CSPI06G28120.1 (mRNA) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G28120.1
Type	mRNA
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Protein of unknown function (DUF1685)
Location	Chr6 : 24574775 .. 24576410 (-)
Sequence length	465

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGAATTGATTTTATTTATAAGAAAAGTTGATTGGGCCATCAAATAAGCATTTTGTTGTGAAAGAAAAGGGAATTGTGATGTTCTTTTACTTTTGAGGGAAAAATGAAGAAACAAACTTGGGAAAAAAGAGAGAACGGCGACAGGTCAGCATGACGAGGACCAACCAAAGTTGAAGTCTTTACCTCTGGCCCACCTCCACCATCACCACCACCACCGCCTCCACGCTCCCCTATATTCCTCTTTCTCCTCTATTTCATTAACCAATTCCCCCCCTTTACCCATATCGATTCCAATCCCTCTCCCCGGCGAGGTCTCCGGACCCCCGGCGGTACACCACATGTCGGATTCCGCCGACCATCGCCTTCCGCCTCCCCCCTTAACTCGCCCTTTCCCGCTCTACAAGCAGCACTCCTGGTCGCCCGATGCCGACCGTGACCAAGCCTGGCTTCGCCGCAAAACCCAAAGCAAGATGCGACGGAGCAAGAGCGTGACCGACGATGACCTCGAAGAACTTAAAGCCTGCCTTGAATTGGGTTTTGGATTCAACTCACCGGAGGTGGACCCTCGACTCTGTGAAACTTTTCCAGCGTTGGGATTTTACCACGCCGTCAACAAGCAGTACAATCGTACTCTTTCCAACTCTTCGGCGTCTCTCTGCTCTTCCCCTGTTTCTGAATCTGTTTCTCCCTCTGCCGACAGTAGCCCCGCCGCCATAATCAGCCACGGTATGTTAATTTTCTAACAAACCCCTTTCTGAAATTGAATAGTGAATCTTGTTTTTAATTTTGATTTATGTGTTTGGACGTCGGGAAATTCCAAACTGGGTTTTCAGGGGAGAATCCGCAGATGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTGGTTGCTTGTTCAGTACGGCAGTATTGATTCTTGCTAATCAATTTCATCACTAAATTTGTGTTGGGTTTTTTTTCGTTTTCCTTCTCAGACTTCCGTTTCTGACTTGACTACAAATTCTAATCAACACATACACATTTAATCCTCAATTTCCCAAATTTTCTTCTACTTTCTTGTTTTTCTTGAATTCTCTGTTTCCGAAATTCTGGTTGGCAAATCGACTTCAAAGTTATTTAATTTTAAATTATAATCAGCGAACACAAGGAAAGTTGGAAGAACAAGGAGGCAACTGGGTCTATCTTTCGCTTCCACACGTATCCTTTTCATATTATCTCAAGAAATTTTTGGTTTCTGAAATCATGATGGAAACGAAAGGGGATTCTGAATTTGAAGATGACAAGTTTGGCGTGTACACAACGACGACAGTAAATTGATAGTTTTTTTTTCCCTTTCTTCACGATTTACTGATATTTTTAAAATTGCATAATGAATAAATAAAAGTATTTCCAAAATCAAATTCATTTATTTCTGAAATTTGTGTGTGACCAAATTATGTGCCGTGTATGCATAATAATTGTACGTTGAACAATGACACAGTTATTACTATATCTATTTTGCTCACATTGATAAGTAGAGTGTAGATTATTGTAAGAAGAAGACAATGAGGAGACTTTGATAATTTGTAGTATTTGATTAGTTTAATTACATGTCAGTTTTCTTGTGTTAAGACAAATAATATTATATTTATGGTGGAG

mRNA sequence

ATGTCGGATTCCGCCGACCATCGCCTTCCGCCTCCCCCCTTAACTCGCCCTTTCCCGCTCTACAAGCAGCACTCCTGGTCGCCCGATGCCGACCGTGACCAAGCCTGGCTTCGCCGCAAAACCCAAAGCAAGATGCGACGGAGCAAGAGCGTGACCGACGATGACCTCGAAGAACTTAAAGCCTGCCTTGAATTGGGTTTTGGATTCAACTCACCGGAGGTGGACCCTCGACTCTGTGAAACTTTTCCAGCGTTGGGATTTTACCACGCCGTCAACAAGCAGTACAATCGTACTCTTTCCAACTCTTCGGCGTCTCTCTGCTCTTCCCCTGTTTCTGAATCTGTTTCTCCCTCTGCCGACAGTAGCCCCGCCGCCATAATCAGCCACGGGGAGAATCCGCAGATGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTGGTTGCTTGTTCAGTACGGCAGTATTGA

