CmoCh03G009940 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G009940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Membrane insertase YidC
Location	Cmo_Chr03 : 7473017 .. 7474154 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCAGGTCCAACCAAAGTTGAAGTCTTTACCCCCTGGCCTACCACCAACCCCAACCCGACGCTCCCTAAATTCCCCTTTTAGTCCACTCCCTTAAGAAATCCCCATTCCAATTGCTCTCTCCGGCGAGGTCTCCGGACCCCCGGCTGTGCAAACATGTCGGATACTGACGATCTCCGCTCACCGCCTCCGGCCTTGGCACGGCCTTTCCCACTCTACAAGCACTTGTCTTGGTCGCCGGATGCGGACCGTGAGGAGGCCTGGCTCCGCCGCAAAACCCAAAGCAAGATTCGGCGGAGCAAGAGCGTGACCGACGATGACTTCGAAGAACTCAAAGCCTGCGTTGAGTTGGGGTTCGGATTCAACTCTCCGGAGGTGGACCCTCGACTCTGTGAAACTTTCCCGGCGTTGGGCTTTTACCACGCCGTCAACAAGCACTACTATCGCACTCTCTCGAACTCGTCGGCGTCTCTCTGCTCTTCCCCTGTTTCGGATTTTCTCTCTCCCTCTGCCCAGAGTAGCCCCGCCGCCATAATCAGCCTCGGTATGTTACCTTCTTTACAACCCTTGAAATTGAATAGTGAAAATTGTAAGAATCCAACGGTCTTGATTTTACTTTTGTCTGTTTGGGTGTCGGGAAATTTCGAACTGGGTTTTCAGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAGCAATGGGCACAGGTGGTTGCTTGTTCAGTACGGCAGTATTGATTATTGCCGATCAATTCATCACAAAATTTGTATCATGTTTATTTTTTTTCTTCCCAAACTTCCGTTCTGGCTTGACTACAGATTCTAATCAACACATACACATTTAATCCTCAACTATCCAAGTTCCTTTTTTTTTCTTGAATTCTCTGTTTCTCAAATTCCGAAAGTCAAATCGACTCCAAAGATATATATTAACATATTATATTCAGCGAACACAAGGAATTGACAGAATGTGGAGGCAGCTGCCTCTTCCTTCCTTTTGAAATCATGTAGATATTCTTAGGAAAAGCTTCCTAGTTAAGCTAGCTGAATGAAGCTTATGAAGCAGTGAATTATTGATTTGGAAAAGTCTTGTTATGATGAATGAGAAGCAGGACAATGAAAAGGATCTTTACCCTTGTAT

mRNA sequence

ACCAGGTCCAACCAAAGTTGAAGTCTTTACCCCCTGGCCTACCACCAACCCCAACCCGACGCTCCCTAAATTCCCCTTTTAGTCCACTCCCTTAAGAAATCCCCATTCCAATTGCTCTCTCCGGCGAGGTCTCCGGACCCCCGGCTGTGCAAACATGTCGGATACTGACGATCTCCGCTCACCGCCTCCGGCCTTGGCACGGCCTTTCCCACTCTACAAGCACTTGTCTTGGTCGCCGGATGCGGACCGTGAGGAGGCCTGGCTCCGCCGCAAAACCCAAAGCAAGATTCGGCGGAGCAAGAGCGTGACCGACGATGACTTCGAAGAACTCAAAGCCTGCGTTGAGTTGGGGTTCGGATTCAACTCTCCGGAGGTGGACCCTCGACTCTGTGAAACTTTCCCGGCGTTGGGCTTTTACCACGCCGTCAACAAGCACTACTATCGCACTCTCTCGAACTCGTCGGCGTCTCTCTGCTCTTCCCCTGTTTCGGATTTTCTCTCTCCCTCTGCCCAGAGTAGCCCCGCCGCCATAATCAGCCTCGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAGCAATGGGCACAGGTGGTTGCTTGTTCAGTACGGCAGTATTGATTATTGCCGATCAATTCATCACAAAATTTGTATCATGTTTATTTTTTTTCTTCCCAAACTTCCGTTCTGGCTTGACTACAGATTCTAATCAACACATACACATTTAATCCTCAACTATCCAAGTTCCTTTTTTTTTCTTGAATTCTCTGTTTCTCAAATTCCGAAAGTCAAATCGACTCCAAAGATATATATTAACATATTATATTCAGCGAACACAAGGAATTGACAGAATGTGGAGGCAGCTGCCTCTTCCTTCCTTTTGAAATCATGTAGATATTCTTAGGAAAAGCTTCCTAGTTAAGCTAGCTGAATGAAGCTTATGAAGCAGTGAATTATTGATTTGGAAAAGTCTTGTTATGATGAATGAGAAGCAGGACAATGAAAAGGATCTTTACCCTTGTAT

