Cla011066 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla011066
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Blue copper protein (AHRD V1 *--- B6UCC3_MAIZE); contains Interpro domain(s) IPR008972 Cupredoxin
Location	Chr3 : 24790029 .. 24791139 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTGTAAGTTGTTCATTTTCTTTTCTTTTTGATGATTATATGAGATGGAAATTTTGGCAATGGGATTGTGTTATCTAAACAGTACTAGAGAATTTTGGTCAGGTTTTTCATATAAAGTTAGGGTTAAAAGAAGTCAAATTTTAGGGGTAATTTCCCATTTGTAAGGTAAAATATGTTTTCACCTAAGCTAATCATGTCCCTATTTTTCAATTGTATTTAAAATAATCATTAATTTTTAGTTCTTACTCCATTTCTTTTCATTTTGGGGTTTTCACCTTTTCAACTCTTTTTCAAATAACATATATATGATCATTAAAGTCAAAGAAAATCTCACATCTTAATATGAAAAACAAAATTTTAATTTGGCTCATATGTAGACACATATACATGAAGATCAATTATATTATATCATAAATGCGTTGTAGGCAACAAAATTGTTATTATTATTATTTTGAGTCCAAAAAAGGTGTATAATTTGATGAAGATTTGAATCTTTGATTACTTTTAAGAAGGTTTATAATCTTTTGTAGTTATAGACTTTTACGATTTTTCTAACTTTTTCTTCTTCTGGGGTTTCTTTTTTTTTTTTTTTTTTTTTTAGATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCCAATTCCTTCTTCTAA

mRNA sequence

ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCCAATTCCTTCTTCTAA

Coding sequence (CDS)

ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCCAATTCCTTCTTCTAA

Protein sequence

MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINISMANSFF

Homology

[Close]

BLAST of Cla011066 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.5e-26
Identity = 56/104 (53.85%), Postives = 71/104 (68.27%), Query Frame = 1


Query: 33  HRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIF 92
           + VG  K+ W PNIN+T W+  +HFY+GDWLYF FD++ +N+LEVNKT YEGC     I 
Sbjct: 29  YTVGENKF-WNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIR 88

Query: 93  NITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP 136
           N TRG GRD+  L + K YY L G+G C+ GMK++V VE+  PP
Sbjct: 89  NWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEKLPPP 131

[Close]

BLAST of Cla011066 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-09
Identity = 39/116 (33.62%), Postives = 55/116 (47.41%), Query Frame = 1


Query: 36  GGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNIT 95
           G G +   P  N+  WS    F V D LYF + K   +VLEVNK  Y+ CN K+ I  + 
Sbjct: 35  GSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVD 94

Query: 96  RGGRDVFNLTEAKTYYFLSG-RGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHS 151
            G  ++ +L     +YF+SG    C +G K+ V V           +P+T+ S H+
Sbjct: 95  DGDSEI-SLDRYGPFYFISGNEDNCKKGQKLNVVV-------ISARIPSTAQSPHA 142

[Close]

BLAST of Cla011066 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.9e-07
Identity = 33/102 (32.35%), Postives = 50/102 (49.02%), Query Frame = 1


Query: 32  LHRVGGGKYTWTPNI--NFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYEGCNDKD 91
           +H+VG     WT  +  ++  W+    F+VGD L F ++   +NVL+V++  ++ CN   
Sbjct: 3   VHKVGDST-GWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSS 62

Query: 92  FIFNITRGGRDVFNLTEAKTYYFLSG-RGFCFQGMKVAVFVE 131
              + T  G D   L    T+YFL G  G C  G KV + V+
Sbjct: 63  PAASYT-SGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: A0A059C599_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01880 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.4e-48
Identity = 96/161 (59.63%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           MLG   + V  +AV+ + G    G EGR+PVLHRVGGG+ TWTP++NFT+WS HE FYVG
Sbjct: 1   MLGFGEKVVMIVAVLVMLGVRGSGAEGRKPVLHRVGGGQNTWTPSVNFTNWSSHEQFYVG 60

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDK  YNVLEVN+TSY+ C D DFI N+T+GGRDVFNL +AK YYF+ GRG+CF
Sbjct: 61  DWLYFGFDKTQYNVLEVNETSYDKCIDTDFITNVTKGGRDVFNLIDAKPYYFICGRGYCF 120