Coding sequence (CDS)

ATGTCGGATTCCGCCGACCATCGCCTTCCGCCTCCCCCCTTAACTCGCCCTTTCCCGCTCTACAAGCAGCACTCCTGGTCGCCCGATGCCGACCGTGACCAAGCCTGGCTTCGCCGCAAAACCCAAAGCAAGATGCGACGGAGCAAGAGCGTGACCGACGATGACCTCGAAGAACTTAAAGCCTGCCTTGAATTGGGTTTTGGATTCAACTCACCGGAGGTGGACCCTCGACTCTGTGAAACTTTTCCAGCGTTGGGATTTTACCACGCCGTCAACAAGCAGTACAATCGTACTCTTTCCAACTCTTCGGCGTCTCTCTGCTCTTCCCCTGTTTCTGAATCTGTTTCTCCCTCTGCCGACAGTAGCCCCGCCGCCATAATCAGCCACGGGGAGAATCCGCAGATGGTGAAAGCAAGGCTGAAACAATGGGCGCAGGTGGTTGCTTGTTCAGTACGGCAGTATTGA

Homology

[Close]

BLAST of CSPI06G28120.1 vs. TrEMBL
Match: A0A0A0KIC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490880 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.8e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60
           MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120
           ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 155
           SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 154

[Close]

BLAST of CSPI06G28120.1 vs. TrEMBL
Match: A0A067K6R1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12392 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.3e-43
Identity = 97/149 (65.10%), Postives = 115/149 (77.18%), Query Frame = 1


Query: 7   HRLPPPPLTRP-FPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELKACLEL 66
           H+  PPPL +P   LYKQHSWSPD  RD+AWL+RK   K RRSKSVTD+DL+ELKAC+EL
Sbjct: 16  HQQQPPPLAQPPSSLYKQHSWSPDIYRDEAWLKRKGNCKNRRSKSVTDEDLDELKACIEL 75

Query: 67  GFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNS-SASLCSSPVSESVSPSADSSPA 126
           GFGF+SPEVD RL +T PALG Y+AVNK Y  ++S S +A+  SS  S+  SPS   SP 
Sbjct: 76  GFGFDSPEVDKRLSDTLPALGLYYAVNKHYYDSVSKSATATSSSSTASDCDSPSPLGSPH 135

Query: 127 AIISHGENPQMVKARLKQWAQVVACSVRQ 154
           AI+  G+NPQMVK RL+QWAQVVACSVRQ
Sbjct: 136 AILGPGDNPQMVKTRLRQWAQVVACSVRQ 164

[Close]

BLAST of CSPI06G28120.1 vs. TrEMBL
Match: A0A0D2VKX9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G105800 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.2e-41
Identity = 94/145 (64.83%), Postives = 107/145 (73.79%), Query Frame = 1


Query: 9   LPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELKACLELGFG 68
           L PPP+    PLYK  SWSPD  RD+AWLRRK  SK RRSKSVTD+DL+ELKAC+ELGFG
Sbjct: 31  LMPPPV----PLYKHPSWSPDIFRDEAWLRRKGNSKKRRSKSVTDEDLDELKACIELGFG 90

Query: 69  FNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSADSSPAAIIS 128
           F+SPEVDPRL +TFPALG Y+AVNK YN  +S  S S  S        PS   SP AI+ 
Sbjct: 91  FDSPEVDPRLSQTFPALGLYYAVNKSYNDAISKPSTSPPSVVSDCDSIPSPIGSPHAIVG 150