Coding sequence (CDS)

ATGTCGGATACTGACGATCTCCGCTCACCGCCTCCGGCCTTGGCACGGCCTTTCCCACTCTACAAGCACTTGTCTTGGTCGCCGGATGCGGACCGTGAGGAGGCCTGGCTCCGCCGCAAAACCCAAAGCAAGATTCGGCGGAGCAAGAGCGTGACCGACGATGACTTCGAAGAACTCAAAGCCTGCGTTGAGTTGGGGTTCGGATTCAACTCTCCGGAGGTGGACCCTCGACTCTGTGAAACTTTCCCGGCGTTGGGCTTTTACCACGCCGTCAACAAGCACTACTATCGCACTCTCTCGAACTCGTCGGCGTCTCTCTGCTCTTCCCCTGTTTCGGATTTTCTCTCTCCCTCTGCCCAGAGTAGCCCCGCCGCCATAATCAGCCTCGGGGAGAATCCGCAGACGGTGAAAGCAAGGCTGAAGCAATGGGCACAGGTGGTTGCTTGTTCAGTACGGCAGTATTGA

Homology

[Close]

BLAST of CmoCh03G009940 vs. TrEMBL
Match: A0A0A0KIC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490880 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 5.1e-69
Identity = 133/154 (86.36%), Postives = 140/154 (90.91%), Query Frame = 1


Query: 1   MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60
           MSD+ D R PPP L RPFPLYK  SWSPDADR++AWLRRKTQSK+RRSKSVTDDD EELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLSPSAQ 120
           AC+ELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSNSSASLCSSPVS+ +SPSA 
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 SSPAAIISLGENPQTVKARLKQWAQVVACSVRQY 155
           SSPAAIIS GENPQ VKARLKQWAQVVACSVRQY
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 154

[Close]

BLAST of CmoCh03G009940 vs. TrEMBL
Match: A0A067K6R1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12392 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.7e-43
Identity = 94/147 (63.95%), Postives = 110/147 (74.83%), Query Frame = 1


Query: 8   RSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGF 67
           + PPP    P  LYK  SWSPD  R+EAWL+RK   K RRSKSVTD+D +ELKAC+ELGF
Sbjct: 18  QQPPPLAQPPSSLYKQHSWSPDIYRDEAWLKRKGNCKNRRSKSVTDEDLDELKACIELGF 77

Query: 68  GFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNS-SASLCSSPVSDFLSPSAQSSPAAI 127
           GF+SPEVD RL +T PALG Y+AVNKHYY ++S S +A+  SS  SD  SPS   SP AI
Sbjct: 78  GFDSPEVDKRLSDTLPALGLYYAVNKHYYDSVSKSATATSSSSTASDCDSPSPLGSPHAI 137

Query: 128 ISLGENPQTVKARLKQWAQVVACSVRQ 154
           +  G+NPQ VK RL+QWAQVVACSVRQ
Sbjct: 138 LGPGDNPQMVKTRLRQWAQVVACSVRQ 164

[Close]

BLAST of CmoCh03G009940 vs. TrEMBL
Match: A0A0D2VKX9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G105800 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.4e-42
Identity = 95/138 (68.84%), Postives = 107/138 (77.54%), Query Frame = 1


Query: 17  PFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGFGFNSPEVDP 76
           P PLYKH SWSPD  R+EAWLRRK  SK RRSKSVTD+D +ELKAC+ELGFGF+SPEVDP
Sbjct: 35  PVPLYKHPSWSPDIFRDEAWLRRKGNSKKRRSKSVTDEDLDELKACIELGFGFDSPEVDP 94

Query: 77  RLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLS-PSAQSSPAAIISLGENPQT 136
           RL +TFPALG Y+AVNK Y   +S  S S   S VSD  S PS   SP AI+  G+NP+T
Sbjct: 95  RLSQTFPALGLYYAVNKSYNDAISKPSTS-PPSVVSDCDSIPSPIGSPHAIVGPGDNPRT 154

Query: 137 VKARLKQWAQVVACSVRQ 154
           VK RL+QWAQVVACSVRQ
Sbjct: 155 VKTRLRQWAQVVACSVRQ 171

[Close]

