Cla011066.1 (mRNA) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla011066
Type	mRNA
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Blue copper protein (AHRD V1 *--- B6UCC3_MAIZE); contains Interpro domain(s) IPR008972 Cupredoxin
Location	Chr3 : 24790029 .. 24791139 (-)
Sequence length	513

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTGTAAGTTGTTCATTTTCTTTTCTTTTTGATGATTATATGAGATGGAAATTTTGGCAATGGGATTGTGTTATCTAAACAGTACTAGAGAATTTTGGTCAGGTTTTTCATATAAAGTTAGGGTTAAAAGAAGTCAAATTTTAGGGGTAATTTCCCATTTGTAAGGTAAAATATGTTTTCACCTAAGCTAATCATGTCCCTATTTTTCAATTGTATTTAAAATAATCATTAATTTTTAGTTCTTACTCCATTTCTTTTCATTTTGGGGTTTTCACCTTTTCAACTCTTTTTCAAATAACATATATATGATCATTAAAGTCAAAGAAAATCTCACATCTTAATATGAAAAACAAAATTTTAATTTGGCTCATATGTAGACACATATACATGAAGATCAATTATATTATATCATAAATGCGTTGTAGGCAACAAAATTGTTATTATTATTATTTTGAGTCCAAAAAAGGTGTATAATTTGATGAAGATTTGAATCTTTGATTACTTTTAAGAAGGTTTATAATCTTTTGTAGTTATAGACTTTTACGATTTTTCTAACTTTTTCTTCTTCTGGGGTTTCTTTTTTTTTTTTTTTTTTTTTTAGATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCCAATTCCTTCTTCTAA

mRNA sequence

ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCCAATTCCTTCTTCTAA

Coding sequence (CDS)

ATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTTGCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGGTGATTGGCTTTATTTTGGGTTTGATAAACATATCTACAACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACATATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCCATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCCAATTCCTTCTTCTAA

Protein sequence

MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINISMANSFF

Homology

[Close]

BLAST of Cla011066 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.5e-26
Identity = 56/104 (53.85%), Postives = 71/104 (68.27%), Query Frame = 1


Query: 33  HRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIF 92
           + VG  K+ W PNIN+T W+  +HFY+GDWLYF FD++ +N+LEVNKT YEGC     I 
Sbjct: 29  YTVGENKF-WNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIR 88

Query: 93  NITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP 136
           N TRG GRD+  L + K YY L G+G C+ GMK++V VE+  PP
Sbjct: 89  NWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEKLPPP 131

[Close]

BLAST of Cla011066 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-09
Identity = 39/116 (33.62%), Postives = 55/116 (47.41%), Query Frame = 1


Query: 36  GGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNIT 95
           G G +   P  N+  WS    F V D LYF + K   +VLEVNK  Y+ CN K+ I  + 
Sbjct: 35  GSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVD 94

Query: 96  RGGRDVFNLTEAKTYYFLSG-RGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHS 151
            G  ++ +L     +YF+SG    C +G K+ V V           +P+T+ S H+
Sbjct: 95  DGDSEI-SLDRYGPFYFISGNEDNCKKGQKLNVVV-------ISARIPSTAQSPHA 142

[Close]

BLAST of Cla011066 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.9e-07
Identity = 33/102 (32.35%), Postives = 50/102 (49.02%), Query Frame = 1


Query: 32  LHRVGGGKYTWTPNI--NFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSYEGCNDKD 91
           +H+VG     WT  +  ++  W+    F+VGD L F ++   +NVL+V++  ++ CN   
Sbjct: 3   VHKVGDST-GWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSS 62

Query: 92  FIFNITRGGRDVFNLTEAKTYYFLSG-RGFCFQGMKVAVFVE 131
              + T  G D   L    T+YFL G  G C  G KV + V+
Sbjct: 63  PAASYT-SGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: A0A059C599_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01880 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.4e-48
Identity = 96/161 (59.63%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           MLG   + V  +AV+ + G    G EGR+PVLHRVGGG+ TWTP++NFT+WS HE FYVG
Sbjct: 1   MLGFGEKVVMIVAVLVMLGVRGSGAEGRKPVLHRVGGGQNTWTPSVNFTNWSSHEQFYVG 60