Query: 129 HGENPQMVKARLKQWAQVVACSVRQ 154
            G+NP+ VK RL+QWAQVVACSVRQ
Sbjct: 151 PGDNPRTVKTRLRQWAQVVACSVRQ 171

[Close]

BLAST of CSPI06G28120.1 vs. TrEMBL
Match: A0A0D2TZ50_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G075900 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.7e-41
Identity = 93/153 (60.78%), Postives = 113/153 (73.86%), Query Frame = 1


Query: 6   DHRLPPPP-----LTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 65
           DH  PPPP     L  P PLYKQ SWSPD  R++AWLRRK +SK RRSKSVTD+DL+EL+
Sbjct: 5   DHAPPPPPPLPAALQPPLPLYKQRSWSPDIIRNEAWLRRKGKSKNRRSKSVTDEDLDELR 64

Query: 66  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 125
           AC+ELGFGF+S E+D RL  T PALG Y AVNK YN T+S  ++S  ++   +S+S SA 
Sbjct: 65  ACIELGFGFDSLEIDQRLSNTLPALGLYQAVNKNYNHTISKYASSPSAASDCDSIS-SAI 124

Query: 126 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQ 154
            SP AI   G+ PQ+VK +L+QWAQVVACSVRQ
Sbjct: 125 GSPHAIFGPGDKPQIVKTKLRQWAQVVACSVRQ 156

[Close]

BLAST of CSPI06G28120.1 vs. TrEMBL
Match: B9SC60_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407950 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 6.0e-41
Identity = 95/153 (62.09%), Postives = 110/153 (71.90%), Query Frame = 1


Query: 10  PPPP-------LTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELKAC 69
           PPPP       L    PLYKQHSWSPD  RD+AWLRRK  SK ++SKSVTD+D++ELKAC
Sbjct: 142 PPPPRAAQHKLLAPSLPLYKQHSWSPDIYRDEAWLRRKGNSKKKKSKSVTDEDVDELKAC 201

Query: 70  LELGFGFNSPEVDPRLCETFPALGFYHAVNKQ-YNRTLSNS-SASLCSSPVSESVSPSAD 129
           +ELGFGF+SPE+D RL +T PALG YHAVNK  Y+ T S    A+  SS  S+  SPS  
Sbjct: 202 IELGFGFDSPEMDQRLSDTLPALGLYHAVNKHYYDHTFSKPVMAASSSSTASDCDSPSPL 261

Query: 130 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQ 154
            SP AI   G+NPQ VK RL+QWAQVVACSVRQ
Sbjct: 262 GSPHAIFGPGDNPQTVKTRLRQWAQVVACSVRQ 294

[Close]

BLAST of CSPI06G28120.1 vs. TAIR10
Match: AT4G33985.1 (AT4G33985.1 Protein of unknown function (DUF1685))

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-38
Identity = 84/143 (58.74%), Postives = 107/143 (74.83%), Query Frame = 1


Query: 17  PFPLYKQHSWSPDADRDQAWLRRKTQS---KMRRSKSVTDDDLEELKACLELGFGF--NS 76
           P PL KQHSWSPDADR++AWLR+K +    ++ RSKSVTD+DLEELK C+ELGFGF  +S
Sbjct: 12  PRPLVKQHSWSPDADREEAWLRKKGKQSLGRLGRSKSVTDEDLEELKGCIELGFGFEPDS 71

Query: 77  PEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSADSSPAAIISHGE 136
           P++DPRL ET PALG Y AVNKQY+  LS +S+   SS  SE  +    +S   I+  G+
Sbjct: 72  PDLDPRLSETLPALGLYCAVNKQYSSRLSRTSS--LSSIASEGEN---SNSSTTIVDQGD 131

Query: 137 NPQMVKARLKQWAQVVACSVRQY 155
           +P+ +K RLKQWAQVVACSV+Q+
Sbjct: 132 DPETMKLRLKQWAQVVACSVKQF 149

[Close]

BLAST of CSPI06G28120.1 vs. TAIR10
Match: AT2G15590.2 (AT2G15590.2 Protein of unknown function (DUF1685))

HSP 1 Score: 122.5 bits (306), Expect = 2.3e-28
Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 1