Query: 121 QGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSI 162
            GMKVAV V   +PP+ PP     SPS    +    +LLS+
Sbjct: 121 NGMKVAVNV-TVAPPLPPPPKKGGSPSSVGGVSQRMILLSL 160

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: G7J772_MEDTR (Early nodulin-like protein OS=Medicago truncatula GN=MTR_3g117110 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.0e-46
Identity = 88/129 (68.22%), Postives = 101/129 (78.29%), Query Frame = 1


Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSY 82
           + +EGR+PVLHRVGGG+YTW P INFT+W+ +EHFY GDWLYFGFDKHIYNVLEVNKT+Y
Sbjct: 20  YRIEGREPVLHRVGGGRYTWDPKINFTNWASNEHFYQGDWLYFGFDKHIYNVLEVNKTNY 79

Query: 83  EGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLP 142
           E C DK FI NITRGGRDVF L EAKTYYFL GRGFCF GMKV + VE   P  + P +P
Sbjct: 80  EKCVDKGFISNITRGGRDVFQLLEAKTYYFLCGRGFCFHGMKVDINVEPLPPDNASPIVP 139

Query: 143 NTSPSLHSL 152
             + S   +
Sbjct: 140 EKACSTRKM 148

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: A0A067FSC1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030501mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 99/164 (60.37%), Postives = 120/164 (73.17%), Query Frame = 1


Query: 9   VTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFD 68
           + TM+V+ V        E R PVLHRVGGGKYTW PN+NFT W+ H+HFYVGDWLYFGFD
Sbjct: 16  MVTMSVLCVH------TESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFD 75

Query: 69  KHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRG-FCFQGMKVAV 128
           KH YNVL+VNKT+YE C DKDFI N+TRGGRDVFNLTEAK +YF+ GRG +C +GMK+AV
Sbjct: 76  KHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAV 135

Query: 129 FVE-EYSPPISPPNLP-NTSPSLHSLIWPFSLLLSINISMANSF 170
            VE +  PP + PNL  + SPS  S+     LLL+  I+  + F
Sbjct: 136 HVETDPPPPTASPNLTISASPSPSSI--HGHLLLACTIAFLSIF 171

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: V4U6E0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016919mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-46
Identity = 97/161 (60.25%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 12  MAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHI 71
           + V+     L    E R PVLHRVGGGKYTW PN+NFT W+ H+HFYVGDWLYFGFDKH 
Sbjct: 13  IVVMVTMSVLCAHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHK 72

Query: 72  YNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRG-FCFQGMKVAVFVE 131
           YNVL+VNKT+YE C DKDFI N+TRGGRDVFNLTEAK +YF+ GRG +C +GMK+AV VE
Sbjct: 73  YNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVE 132

Query: 132 -EYSPPISPPNLP-NTSPSLHSLIWPFSLLLSINISMANSF 170
            +  PP + PNL  + SPS  S+     LLL+  I+  + F
Sbjct: 133 TDPPPPTASPNLTISASPSPSSI--HGHLLLACTIAFLSIF 171

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: A0A151TDQ0_CAJCA (Lamin-like protein OS=Cajanus cajan GN=KK1_011355 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-46
Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 1


Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSY 82
           + +EGR P LHRVGGG+YTWTP +NFT W+ HEHFY GDWLYFGFDKHIYNVLEVNKT+Y
Sbjct: 9   YKIEGRDPTLHRVGGGRYTWTPKVNFTKWASHEHFYKGDWLYFGFDKHIYNVLEVNKTNY 68

Query: 83  EGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLP 142
           E C D  FI NITRGGRDVF L EA+ YYFL GRGFC QGMK+A+ V E +P + P  L 
Sbjct: 69  ENCIDTSFINNITRGGRDVFQLLEARPYYFLCGRGFCSQGMKIAINVVESTPALPPTALS 128

Query: 143 N 144
           N
Sbjct: 129 N 129

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|659100428|ref|XP_008451094.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-72
Identity = 139/169 (82.25%), Postives = 143/169 (84.62%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           M GMAA+ V T  VV V GWLL GVEG+QPVLH VGGGKYTWT NINFTDWSIHEHFYVG
Sbjct: 1   MFGMAAKVVIT-TVVVVVGWLLCGVEGKQPVLHNVGGGKYTWTTNINFTDWSIHEHFYVG 60