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDK  YNVLEVN+TSY+ C D DFI N+T+GGRDVFNL +AK YYF+ GRG+CF
Sbjct: 61  DWLYFGFDKTQYNVLEVNETSYDKCIDTDFITNVTKGGRDVFNLIDAKPYYFICGRGYCF 120

Query: 121 QGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSI 162
            GMKVAV V   +PP+ PP     SPS    +    +LLS+
Sbjct: 121 NGMKVAVNV-TVAPPLPPPPKKGGSPSSVGGVSQRMILLSL 160

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: G7J772_MEDTR (Early nodulin-like protein OS=Medicago truncatula GN=MTR_3g117110 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.0e-46
Identity = 88/129 (68.22%), Postives = 101/129 (78.29%), Query Frame = 1


Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSY 82
           + +EGR+PVLHRVGGG+YTW P INFT+W+ +EHFY GDWLYFGFDKHIYNVLEVNKT+Y
Sbjct: 20  YRIEGREPVLHRVGGGRYTWDPKINFTNWASNEHFYQGDWLYFGFDKHIYNVLEVNKTNY 79

Query: 83  EGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLP 142
           E C DK FI NITRGGRDVF L EAKTYYFL GRGFCF GMKV + VE   P  + P +P
Sbjct: 80  EKCVDKGFISNITRGGRDVFQLLEAKTYYFLCGRGFCFHGMKVDINVEPLPPDNASPIVP 139

Query: 143 NTSPSLHSL 152
             + S   +
Sbjct: 140 EKACSTRKM 148

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: A0A067FSC1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030501mg PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 99/164 (60.37%), Postives = 120/164 (73.17%), Query Frame = 1


Query: 9   VTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFD 68
           + TM+V+ V        E R PVLHRVGGGKYTW PN+NFT W+ H+HFYVGDWLYFGFD
Sbjct: 16  MVTMSVLCVH------TESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFD 75

Query: 69  KHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRG-FCFQGMKVAV 128
           KH YNVL+VNKT+YE C DKDFI N+TRGGRDVFNLTEAK +YF+ GRG +C +GMK+AV
Sbjct: 76  KHKYNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAV 135

Query: 129 FVE-EYSPPISPPNLP-NTSPSLHSLIWPFSLLLSINISMANSF 170
            VE +  PP + PNL  + SPS  S+     LLL+  I+  + F
Sbjct: 136 HVETDPPPPTASPNLTISASPSPSSI--HGHLLLACTIAFLSIF 171

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: V4U6E0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016919mg PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.8e-46
Identity = 97/161 (60.25%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 12  MAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHI 71
           + V+     L    E R PVLHRVGGGKYTW PN+NFT W+ H+HFYVGDWLYFGFDKH 
Sbjct: 13  IVVMVTMSVLCAHTESRSPVLHRVGGGKYTWKPNVNFTQWAEHQHFYVGDWLYFGFDKHK 72

Query: 72  YNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRG-FCFQGMKVAVFVE 131
           YNVL+VNKT+YE C DKDFI N+TRGGRDVFNLTEAK +YF+ GRG +C +GMK+AV VE
Sbjct: 73  YNVLQVNKTNYEKCGDKDFIENVTRGGRDVFNLTEAKPFYFICGRGDYCSKGMKIAVHVE 132

Query: 132 -EYSPPISPPNLP-NTSPSLHSLIWPFSLLLSINISMANSF 170
            +  PP + PNL  + SPS  S+     LLL+  I+  + F
Sbjct: 133 TDPPPPTASPNLTISASPSPSSI--HGHLLLACTIAFLSIF 171

[Close]

BLAST of Cla011066 vs. TrEMBL
Match: A0A151TDQ0_CAJCA (Lamin-like protein OS=Cajanus cajan GN=KK1_011355 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.0e-46
Identity = 85/121 (70.25%), Postives = 96/121 (79.34%), Query Frame = 1


Query: 23  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHIYNVLEVNKTSY 82
           + +EGR P LHRVGGG+YTWTP +NFT W+ HEHFY GDWLYFGFDKHIYNVLEVNKT+Y
Sbjct: 9   YKIEGRDPTLHRVGGGRYTWTPKVNFTKWASHEHFYKGDWLYFGFDKHIYNVLEVNKTNY 68