Query: 17  PFPLYKQHSWSPDADRDQAWLRRKTQSKMR---RSKSVTDDDLEELKACLELGFGF--NS 76
           P PL KQ+SWSPD  R++AWLR+K +  +    RSKSVT+DD+EELK C ELGFGF   S
Sbjct: 9   PRPLMKQYSWSPDMSREEAWLRKKKKRPLDLLPRSKSVTNDDIEELKGCFELGFGFETES 68

Query: 77  PEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSADSSPAAIISHGE 136
           P+++PRL  T PAL  Y AV++QY+  LS +S+      VS S      ++   I+  G+
Sbjct: 69  PDLNPRLSHTIPALDLYCAVHRQYSNHLSRTSSFASDHEVSNS------NNITTIVDKGD 128

Query: 137 NPQMVKARLKQWAQVVACSVR 153
           + + +K +LKQWA+VV  SVR
Sbjct: 129 DRKTMKQKLKQWAKVVGFSVR 143

[Close]

BLAST of CSPI06G28120.1 vs. TAIR10
Match: AT3G50350.1 (AT3G50350.1 Protein of unknown function (DUF1685))

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 60/112 (53.57%), Postives = 71/112 (63.39%), Query Frame = 1


Query: 10  PPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSK---MRRSKSVTDDDLEELKACLELG 69
           PP P T    L KQHSWSPD  R++AW +R+  S+   +RR KS+TD+DL+ELKA  ELG
Sbjct: 32  PPLPSTS---LLKQHSWSPDLIREEAWSKRQDISRHRHLRRGKSLTDEDLDELKASFELG 91

Query: 70  FGFNSPE-VDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSP 118
           FGF SPE  DPRL  T PAL  Y AV K YN  +SN S +  SS      SP
Sbjct: 92  FGFGSPENADPRLSNTLPALELYFAVQKSYNDAVSNKSTTSSSSLSDGDTSP 140

[Close]

BLAST of CSPI06G28120.1 vs. TAIR10
Match: AT5G28690.1 (AT5G28690.1 Protein of unknown function (DUF1685))

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20
Identity = 66/146 (45.21%), Postives = 82/146 (56.16%), Query Frame = 1


Query: 29  DADRDQAWLRR-----KTQSKMRRSKS--------VTDDDLEELKACLELGFGFNSPEVD 88
           +  RD AW +R     K Q K ++S S        +TD+DL ELK  +ELGFGF S E  
Sbjct: 46  ETPRDVAWEKRRRQMLKIQEKKQKSVSENDNDSPDLTDEDLRELKGSIELGFGF-SEEAG 105

Query: 89  PRLCETFPALGFYHAVNKQYNRTLSNSSA-----SLCSSPVSES---VSPSADSSPAAII 148
            +LC T PAL  Y AVN+Q +   S SS+     SL S+ VS S    SP  DS    I+
Sbjct: 106 QKLCNTLPALDLYFAVNRQLSPLPSPSSSNGGDGSLSSTSVSSSSIPCSPKTDSDSLKIL 165

Query: 149 SHGENPQMVKARLKQWAQVVACSVRQ 154
             G+NPQ VK RL+ WAQ VACS+ Q
Sbjct: 166 CPGDNPQQVKQRLRHWAQAVACSLMQ 190

[Close]

BLAST of CSPI06G28120.1 vs. TAIR10
Match: AT2G43340.1 (AT2G43340.1 Protein of unknown function (DUF1685))

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-19
Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 1


Query: 45  MRRSKSVTDDDLEELKACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQY----NRTLS 104
           ++R+KS+TDDDLEELK C++LGFGFN  E+ P LC T PAL   +++++++    +   S
Sbjct: 79  LKRTKSLTDDDLEELKGCVDLGFGFNYEEI-PELCNTLPALELCYSMSQKFIDQDHHHHS 138

Query: 105 NSSASLCSSPVSESVSPSADSSPAAIISHGENPQMVKARLKQWAQVVACSVR 153
           +SS    SS +   VSP A      I S G+NP  VKARLK WAQ VAC+VR
Sbjct: 139 SSSPEKKSSVLDSPVSPIASWK---ISSPGDNPDDVKARLKFWAQAVACTVR 186