BLAST of CmoCh03G009940 vs. TrEMBL
Match: B9SC60_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407950 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-41
Identity = 97/152 (63.82%), Postives = 109/152 (71.71%), Query Frame = 1


Query: 10  PPPA------LARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACV 69
           PPP       LA   PLYK  SWSPD  R+EAWLRRK  SK ++SKSVTD+D +ELKAC+
Sbjct: 143 PPPRAAQHKLLAPSLPLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVDELKACI 202

Query: 70  ELGFGFNSPEVDPRLCETFPALGFYHAVNKHYY-RTLSNS-SASLCSSPVSDFLSPSAQS 129
           ELGFGF+SPE+D RL +T PALG YHAVNKHYY  T S    A+  SS  SD  SPS   
Sbjct: 203 ELGFGFDSPEMDQRLSDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCDSPSPLG 262

Query: 130 SPAAIISLGENPQTVKARLKQWAQVVACSVRQ 154
           SP AI   G+NPQTVK RL+QWAQVVACSVRQ
Sbjct: 263 SPHAIFGPGDNPQTVKTRLRQWAQVVACSVRQ 294

[Close]

BLAST of CmoCh03G009940 vs. TrEMBL
Match: A0A0B0N6X4_GOSAR (Membrane insertase YidC OS=Gossypium arboreum GN=F383_35741 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-41
Identity = 93/138 (67.39%), Postives = 107/138 (77.54%), Query Frame = 1


Query: 17  PFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGFGFNSPEVDP 76
           P PL+KH SWSPD  R+EAWLRRK  +K RRSKSVTD+D +ELKAC+ELGFGF+SPEVDP
Sbjct: 37  PVPLFKHPSWSPDIFRDEAWLRRKGNNKKRRSKSVTDEDLDELKACIELGFGFDSPEVDP 96

Query: 77  RLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLS-PSAQSSPAAIISLGENPQT 136
           RL +TFPALG Y+AVNK Y   +S  S S   S VSD  S PS   SP AI+  G+NP+T
Sbjct: 97  RLSDTFPALGLYYAVNKSYNDAISKPSTS-PPSVVSDCDSIPSPIGSPHAIVGPGDNPRT 156

Query: 137 VKARLKQWAQVVACSVRQ 154
           VK RL+QWAQVVACSVRQ
Sbjct: 157 VKTRLRQWAQVVACSVRQ 173

[Close]

BLAST of CmoCh03G009940 vs. TAIR10
Match: AT4G33985.1 (AT4G33985.1 Protein of unknown function (DUF1685))

HSP 1 Score: 151.8 bits (382), Expect = 3.6e-37
Identity = 84/149 (56.38%), Postives = 103/149 (69.13%), Query Frame = 1


Query: 12  PALARPFPLYKHLSWSPDADREEAWLRRKTQS---KIRRSKSVTDDDFEELKACVELGFG 71
           P  A P PL K  SWSPDADREEAWLR+K +    ++ RSKSVTD+D EELK C+ELGFG
Sbjct: 7   PFQAPPRPLVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDEDLEELKGCIELGFG 66

Query: 72  F--NSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLSPSAQS-SPAA 131
           F  +SP++DPRL ET PALG Y AVNK Y   LS +S+      +S   S    S S   
Sbjct: 67  FEPDSPDLDPRLSETLPALGLYCAVNKQYSSRLSRTSS------LSSIASEGENSNSSTT 126

Query: 132 IISLGENPQTVKARLKQWAQVVACSVRQY 155
           I+  G++P+T+K RLKQWAQVVACSV+Q+
Sbjct: 127 IVDQGDDPETMKLRLKQWAQVVACSVKQF 149

[Close]

BLAST of CmoCh03G009940 vs. TAIR10
Match: AT2G15590.2 (AT2G15590.2 Protein of unknown function (DUF1685))

HSP 1 Score: 119.4 bits (298), Expect = 2.0e-27
Identity = 68/141 (48.23%), Postives = 89/141 (63.12%), Query Frame = 1


Query: 17  PFPLYKHLSWSPDADREEAWLRRKTQSKIR---RSKSVTDDDFEELKACVELGFGF--NS 76
           P PL K  SWSPD  REEAWLR+K +  +    RSKSVT+DD EELK C ELGFGF   S
Sbjct: 9   PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEELKGCFELGFGFETES 68