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDKHIYNVLEVNKTSYE CNDKDFIFNIT+GGRDVFNLTEAKTYYFLSGRGFCF
Sbjct: 61  DWLYFGFDKHIYNVLEVNKTSYENCNDKDFIFNITKGGRDVFNLTEAKTYYFLSGRGFCF 120

Query: 121 QGMKVAVFVEEYSPP----ISPPNL----PNTSPSLHSLIWPFSLLLSI 162
           QGMKVAVFVEEYS P    ISPPNL    PN SPSL  L+ PFS LL I
Sbjct: 121 QGMKVAVFVEEYSTPPPTIISPPNLPKNNPNLSPSLKPLLIPFSFLLLI 168

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|1009113764|ref|XP_015873323.1| (PREDICTED: lamin-like protein [Ziziphus jujuba])

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 99/146 (67.81%), Postives = 109/146 (74.66%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           M+G     V  M  V V   LL   E R PVLHRVGGG+Y W P  NFT+WSIHEHFYVG
Sbjct: 1   MVGSRKRLVLKMVAVMVIMKLLCA-ECRDPVLHRVGGGRYGWNPETNFTEWSIHEHFYVG 60

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDK  ++VLEVN++SYE C DK FI NITRGGRDVFNLTEAKTYYFL GRGFC 
Sbjct: 61  DWLYFGFDKKTHSVLEVNRSSYEKCIDKGFISNITRGGRDVFNLTEAKTYYFLDGRGFCI 120

Query: 121 QGMKVAVFVEEYSPPISPPNLPNTSP 147
           +GMKV+V VEEY PPI P + P  SP
Sbjct: 121 KGMKVSVLVEEYFPPIRPLSSPPDSP 145

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|657986969|ref|XP_008385631.1| (PREDICTED: lamin-like protein [Malus domestica])

HSP 1 Score: 198.7 bits (504), Expect = 7.9e-48
Identity = 97/148 (65.54%), Postives = 109/148 (73.65%), Query Frame = 1


Query: 19  GWLLFGV-------EGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHI 78
           GW L  V       E RQPVLHR+GGG+ TW P IN T WS  E FYVGDWLYFGFDK I
Sbjct: 11  GWWLMVVMIILKVAECRQPVLHRIGGGRNTWAPRINXTQWSSQERFYVGDWLYFGFDKRI 70

Query: 79  YNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEE 138
           YNVLEVN TSYE C DKDFI+NITRGGRDVFNLTEAKTY+FL GRG+CF+GMKVA+ V+E
Sbjct: 71  YNVLEVNSTSYENCVDKDFIYNITRGGRDVFNLTEAKTYFFLXGRGYCFEGMKVAIHVQE 130

Query: 139 YSPPISPPNLPNTSPS-LHSLIWPFSLL 159
             P   PPN  N S S +H+ I   ++L
Sbjct: 131 IPPEQLPPNSANDSQSYVHNHITLLAML 158

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|702342545|ref|XP_010056607.1| (PREDICTED: lamin-like protein isoform X2 [Eucalyptus grandis])

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-47
Identity = 96/161 (59.63%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           MLG   + V  +AV+ + G    G EGR+PVLHRVGGG+ TWTP++NFT+WS HE FYVG
Sbjct: 1   MLGFGEKVVMIVAVLVMLGVRGSGAEGRKPVLHRVGGGQNTWTPSVNFTNWSSHEQFYVG 60

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDK  YNVLEVN+TSY+ C D DFI N+T+GGRDVFNL +AK YYF+ GRG+CF
Sbjct: 61  DWLYFGFDKTQYNVLEVNETSYDKCIDTDFITNVTKGGRDVFNLIDAKPYYFICGRGYCF 120

Query: 121 QGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSI 162
            GMKVAV V   +PP+ PP     SPS    +    +LLS+
Sbjct: 121 NGMKVAVNV-TVAPPLPPPPKKGGSPSSVGGVSQRMILLSL 160

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|702342540|ref|XP_010056606.1| (PREDICTED: lamin-like protein isoform X1 [Eucalyptus grandis])

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-47
Identity = 96/161 (59.63%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           MLG   + V  +AV+ + G    G EGR+PVLHRVGGG+ TWTP++NFT+WS HE FYVG
Sbjct: 26  MLGFGEKVVMIVAVLVMLGVRGSGAEGRKPVLHRVGGGQNTWTPSVNFTNWSSHEQFYVG 85