[Close]

BLAST of CSPI06G28120.1 vs. NCBI nr
Match: gi|449448322|ref|XP_004141915.1| (PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus])

HSP 1 Score: 313.2 bits (801), Expect = 2.6e-82
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60
           MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120
           ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD
Sbjct: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120

Query: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 155
           SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY
Sbjct: 121 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQY 154

[Close]

BLAST of CSPI06G28120.1 vs. NCBI nr
Match: gi|659133805|ref|XP_008466904.1| (PREDICTED: uncharacterized protein LOC103504252 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 3.8e-65
Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 1


Query: 1   MSDSADHRLPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 60
           MSDSADHRLPPPP +RPFPLYKQHSWSPDADRDQAW+RRKTQSKMRRSKSVTDDDLEELK
Sbjct: 1   MSDSADHRLPPPPFSRPFPLYKQHSWSPDADRDQAWVRRKTQSKMRRSKSVTDDDLEELK 60

Query: 61  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 120
           AC+ELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVS+SVSPSAD
Sbjct: 61  ACVELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSDSVSPSAD 120

Query: 121 SSPAAIISHG 131
            SPAAIISHG
Sbjct: 121 GSPAAIISHG 130

[Close]

BLAST of CSPI06G28120.1 vs. NCBI nr
Match: gi|643722052|gb|KDP31931.1| (hypothetical protein JCGZ_12392 [Jatropha curcas])

HSP 1 Score: 184.1 bits (466), Expect = 1.8e-43
Identity = 97/149 (65.10%), Postives = 115/149 (77.18%), Query Frame = 1


Query: 7   HRLPPPPLTRP-FPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELKACLEL 66
           H+  PPPL +P   LYKQHSWSPD  RD+AWL+RK   K RRSKSVTD+DL+ELKAC+EL
Sbjct: 16  HQQQPPPLAQPPSSLYKQHSWSPDIYRDEAWLKRKGNCKNRRSKSVTDEDLDELKACIEL 75

Query: 67  GFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNS-SASLCSSPVSESVSPSADSSPA 126
           GFGF+SPEVD RL +T PALG Y+AVNK Y  ++S S +A+  SS  S+  SPS   SP 
Sbjct: 76  GFGFDSPEVDKRLSDTLPALGLYYAVNKHYYDSVSKSATATSSSSTASDCDSPSPLGSPH 135

Query: 127 AIISHGENPQMVKARLKQWAQVVACSVRQ 154
           AI+  G+NPQMVK RL+QWAQVVACSVRQ
Sbjct: 136 AILGPGDNPQMVKTRLRQWAQVVACSVRQ 164

[Close]

BLAST of CSPI06G28120.1 vs. NCBI nr
Match: gi|823249415|ref|XP_012457342.1| (PREDICTED: uncharacterized protein LOC105778225 [Gossypium raimondii])

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-41
Identity = 94/145 (64.83%), Postives = 107/145 (73.79%), Query Frame = 1


Query: 9   LPPPPLTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELKACLELGFG 68
           L PPP+    PLYK  SWSPD  RD+AWLRRK  SK RRSKSVTD+DL+ELKAC+ELGFG
Sbjct: 31  LMPPPV----PLYKHPSWSPDIFRDEAWLRRKGNSKKRRSKSVTDEDLDELKACIELGFG 90

Query: 69  FNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSADSSPAAIIS 128
           F+SPEVDPRL +TFPALG Y+AVNK YN  +S  S S  S        PS   SP AI+ 
Sbjct: 91  FDSPEVDPRLSQTFPALGLYYAVNKSYNDAISKPSTSPPSVVSDCDSIPSPIGSPHAIVG 150

Query: 129 HGENPQMVKARLKQWAQVVACSVRQ 154
            G+NP+ VK RL+QWAQVVACSVRQ
Sbjct: 151 PGDNPRTVKTRLRQWAQVVACSVRQ 171

[Close]

BLAST of CSPI06G28120.1 vs. NCBI nr
Match: gi|823206242|ref|XP_012437038.1| (PREDICTED: uncharacterized protein LOC105763363 [Gossypium raimondii])