Query: 83  EGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLP 142
           E C D  FI NITRGGRDVF L EA+ YYFL GRGFC QGMK+A+ V E +P + P  L 
Sbjct: 69  ENCIDTSFINNITRGGRDVFQLLEARPYYFLCGRGFCSQGMKIAINVVESTPALPPTALS 128

Query: 143 N 144
           N
Sbjct: 129 N 129

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|659100428|ref|XP_008451094.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-72
Identity = 139/169 (82.25%), Postives = 143/169 (84.62%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           M GMAA+ V T  VV V GWLL GVEG+QPVLH VGGGKYTWT NINFTDWSIHEHFYVG
Sbjct: 1   MFGMAAKVVIT-TVVVVVGWLLCGVEGKQPVLHNVGGGKYTWTTNINFTDWSIHEHFYVG 60

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDKHIYNVLEVNKTSYE CNDKDFIFNIT+GGRDVFNLTEAKTYYFLSGRGFCF
Sbjct: 61  DWLYFGFDKHIYNVLEVNKTSYENCNDKDFIFNITKGGRDVFNLTEAKTYYFLSGRGFCF 120

Query: 121 QGMKVAVFVEEYSPP----ISPPNL----PNTSPSLHSLIWPFSLLLSI 162
           QGMKVAVFVEEYS P    ISPPNL    PN SPSL  L+ PFS LL I
Sbjct: 121 QGMKVAVFVEEYSTPPPTIISPPNLPKNNPNLSPSLKPLLIPFSFLLLI 168

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|1009113764|ref|XP_015873323.1| (PREDICTED: lamin-like protein [Ziziphus jujuba])

HSP 1 Score: 203.8 bits (517), Expect = 2.5e-49
Identity = 99/146 (67.81%), Postives = 109/146 (74.66%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           M+G     V  M  V V   LL   E R PVLHRVGGG+Y W P  NFT+WSIHEHFYVG
Sbjct: 1   MVGSRKRLVLKMVAVMVIMKLLCA-ECRDPVLHRVGGGRYGWNPETNFTEWSIHEHFYVG 60

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDK  ++VLEVN++SYE C DK FI NITRGGRDVFNLTEAKTYYFL GRGFC 
Sbjct: 61  DWLYFGFDKKTHSVLEVNRSSYEKCIDKGFISNITRGGRDVFNLTEAKTYYFLDGRGFCI 120

Query: 121 QGMKVAVFVEEYSPPISPPNLPNTSP 147
           +GMKV+V VEEY PPI P + P  SP
Sbjct: 121 KGMKVSVLVEEYFPPIRPLSSPPDSP 145

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|657986969|ref|XP_008385631.1| (PREDICTED: lamin-like protein [Malus domestica])

HSP 1 Score: 198.7 bits (504), Expect = 7.9e-48
Identity = 97/148 (65.54%), Postives = 109/148 (73.65%), Query Frame = 1


Query: 19  GWLLFGV-------EGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVGDWLYFGFDKHI 78
           GW L  V       E RQPVLHR+GGG+ TW P IN T WS  E FYVGDWLYFGFDK I
Sbjct: 11  GWWLMVVMIILKVAECRQPVLHRIGGGRNTWAPRINXTQWSSQERFYVGDWLYFGFDKRI 70

Query: 79  YNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEE 138
           YNVLEVN TSYE C DKDFI+NITRGGRDVFNLTEAKTY+FL GRG+CF+GMKVA+ V+E
Sbjct: 71  YNVLEVNSTSYENCVDKDFIYNITRGGRDVFNLTEAKTYFFLXGRGYCFEGMKVAIHVQE 130

Query: 139 YSPPISPPNLPNTSPS-LHSLIWPFSLL 159
             P   PPN  N S S +H+ I   ++L
Sbjct: 131 IPPEQLPPNSANDSQSYVHNHITLLAML 158

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|702342545|ref|XP_010056607.1| (PREDICTED: lamin-like protein isoform X2 [Eucalyptus grandis])

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-47
Identity = 96/161 (59.63%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           MLG   + V  +AV+ + G    G EGR+PVLHRVGGG+ TWTP++NFT+WS HE FYVG
Sbjct: 1   MLGFGEKVVMIVAVLVMLGVRGSGAEGRKPVLHRVGGGQNTWTPSVNFTNWSSHEQFYVG 60