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDK  YNVLEVN+TSY+ C D DFI N+T+GGRDVFNL +AK YYF+ GRG+CF
Sbjct: 86  DWLYFGFDKTQYNVLEVNETSYDKCIDTDFITNVTKGGRDVFNLIDAKPYYFICGRGYCF 145

Query: 121 QGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSI 162
            GMKVAV V   +PP+ PP     SPS    +    +LLS+
Sbjct: 146 NGMKVAVNV-TVAPPLPPPPKKGGSPSSVGGVSQRMILLSL 185

The following BLAST results are available for this feature:

BLAST of Cla011066 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LAML_ARATH	8.5e-26	53.85	Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1	[more]
ENL2_ARATH	7.3e-09	33.62	Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1	[more]
MAVI_CUCPE	8.9e-07	32.35	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]

BLAST of Cla011066 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A059C599_EUCGR	9.4e-48	59.63	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01880 PE=4 SV=1	[more]
G7J772_MEDTR	1.0e-46	68.22	Early nodulin-like protein OS=Medicago truncatula GN=MTR_3g117110 PE=4 SV=1	[more]
A0A067FSC1_CITSI	1.4e-46	60.37	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030501mg PE=4 SV=1	[more]
V4U6E0_9ROSI	1.8e-46	60.25	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016919mg PE=4 SV=1	[more]
A0A151TDQ0_CAJCA	3.0e-46	70.25	Lamin-like protein OS=Cajanus cajan GN=KK1_011355 PE=4 SV=1	[more]

BLAST of Cla011066 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100428\|ref\|XP_008451094.1\|	1.6e-72	82.25	PREDICTED: lamin-like protein [Cucumis melo]	[more]
gi\|1009113764\|ref\|XP_015873323.1\|	2.5e-49	67.81	PREDICTED: lamin-like protein [Ziziphus jujuba]	[more]
gi\|657986969\|ref\|XP_008385631.1\|	7.9e-48	65.54	PREDICTED: lamin-like protein [Malus domestica]	[more]
gi\|702342545\|ref\|XP_010056607.1\|	1.4e-47	59.63	PREDICTED: lamin-like protein isoform X2 [Eucalyptus grandis]	[more]
gi\|702342540\|ref\|XP_010056606.1\|	1.4e-47	59.63	PREDICTED: lamin-like protein isoform X1 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla011066	Cla011066.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 65..129 score: 4.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 42..123 score: 1.1
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 31..131 score: 29
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 33..134 score: 2.5
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 32..129 score: 7.3
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 12..150 score: 1.6
None	No IPR available	PANTHER	PTHR33021:SF4	EARLY NODULIN-LIKE PROTEIN 20	coord: 12..150 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla011066	Cla97C03G064260	Watermelon (97103) v2	wmwmbB125
Cla011066	ClCG03G014080	Watermelon (Charleston Gray)	wcgwmB224
Cla011066	Cucsa.142760	Cucumber (Gy14) v1	cgywmB251
Cla011066	CmaCh10G009720	Cucurbita maxima (Rimu)	cmawmB046
Cla011066	CmoCh10G010250	Cucurbita moschata (Rifu)	cmowmB037
Cla011066	Lsi06G004450	Bottle gourd (USVL1VR-Ls)	lsiwmB396
Cla011066	Cp4.1LG18g01270	Cucurbita pepo (Zucchini)	cpewmB355
Cla011066	CsGy1G029030	Cucumber (Gy14) v2	cgybwmB022
Cla011066	MELO3C029408.2	Melon (DHL92) v3.6.1	medwmB262
Cla011066	Carg16974	Silver-seed gourd	carwmB0463
Cla011066	CsaV3_1G042160	Cucumber (Chinese Long) v3	cucwmB025

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla011066	Wax gourd	wgowmB653
Cla011066	Wax gourd	wgowmB659
Cla011066	Cucurbita maxima (Rimu)	cmawmB099
Cla011066	Cucurbita moschata (Rifu)	cmowmB088
Cla011066	Melon (DHL92) v3.5.1	mewmB271
Cla011066	Cucumber (Chinese Long) v2	cuwmB020
Cla011066	Cucurbita pepo (Zucchini)	cpewmB642
Cla011066	Silver-seed gourd	carwmB0163