HSP 1 Score: 176.4 bits (446), Expect = 3.8e-41
Identity = 93/153 (60.78%), Postives = 113/153 (73.86%), Query Frame = 1


Query: 6   DHRLPPPP-----LTRPFPLYKQHSWSPDADRDQAWLRRKTQSKMRRSKSVTDDDLEELK 65
           DH  PPPP     L  P PLYKQ SWSPD  R++AWLRRK +SK RRSKSVTD+DL+EL+
Sbjct: 5   DHAPPPPPPLPAALQPPLPLYKQRSWSPDIIRNEAWLRRKGKSKNRRSKSVTDEDLDELR 64

Query: 66  ACLELGFGFNSPEVDPRLCETFPALGFYHAVNKQYNRTLSNSSASLCSSPVSESVSPSAD 125
           AC+ELGFGF+S E+D RL  T PALG Y AVNK YN T+S  ++S  ++   +S+S SA 
Sbjct: 65  ACIELGFGFDSLEIDQRLSNTLPALGLYQAVNKNYNHTISKYASSPSAASDCDSIS-SAI 124

Query: 126 SSPAAIISHGENPQMVKARLKQWAQVVACSVRQ 154
            SP AI   G+ PQ+VK +L+QWAQVVACSVRQ
Sbjct: 125 GSPHAIFGPGDKPQIVKTKLRQWAQVVACSVRQ 156

The following BLAST results are available for this feature:

BLAST of CSPI06G28120.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI06G28120.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIC0_CUCSA	1.8e-82	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490880 PE=4 SV=1	[more]
A0A067K6R1_JATCU	1.3e-43	65.10	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12392 PE=4 SV=1	[more]
A0A0D2VKX9_GOSRA	1.2e-41	64.83	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G105800 PE=4 SV=1	[more]
A0A0D2TZ50_GOSRA	2.7e-41	60.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G075900 PE=4 SV=1	[more]
B9SC60_RICCO	6.0e-41	62.09	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1407950 PE=4 SV=1	[more]

BLAST of CSPI06G28120.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33985.1	1.1e-38	58.74	Protein of unknown function (DUF1685)	[more]
AT2G15590.2	2.3e-28	48.23	Protein of unknown function (DUF1685)	[more]
AT3G50350.1	1.9e-22	53.57	Protein of unknown function (DUF1685)	[more]
AT5G28690.1	1.8e-20	45.21	Protein of unknown function (DUF1685)	[more]
AT2G43340.1	2.0e-19	49.11	Protein of unknown function (DUF1685)	[more]

BLAST of CSPI06G28120.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448322\|ref\|XP_004141915.1\|	2.6e-82	100.00	PREDICTED: uncharacterized protein LOC101216565 [Cucumis sativus]	[more]
gi\|659133805\|ref\|XP_008466904.1\|	3.8e-65	95.38	PREDICTED: uncharacterized protein LOC103504252 [Cucumis melo]	[more]
gi\|643722052\|gb\|KDP31931.1\|	1.8e-43	65.10	hypothetical protein JCGZ_12392 [Jatropha curcas]	[more]
gi\|823249415\|ref\|XP_012457342.1\|	1.7e-41	64.83	PREDICTED: uncharacterized protein LOC105778225 [Gossypium raimondii]	[more]
gi\|823206242\|ref\|XP_012437038.1\|	3.8e-41	60.78	PREDICTED: uncharacterized protein LOC105763363 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR012881	DUF1685

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CSPI06G28120	CSPI06G28120	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CSPI06G28120.1	CSPI06G28120.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G28120.1.utr3p1	CSPI06G28120.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G28120.1.cds2	CSPI06G28120.1.cds2	CDS
CSPI06G28120.1.cds1	CSPI06G28120.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CSPI06G28120.1.utr5p1	CSPI06G28120.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012881	Protein of unknown function DUF1685	PFAM	PF07939	DUF1685	coord: 51..104 score: 2.0
None	No IPR available	PANTHER	PTHR31865	FAMILY NOT NAMED	coord: 11..153 score: 7.5
None	No IPR available	PANTHER	PTHR31865:SF1	SUBFAMILY NOT NAMED	coord: 11..153 score: 7.5