Query: 77  PEVDPRLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLSPSAQSSPAAIISLGE 136
           P+++PRL  T PAL  Y AV++ Y   LS +S+      VS+       ++   I+  G+
Sbjct: 69  PDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSSFASDHEVSN------SNNITTIVDKGD 128

Query: 137 NPQTVKARLKQWAQVVACSVR 153
           + +T+K +LKQWA+VV  SVR
Sbjct: 129 DRKTMKQKLKQWAKVVGFSVR 143

[Close]

BLAST of CmoCh03G009940 vs. TAIR10
Match: AT3G50350.1 (AT3G50350.1 Protein of unknown function (DUF1685))

HSP 1 Score: 94.4 bits (233), Expect = 6.7e-20
Identity = 59/121 (48.76%), Postives = 70/121 (57.85%), Query Frame = 1


Query: 9   SPPPALAR-----PFP---LYKHLSWSPDADREEAWLRRKTQSK---IRRSKSVTDDDFE 68
           +P P + R     P P   L K  SWSPD  REEAW +R+  S+   +RR KS+TD+D +
Sbjct: 20  TPSPGVVRRIHAPPLPSTSLLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLD 79

Query: 69  ELKACVELGFGFNSPE-VDPRLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLS 118
           ELKA  ELGFGF SPE  DPRL  T PAL  Y AV K Y   +SN S +  SS      S
Sbjct: 80  ELKASFELGFGFGSPENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDTS 139

[Close]

BLAST of CmoCh03G009940 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685))

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-19
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 1


Query: 45  IRRSKSVTDDDFEELKACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHY----YRTLS 104
           ++R+KS+TDDD EELK CV+LGFGFN  E+ P LC T PAL   +++++ +    +   S
Sbjct: 79  LKRTKSLTDDDLEELKGCVDLGFGFNYEEI-PELCNTLPALELCYSMSQKFIDQDHHHHS 138

Query: 105 NSSASLCSSPVSDFLSPSAQSSPAAIISLGENPQTVKARLKQWAQVVACSVR 153
           +SS    SS +   +SP A      I S G+NP  VKARLK WAQ VAC+VR
Sbjct: 139 SSSPEKKSSVLDSPVSPIASWK---ISSPGDNPDDVKARLKFWAQAVACTVR 186

[Close]

BLAST of CmoCh03G009940 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685))

HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17
Identity = 64/155 (41.29%), Postives = 80/155 (51.61%), Query Frame = 1


Query: 20  LYKHLSWSPDADREEAWLRRKTQS-KIRRSKS------------VTDDDFEELKACVELG 79
           L K LS   +  R+ AW +R+ Q  KI+  K             +TD+D  ELK  +ELG
Sbjct: 38  LSKQLSMR-ETPRDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGSIELG 97

Query: 80  FGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSA-----SLCSSPVSDF---LSPS 139
           FGF S E   +LC T PAL  Y AVN+      S SS+     SL S+ VS      SP 
Sbjct: 98  FGF-SEEAGQKLCNTLPALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSSIPCSPK 157

Query: 140 AQSSPAAIISLGENPQTVKARLKQWAQVVACSVRQ 154
             S    I+  G+NPQ VK RL+ WAQ VACS+ Q
Sbjct: 158 TDSDSLKILCPGDNPQQVKQRLRHWAQAVACSLMQ 190

[Close]

BLAST of CmoCh03G009940 vs. NCBI nr
Match: gi|449448322|ref|XP_004141915.1| (PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 7.4e-69
Identity = 133/154 (86.36%), Postives = 140/154 (90.91%), Query Frame = 1


Query: 1   MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60
           MSD+ D R PPP L RPFPLYK  SWSPDADR++AWLRRKTQSK+RRSKSVTDDD EELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLSPSAQ 120
           AC+ELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSNSSASLCSSPVS+ +SPSA 
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 SSPAAIISLGENPQTVKARLKQWAQVVACSVRQY 155
           SSPAAIIS GENPQ VKARLKQWAQVVACSVRQY
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 154

[Close]

BLAST of CmoCh03G009940 vs. NCBI nr
Match: gi|659133805|ref|XP_008466904.1| (PREDICTED: uncharacterized protein LOC103504252 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 7.9e-55
Identity = 109/130 (83.85%), Postives = 116/130 (89.23%), Query Frame = 1


