
Sbjct: 143 PPPRAAQHKLLAPSLPLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVDELKACI 202

Query: 70  ELGFGFNSPEVDPRLCETFPALGFYHAVNKHYY-RTLSNS-SESLCSSPVSDSLSPSAQS 129
           ELGFGF+SPE+D RL +T PALG YHAVNKHYY  T S     +  SS  SD  SPS   
Sbjct: 203 ELGFGFDSPEMDQRLSDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCDSPSPLG 262

Query: 130 SPAAIISLGENPQTVKARLKQWAQVVACSVRQ 154
           SP AI   G+NPQTVK RL+QWAQVVACSVRQ
Sbjct: 263 SPHAIFGPGDNPQTVKTRLRQWAQVVACSVRQ 294

The following BLAST results are available for this feature:

BLAST of CmaCh03G009800 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh03G009800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIC0_CUCSA	6.7e-69	86.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490880 PE=4 SV=1	[more]
A0A067K6R1_JATCU	1.8e-42	63.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12392 PE=4 SV=1	[more]
A0A0D2VKX9_GOSRA	9.1e-42	68.84	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G105800 PE=4 SV=1	[more]
B9SC60_RICCO	5.9e-41	63.16	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407950 PE=4 SV=1	[more]
A0A0B0N6X4_GOSAR	5.9e-41	67.39	Membrane insertase YidC OS=Gossypium arboreum GN=F383_35741 PE=4 SV=1	[more]

BLAST of CmaCh03G009800 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33985.1	6.1e-37	56.76	Protein of unknown function (DUF1685)	[more]
AT2G15590.2	1.1e-27	48.94	Protein of unknown function (DUF1685)	[more]
AT3G50350.1	6.7e-20	48.76	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	5.7e-19	48.21	Protein of unknown function (DUF1685)	[more]
AT5G28690.1	8.2e-18	41.94	Protein of unknown function (DUF1685)	[more]

BLAST of CmaCh03G009800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448322\|ref\|XP_004141915.1\|	9.6e-69	86.36	PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus]	[more]
gi\|659133805\|ref\|XP_008466904.1\|	1.0e-54	83.85	PREDICTED: uncharacterized protein LOC103504252 [Cucumis melo]	[more]
gi\|643722052\|gb\|KDP31931.1\|	2.6e-42	63.27	hypothetical protein JCGZ_12392 [Jatropha curcas]	[more]
gi\|823249415\|ref\|XP_012457342.1\|	1.3e-41	68.84	PREDICTED: uncharacterized protein LOC105778225 [Gossypium raimondii]	[more]
gi\|223537141\|gb\|EEF38774.1\|	8.5e-41	63.16	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G009800.1	CmaCh03G009800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 51..104 score: 5.8
None	No IPR available	unknown	Coil	Coil	coord: 147..154 scor
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 8..153 score: 3.0
None	No IPR available	PANTHER	PTHR31865:SF1	SUBFAMILY NOT NAMED	coord: 8..153 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G009800	Cucsa.102420	Cucumber (Gy14) v1	cgycmaB0231
CmaCh03G009800	Cla000712	Watermelon (97103) v1	cmawmB630
CmaCh03G009800	Csa6G490880	Cucumber (Chinese Long) v2	cmacuB681
CmaCh03G009800	ClCG01G016820	Watermelon (Charleston Gray)	cmawcgB579
CmaCh03G009800	CSPI06G28120	Wild cucumber (PI 183967)	cmacpiB689
CmaCh03G009800	CmoCh07G007210	Cucurbita moschata (Rifu)	cmacmoB667
CmaCh03G009800	CmoCh03G009940	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G009800	Lsi01G009770	Bottle gourd (USVL1VR-Ls)	cmalsiB597
CmaCh03G009800	Cp4.1LG10g02530	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G009800	Cp4.1LG19g11080	Cucurbita pepo (Zucchini)	cmacpeB671
CmaCh03G009800	CsaV3_2G016680	Cucumber (Chinese Long) v3	cmacucB0777
CmaCh03G009800	CsaV3_6G043260	Cucumber (Chinese Long) v3	cmacucB0809
CmaCh03G009800	Cla97C01G015920	Watermelon (97103) v2	cmawmbB670
CmaCh03G009800	Bhi03G001441	Wax gourd	cmawgoB0790
CmaCh03G009800	CsGy6G027550	Cucumber (Gy14) v2	cgybcmaB831
CmaCh03G009800	Carg05220	Silver-seed gourd	carcmaB1125
CmaCh03G009800	Carg00841	Silver-seed gourd	carcmaB0567

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh03G009800	CmaCh07G007070	Cucurbita maxima (Rimu)	cmacmaB523

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G009800	Silver-seed gourd	carcmaB0254
CmaCh03G009800	Cucurbita maxima (Rimu)	cmacmaB063
CmaCh03G009800	Cucurbita maxima (Rimu)	cmacmaB517
CmaCh03G009800	Cucurbita moschata (Rifu)	cmacmoB632
CmaCh03G009800	Cucurbita moschata (Rifu)	cmacmoB646
CmaCh03G009800	Wild cucumber (PI 183967)	cmacpiB680
CmaCh03G009800	Melon (DHL92) v3.5.1	cmameB607
CmaCh03G009800	Melon (DHL92) v3.5.1	cmameB617
CmaCh03G009800	Watermelon (97103) v1	cmawmB632
CmaCh03G009800	Cucurbita pepo (Zucchini)	cmacpeB679
CmaCh03G009800	Cucurbita pepo (Zucchini)	cmacpeB684
CmaCh03G009800	Bottle gourd (USVL1VR-Ls)	cmalsiB613
CmaCh03G009800	Cucumber (Gy14) v2	cgybcmaB536
CmaCh03G009800	Melon (DHL92) v3.6.1	cmamedB691
CmaCh03G009800	Melon (DHL92) v3.6.1	cmamedB703