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDK  YNVLEVN+TSY+ C D DFI N+T+GGRDVFNL +AK YYF+ GRG+CF
Sbjct: 61  DWLYFGFDKTQYNVLEVNETSYDKCIDTDFITNVTKGGRDVFNLIDAKPYYFICGRGYCF 120

Query: 121 QGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSI 162
            GMKVAV V   +PP+ PP     SPS    +    +LLS+
Sbjct: 121 NGMKVAVNV-TVAPPLPPPPKKGGSPSSVGGVSQRMILLSL 160

[Close]

BLAST of Cla011066 vs. NCBI nr
Match: gi|702342540|ref|XP_010056606.1| (PREDICTED: lamin-like protein isoform X1 [Eucalyptus grandis])

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-47
Identity = 96/161 (59.63%), Postives = 117/161 (72.67%), Query Frame = 1


Query: 1   MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVG 60
           MLG   + V  +AV+ + G    G EGR+PVLHRVGGG+ TWTP++NFT+WS HE FYVG
Sbjct: 26  MLGFGEKVVMIVAVLVMLGVRGSGAEGRKPVLHRVGGGQNTWTPSVNFTNWSSHEQFYVG 85

Query: 61  DWLYFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCF 120
           DWLYFGFDK  YNVLEVN+TSY+ C D DFI N+T+GGRDVFNL +AK YYF+ GRG+CF
Sbjct: 86  DWLYFGFDKTQYNVLEVNETSYDKCIDTDFITNVTKGGRDVFNLIDAKPYYFICGRGYCF 145

Query: 121 QGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSI 162
            GMKVAV V   +PP+ PP     SPS    +    +LLS+
Sbjct: 146 NGMKVAVNV-TVAPPLPPPPKKGGSPSSVGGVSQRMILLSL 185

The following BLAST results are available for this feature:

BLAST of Cla011066 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LAML_ARATH	8.5e-26	53.85	Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1	[more]
ENL2_ARATH	7.3e-09	33.62	Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1	[more]
MAVI_CUCPE	8.9e-07	32.35	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]

BLAST of Cla011066 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A059C599_EUCGR	9.4e-48	59.63	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01880 PE=4 SV=1	[more]
G7J772_MEDTR	1.0e-46	68.22	Early nodulin-like protein OS=Medicago truncatula GN=MTR_3g117110 PE=4 SV=1	[more]
A0A067FSC1_CITSI	1.4e-46	60.37	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030501mg PE=4 SV=1	[more]
V4U6E0_9ROSI	1.8e-46	60.25	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016919mg PE=4 SV=1	[more]
A0A151TDQ0_CAJCA	3.0e-46	70.25	Lamin-like protein OS=Cajanus cajan GN=KK1_011355 PE=4 SV=1	[more]

BLAST of Cla011066 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100428\|ref\|XP_008451094.1\|	1.6e-72	82.25	PREDICTED: lamin-like protein [Cucumis melo]	[more]
gi\|1009113764\|ref\|XP_015873323.1\|	2.5e-49	67.81	PREDICTED: lamin-like protein [Ziziphus jujuba]	[more]
gi\|657986969\|ref\|XP_008385631.1\|	7.9e-48	65.54	PREDICTED: lamin-like protein [Malus domestica]	[more]
gi\|702342545\|ref\|XP_010056607.1\|	1.4e-47	59.63	PREDICTED: lamin-like protein isoform X2 [Eucalyptus grandis]	[more]
gi\|702342540\|ref\|XP_010056606.1\|	1.4e-47	59.63	PREDICTED: lamin-like protein isoform X1 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cla011066	Cla011066	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cla011066	Cla011066.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cla011066.1.cds2	Cla011066.1.cds2	CDS
Cla011066.1.cds1	Cla011066.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 65..129 score: 4.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 42..123 score: 1.1
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 31..131 score: 29
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 33..134 score: 2.5
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 32..129 score: 7.3
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 12..150 score: 1.6
None	No IPR available	PANTHER	PTHR33021:SF4	EARLY NODULIN-LIKE PROTEIN 20	coord: 12..150 score: 1.6