Query: 1   MSDTDDLRSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELK 60
           MSD+ D R PPP  +RPFPLYK  SWSPDADR++AW+RRKTQSK+RRSKSVTDDD EELK
Sbjct: 1   MSDSADHRLPPPPFSRPFPLYKQHSWSPDADRDQAWVRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLSPSAQ 120
           ACVELGFGFNSPEVDPRLCETFPALGFYHAVNK Y RTLSNSSASLCSSPVSD +SPSA 
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSDSVSPSAD 120

Query: 121 SSPAAIISLG 131
            SPAAIIS G
Sbjct: 121 GSPAAIISHG 130

[Close]

BLAST of CmoCh03G009940 vs. NCBI nr
Match: gi|643722052|gb|KDP31931.1| (hypothetical protein JCGZ_12392 [Jatropha curcas])

HSP 1 Score: 182.6 bits (462), Expect = 5.3e-43
Identity = 94/147 (63.95%), Postives = 110/147 (74.83%), Query Frame = 1


Query: 8   RSPPPALARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGF 67
           + PPP    P  LYK  SWSPD  R+EAWL+RK   K RRSKSVTD+D +ELKAC+ELGF
Sbjct: 18  QQPPPLAQPPSSLYKQHSWSPDIYRDEAWLKRKGNCKNRRSKSVTDEDLDELKACIELGF 77

Query: 68  GFNSPEVDPRLCETFPALGFYHAVNKHYYRTLSNS-SASLCSSPVSDFLSPSAQSSPAAI 127
           GF+SPEVD RL +T PALG Y+AVNKHYY ++S S +A+  SS  SD  SPS   SP AI
Sbjct: 78  GFDSPEVDKRLSDTLPALGLYYAVNKHYYDSVSKSATATSSSSTASDCDSPSPLGSPHAI 137

Query: 128 ISLGENPQTVKARLKQWAQVVACSVRQ 154
           +  G+NPQ VK RL+QWAQVVACSVRQ
Sbjct: 138 LGPGDNPQMVKTRLRQWAQVVACSVRQ 164

[Close]

BLAST of CmoCh03G009940 vs. NCBI nr
Match: gi|823249415|ref|XP_012457342.1| (PREDICTED: uncharacterized protein LOC105778225 [Gossypium raimondii])

HSP 1 Score: 178.7 bits (452), Expect = 7.7e-42
Identity = 95/138 (68.84%), Postives = 107/138 (77.54%), Query Frame = 1


Query: 17  PFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACVELGFGFNSPEVDP 76
           P PLYKH SWSPD  R+EAWLRRK  SK RRSKSVTD+D +ELKAC+ELGFGF+SPEVDP
Sbjct: 35  PVPLYKHPSWSPDIFRDEAWLRRKGNSKKRRSKSVTDEDLDELKACIELGFGFDSPEVDP 94

Query: 77  RLCETFPALGFYHAVNKHYYRTLSNSSASLCSSPVSDFLS-PSAQSSPAAIISLGENPQT 136
           RL +TFPALG Y+AVNK Y   +S  S S   S VSD  S PS   SP AI+  G+NP+T
Sbjct: 95  RLSQTFPALGLYYAVNKSYNDAISKPSTS-PPSVVSDCDSIPSPIGSPHAIVGPGDNPRT 154

Query: 137 VKARLKQWAQVVACSVRQ 154
           VK RL+QWAQVVACSVRQ
Sbjct: 155 VKTRLRQWAQVVACSVRQ 171

[Close]

BLAST of CmoCh03G009940 vs. NCBI nr
Match: gi|223537141|gb|EEF38774.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-41
Identity = 97/152 (63.82%), Postives = 109/152 (71.71%), Query Frame = 1


Query: 10  PPPA------LARPFPLYKHLSWSPDADREEAWLRRKTQSKIRRSKSVTDDDFEELKACV 69
           PPP       LA   PLYK  SWSPD  R+EAWLRRK  SK ++SKSVTD+D +ELKAC+
Sbjct: 143 PPPRAAQHKLLAPSLPLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVDELKACI 202

Query: 70  ELGFGFNSPEVDPRLCETFPALGFYHAVNKHYY-RTLSNS-SASLCSSPVSDFLSPSAQS 129
           ELGFGF+SPE+D RL +T PALG YHAVNKHYY  T S    A+  SS  SD  SPS   
Sbjct: 203 ELGFGFDSPEMDQRLSDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCDSPSPLG 262

Query: 130 SPAAIISLGENPQTVKARLKQWAQVVACSVRQ 154
           SP AI   G+NPQTVK RL+QWAQVVACSVRQ
Sbjct: 263 SPHAIFGPGDNPQTVKTRLRQWAQVVACSVRQ 294

The following BLAST results are available for this feature:

BLAST of CmoCh03G009940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh03G009940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIC0_CUCSA	5.1e-69	86.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490880 PE=4 SV=1	[more]
A0A067K6R1_JATCU	3.7e-43	63.95	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12392 PE=4 SV=1	[more]
A0A0D2VKX9_GOSRA	5.4e-42	68.84	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G105800 PE=4 SV=1	[more]
B9SC60_RICCO	1.2e-41	63.82	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407950 PE=4 SV=1	[more]
A0A0B0N6X4_GOSAR	3.5e-41	67.39	Membrane insertase YidC OS=Gossypium arboreum GN=F383_35741 PE=4 SV=1	[more]

BLAST of CmoCh03G009940 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33985.1	3.6e-37	56.38	Protein of unknown function (DUF1685)	[more]
AT2G15590.2	2.0e-27	48.23	Protein of unknown function (DUF1685)	[more]
AT3G50350.1	6.7e-20	48.76	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	7.4e-19	48.21	Protein of unknown function (DUF1685)	[more]
AT5G28690.1	1.4e-17	41.29	Protein of unknown function (DUF1685)	[more]

BLAST of CmoCh03G009940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448322\|ref\|XP_004141915.1\|	7.4e-69	86.36	PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus]	[more]
gi\|659133805\|ref\|XP_008466904.1\|	7.9e-55	83.85	PREDICTED: uncharacterized protein LOC103504252 [Cucumis melo]	[more]
gi\|643722052\|gb\|KDP31931.1\|	5.3e-43	63.95	hypothetical protein JCGZ_12392 [Jatropha curcas]	[more]
gi\|823249415\|ref\|XP_012457342.1\|	7.7e-42	68.84	PREDICTED: uncharacterized protein LOC105778225 [Gossypium raimondii]	[more]
gi\|223537141\|gb\|EEF38774.1\|	1.7e-41	63.82	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G009940.1	CmoCh03G009940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 51..104 score: 6.5
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 8..153 score: 1.0
None	No IPR available	PANTHER	PTHR31865:SF1	SUBFAMILY NOT NAMED	coord: 8..153 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G009940	Cucsa.102420	Cucumber (Gy14) v1	cgycmoB0227
CmoCh03G009940	CmaCh03G009800	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G009940	CmaCh07G007070	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G009940	Cla020209	Watermelon (97103) v1	cmowmB638
CmoCh03G009940	Cla000712	Watermelon (97103) v1	cmowmB622
CmoCh03G009940	Csa6G490880	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G009940	ClCG01G016820	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G009940	ClCG02G012570	Watermelon (Charleston Gray)	cmowcgB578
CmoCh03G009940	CSPI06G28120	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G009940	Lsi01G009770	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G009940	Cp4.1LG10g02530	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G009940	Cp4.1LG19g11080	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G009940	CsaV3_6G043260	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G009940	Cla97C01G015920	Watermelon (97103) v2	cmowmbB642
CmoCh03G009940	Bhi03G001441	Wax gourd	cmowgoB0785
CmoCh03G009940	CsGy6G027550	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G009940	Carg05220	Silver-seed gourd	carcmoB1095
CmoCh03G009940	Carg00841	Silver-seed gourd	carcmoB0551

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G009940	CmoCh07G007210	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G009940	Wild cucumber (PI 183967)	cmocpiB672
CmoCh03G009940	Melon (DHL92) v3.5.1	cmomeB596
CmoCh03G009940	Melon (DHL92) v3.5.1	cmomeB605
CmoCh03G009940	Watermelon (97103) v1	cmowmB623
CmoCh03G009940	Cucurbita pepo (Zucchini)	cmocpeB633
CmoCh03G009940	Cucurbita pepo (Zucchini)	cmocpeB637
CmoCh03G009940	Bottle gourd (USVL1VR-Ls)	cmolsiB601
CmoCh03G009940	Cucumber (Gy14) v2	cgybcmoB510
CmoCh03G009940	Melon (DHL92) v3.6.1	cmomedB683
CmoCh03G009940	Melon (DHL92) v3.6.1	cmomedB694
CmoCh03G009940	Silver-seed gourd	carcmoB0262
CmoCh03G009940	Cucurbita moschata (Rifu)	cmocmoB028
CmoCh03G009940	Cucurbita maxima (Rimu)	cmacmoB058